EY679594

Overview
NameEY679594
Unique NameEY679594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_PSEP1 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=lldD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.444e-16
Identity = 49/157 (31.21%), Postives = 71/157 (45.22%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREAD--------------IKNRFTLPPFLTLKNFQGL--DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQG 437
            RA+ AG K +  TVD P  G R  D              +    T P +       G   DLG + +   N +GLA Y+       D S+SWKD++W++     P+++KG+L A+D              SNHG RQLD V ++  AL  +  A +G
Sbjct:  143 RAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGKNGPLRRVLQAMTHPEWAWDVGVMGRPHDLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREFWDGPMIIKGILDADDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKG 299          

HSP 2 Score: 35.4242 bits (80), Expect = 6.444e-16
Identity = 18/60 (30.00%), Postives = 33/60 (55.00%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + I   + +    + G+ GV+ +LE+   E+
Sbjct:  297 VKGDLKILADSGIRSGLDVVRMIALGADTVLI-GRAFLYALAVHGQAGVKNLLELFEKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_PSEAE (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa GN=lldD PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.444e-16
Identity = 46/160 (28.75%), Postives = 70/160 (43.75%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMD--EANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +     N +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G ++
Sbjct:  143 RAKAAGVTTLVFTVDMPVPGARYRDAHSGMSGPYAAPRRILQAMTHPAWAWDVGLLGKPHDLGNISAYRGNPTGLEDYIGWLGANFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELA 302          

HSP 2 Score: 37.7354 bits (86), Expect = 6.444e-16
Identity = 19/60 (31.67%), Postives = 33/60 (55.00%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + V      G+ GVR +LE++  E+
Sbjct:  297 VKGELAILADSGIRTGLDVVRMIALGADSVLL-GRAFVYALAAAGEAGVRNLLELIEKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_PSEA8 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain LESB58) GN=lldD PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.444e-16
Identity = 46/160 (28.75%), Postives = 70/160 (43.75%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMD--EANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +     N +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G ++
Sbjct:  143 RAKAAGVTTLVFTVDMPVPGARYRDAHSGMSGPYAAPRRILQAMTHPAWAWDVGLLGKPHDLGNISAYRGNPTGLEDYIGWLGANFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELA 302          

HSP 2 Score: 37.7354 bits (86), Expect = 6.444e-16
Identity = 19/60 (31.67%), Postives = 33/60 (55.00%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + V      G+ GVR +LE++  E+
Sbjct:  297 VKGELAILADSGIRTGLDVVRMIALGADSVLL-GRAFVYALAAAGEAGVRNLLELIEKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_VIBPA (L-lactate dehydrogenase [cytochrome] OS=Vibrio parahaemolyticus GN=lldD PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.446e-16
Identity = 47/157 (29.94%), Postives = 71/157 (45.22%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQG-------LDLGKMDEANDSGLAAYVAGQ--------------IDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQG 437
            RA+ AG   +  TVD P  G R  D+ +  + P     + FQ        LD+G + + +D G  +   G+               D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G
Sbjct:  143 RAKAAGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAMRRVFQAMRHPSWALDVGLLGKPHDLGNISTYRGEPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMVIKGILDEEDAKDAVRFGADGIVVSNHGGRQLDGVLSTAKALPSIADAVKG 299          

HSP 2 Score: 34.6538 bits (78), Expect = 6.446e-16
Identity = 20/60 (33.33%), Postives = 32/60 (53.33%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +F+D G+R G DV + LALGA    +   S V     +G  GV  +L++   E+
Sbjct:  297 VKGDLKIFVDSGIRTGLDVVRMLALGADCTLL-GRSFVYALAAQGGAGVENLLDLYDKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: MDLB_PSEPU ((S)-mandelate dehydrogenase OS=Pseudomonas putida GN=mdlB PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 8.369e-16
Identity = 46/154 (29.87%), Postives = 69/154 (44.81%), Query Frame = 3
Query:   27 IRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQ--------GLD--------LGKMDEANDSGL---AAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKAT 431
            ++A   G+  + LT D    G RE D+ NRF +P   + K            LD        L     +  S L   AA ++ Q+D S +W+ ++WL+ +    +LVKG+L+AED              SNHG RQLD   + +  L + V  T
Sbjct:  143 LKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPMSYSAKVVLDGCLHPRWSLDFVRHGMPQLANFVSSQTSSLEMQAALMSRQMDASFNWEALRWLRDLWPHKLLVKGLLSAEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKT 296          

HSP 2 Score: 42.3578 bits (98), Expect = 8.369e-16
Identity = 22/55 (40.00%), Postives = 33/55 (60.00%), Query Frame = 1
Query:  445 PVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            PV +D G RRG+D+ KALALGA  + +   + +      G+ GV  VL +L+ +I
Sbjct:  299 PVLIDSGFRRGSDIVKALALGAEAVLLGRAT-LYGLAARGETGVDEVLTLLKADI 352          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPG (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain GB-1) GN=lldD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 8.375e-16
Identity = 49/157 (31.21%), Postives = 71/157 (45.22%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREAD--------------IKNRFTLPPFLTLKNFQGL--DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQG 437
            RA+ AG K +  TVD P  G R  D              +    T P +       G   DLG + +   N +GLA Y+       D S+SWKD++W++     P+++KG+L A+D              SNHG RQLD V ++  AL  +  A +G
Sbjct:  143 RAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGKNGPLRRVLQAMTHPEWAWDVGVMGRPHDLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREYWDGPMIIKGILDADDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKG 299          

HSP 2 Score: 35.4242 bits (80), Expect = 8.375e-16
Identity = 18/60 (30.00%), Postives = 33/60 (55.00%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + I   + +    + G+ GV+ +LE+   E+
Sbjct:  297 VKGDLKILADSGIRSGLDVVRMIALGADTVLI-GRAFLYALAVHGQAGVKNLLELFEKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_CAUSK (L-lactate dehydrogenase [cytochrome] OS=Caulobacter sp. (strain K31) GN=lldD PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.377e-16
Identity = 49/160 (30.63%), Postives = 70/160 (43.75%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSGLAAYVAGQ--------------IDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA  AG  A+  TVD P  G R  D  +  T P     +  Q +       D+G M   +  G  A V G+               D S+ WKD+ W++   K P+++KGVL  ED              SNHG RQLD V ++  AL ++ +A   R++
Sbjct:  143 RAADAGATALVFTVDMPVPGARYRDAHSGMTGPNAAMRRLVQAVFKPGWAWDVGVMGRPHTLGNVAPVLGENTGLEDFMGWLGANFDPSIQWKDLDWIRDQWKGPLILKGVLDPEDAKAAADIGADGIVVSNHGGRQLDGVLSSARALPDIAEAVGDRLT 302          

HSP 2 Score: 37.7354 bits (86), Expect = 8.377e-16
Identity = 21/54 (38.89%), Postives = 31/54 (57.41%), Query Frame = 1
Query:  448 VFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            V  DGGVR G DV + LALGA G+ +   + V      G  GV ++L+++  E+
Sbjct:  303 VLADGGVRSGLDVVRMLALGAKGVLL-GRAFVYALAARGGPGVSQLLDLIEKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_YERPY (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.089e-15
Identity = 49/160 (30.63%), Postives = 75/160 (46.88%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I+
Sbjct:  143 RAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDIT 302          

HSP 2 Score: 31.9574 bits (71), Expect = 1.089e-15
Identity = 17/60 (28.33%), Postives = 31/60 (51.67%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + V      G+ GV  +L ++  E+
Sbjct:  297 VKGDITILADSGIRTGLDVVRMIALGADSVLL-GRAFVYALATAGEAGVINLLTLIEQEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_YERPS (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis GN=lldD PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.089e-15
Identity = 49/160 (30.63%), Postives = 75/160 (46.88%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I+
Sbjct:  143 RAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDIT 302          

HSP 2 Score: 31.9574 bits (71), Expect = 1.089e-15
Identity = 17/60 (28.33%), Postives = 31/60 (51.67%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + V      G+ GV  +L ++  E+
Sbjct:  297 VKGDITILADSGIRTGLDVVRMIALGADSVLL-GRAFVYALATAGEAGVINLLTLIEQEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_YERPP (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis (strain Pestoides F) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.089e-15
Identity = 49/160 (30.63%), Postives = 75/160 (46.88%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I+
Sbjct:  143 RAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDIT 302          

HSP 2 Score: 31.9574 bits (71), Expect = 1.089e-15
Identity = 17/60 (28.33%), Postives = 31/60 (51.67%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + V      G+ GV  +L ++  E+
Sbjct:  297 VKGDITILADSGIRTGLDVVRMIALGADSVLL-GRAFVYALATAGEAGVINLLTLIEQEM 355          
The following BLAST results are available for this feature:
BLAST of EY679594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
LLDD_PSEP16.444e-1631.21L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEAE6.444e-1628.75L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEA86.444e-1628.75L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_VIBPA6.446e-1629.94L-lactate dehydrogenase [cytochrome] OS=Vibrio par... [more]
MDLB_PSEPU8.369e-1629.87(S)-mandelate dehydrogenase OS=Pseudomonas putida ... [more]
LLDD_PSEPG8.375e-1631.21L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_CAUSK8.377e-1630.63L-lactate dehydrogenase [cytochrome] OS=Caulobacte... [more]
LLDD_YERPY1.089e-1530.63L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPS1.089e-1530.63L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPP1.089e-1530.63L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-052-H09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679594 ID=EY679594; Name=EY679594; organism=Citrus sinensis; type=EST; length=896bp
CAGGAATGTGGTTGCTCAGCTTCTGTATAAGGGCTGAAAGAGCCGGATTC
AAGGCCATTGCTCTAACAGTTGATACCCCGAGGCTGGGTCGCAGAGAAGC
TGACATCAAGAACAGATTCACTCTACCACCATTTTTGACATTAAAGAATT
TTCAGGGTTTGGACCTTGGCAAGATGGACGAGGCAAATGACTCTGGGCTT
GCTGCCTATGTTGCTGGTCAAATTGATCGTTCTCTGAGCTGGAAGGACGT
GAAGTGGCTTCAAACAATCACCAAATTGCCAATTCTGGTGAAGGGTGTAC
TCACAGCAGAGGATGCGCGGATTGCAGTTCAAGCTGGAGCAGCTGGGATT
ATTGTATCCAATCATGGAGCTCGTCAACTTGACTATGTCCCTGCCACTAT
CATGGCCCTGGAAGAGGTTGTGAAAGCTACTCAGGGGCGTATTTCCTGTG
TTCTTGGATGGTGGTGTTAGGCGAGGAACTGATGTCTTCAAAGCATTGGC
ACTTGGAGCCTCTGGTATATTTATTTGGACGACCAGTGGTGTACTCATTT
GGCAGCTGGAGGGAAAGAAAGGGGTTAGAAGAGTACTCGAGATGCTGCGT
GGAGAAATTTTGAACTACCAATGGCACTAATGGGTTGCCGCTCACTCAAA
AAGAATTTACTCGGGATCACATCGTCCCTGAAAGGGGAAGCTTCCTCTCC
CTCCCCCCGGTTCCCAGGGTAAAAGTTCCCTGGCAGGGCAAATAAAAAAA
AAAAAACAAAAAATTTTGGGTTAACTTTTTTTTTAATTTCTTTTTTTTGG
GAAAAATTTGGTTTAGGGGTTTAATTGGGGTCCTGAAATTATTTTTTAAA
CCTTCCGGGTAAAAGAAGAAAATAAGGGGGCACCCTTCTGGCCCCC
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