EY679594

Overview
NameEY679594
Unique NameEY679594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_YERPN (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.089e-15
Identity = 49/160 (30.63%), Postives = 75/160 (46.88%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I+
Sbjct:  143 RAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDIT 302          

HSP 2 Score: 31.9574 bits (71), Expect = 1.089e-15
Identity = 17/60 (28.33%), Postives = 31/60 (51.67%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + V      G+ GV  +L ++  E+
Sbjct:  297 VKGDITILADSGIRTGLDVVRMIALGADSVLL-GRAFVYALATAGEAGVINLLTLIEQEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_YERPG (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Angola) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.089e-15
Identity = 49/160 (30.63%), Postives = 75/160 (46.88%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I+
Sbjct:  143 RAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDIT 302          

HSP 2 Score: 31.9574 bits (71), Expect = 1.089e-15
Identity = 17/60 (28.33%), Postives = 31/60 (51.67%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + V      G+ GV  +L ++  E+
Sbjct:  297 VKGDITILADSGIRTGLDVVRMIALGADSVLL-GRAFVYALATAGEAGVINLLTLIEQEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_YERPE (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis GN=lldD PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.089e-15
Identity = 49/160 (30.63%), Postives = 75/160 (46.88%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I+
Sbjct:  143 RAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDIT 302          

HSP 2 Score: 31.9574 bits (71), Expect = 1.089e-15
Identity = 17/60 (28.33%), Postives = 31/60 (51.67%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + V      G+ GV  +L ++  E+
Sbjct:  297 VKGDITILADSGIRTGLDVVRMIALGADSVLL-GRAFVYALATAGEAGVINLLTLIEQEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_YERPB (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.089e-15
Identity = 49/160 (30.63%), Postives = 75/160 (46.88%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I+
Sbjct:  143 RAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDIT 302          

HSP 2 Score: 31.9574 bits (71), Expect = 1.089e-15
Identity = 17/60 (28.33%), Postives = 31/60 (51.67%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + V      G+ GV  +L ++  E+
Sbjct:  297 VKGDITILADSGIRTGLDVVRMIALGADSVLL-GRAFVYALATAGEAGVINLLTLIEQEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_YERPA (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.089e-15
Identity = 49/160 (30.63%), Postives = 75/160 (46.88%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I+
Sbjct:  143 RAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDIT 302          

HSP 2 Score: 31.9574 bits (71), Expect = 1.089e-15
Identity = 17/60 (28.33%), Postives = 31/60 (51.67%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + V      G+ GV  +L ++  E+
Sbjct:  297 VKGDITILADSGIRTGLDVVRMIALGADSVLL-GRAFVYALATAGEAGVINLLTLIEQEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_YERP3 (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.089e-15
Identity = 49/160 (30.63%), Postives = 75/160 (46.88%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I+
Sbjct:  143 RAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDIT 302          

HSP 2 Score: 31.9574 bits (71), Expect = 1.089e-15
Identity = 17/60 (28.33%), Postives = 31/60 (51.67%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + V      G+ GV  +L ++  E+
Sbjct:  297 VKGDITILADSGIRTGLDVVRMIALGADSVLL-GRAFVYALATAGEAGVINLLTLIEQEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_SALCH (L-lactate dehydrogenase [cytochrome] OS=Salmonella choleraesuis GN=lldD PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.413e-15
Identity = 48/160 (30.00%), Postives = 72/160 (45.00%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG   +  TVD P  G R  D  +  + P    L+ +Q +                DLG +       +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I+
Sbjct:  143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMLRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIA 302          

HSP 2 Score: 33.8834 bits (76), Expect = 1.413e-15
Identity = 17/60 (28.33%), Postives = 32/60 (53.33%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + +      GK GV  +L+++  E+
Sbjct:  297 VKGDIAILADSGIRNGLDVVRMIALGADTVLL-GRAYLYALATAGKAGVANLLDLIEKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_PSEAB (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=lldD PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.415e-15
Identity = 45/160 (28.12%), Postives = 70/160 (43.75%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMD--EANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +     N +GL  Y+       D S++WKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G ++
Sbjct:  143 RAKAAGVTTLVFTVDMPVPGARYRDAHSGMSGPYAAPRRILQAMTHPAWAWDVGLLGKPHDLGNISAYRGNPTGLEDYIGWLGANFDPSIAWKDLEWIREFWDGPMVIKGILDPEDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELA 302          

HSP 2 Score: 37.7354 bits (86), Expect = 1.415e-15
Identity = 19/60 (31.67%), Postives = 33/60 (55.00%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + V      G+ GVR +LE++  E+
Sbjct:  297 VKGELAILADSGIRTGLDVVRMIALGADSVLL-GRAFVYALAAAGEAGVRNLLELIEKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_STRMK (L-lactate dehydrogenase [cytochrome] OS=Stenotrophomonas maltophilia (strain K279a) GN=lldD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.415e-15
Identity = 48/157 (30.57%), Postives = 69/157 (43.95%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMD--EANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQG 437
            RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +     N +GL  Y+       D S+SWKD++W++   K P+++KG+L  +D              SNHG RQLD V +T  AL  +  A QG
Sbjct:  143 RAQAAGVTTLVFTVDMPVPGARYRDAHSGMSGPNASLRRIGQAITHPHWAWDVGLFGRPHDLGNISTYRGNPTGLEDYIGWLGSNFDPSISWKDLEWIREFWKGPMVIKGILDPDDARDAVRFGADGIVVSNHGGRQLDGVLSTARALPAIADAVQG 299          

HSP 2 Score: 34.2686 bits (77), Expect = 1.415e-15
Identity = 18/60 (30.00%), Postives = 33/60 (55.00%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + LALGA  + +   + V     +G+ GV  +L+++  E+
Sbjct:  297 VQGDLKILADSGIRTGLDVVRMLALGADTVLL-GRAFVYALAAQGEAGVANLLDLIAKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_STRM5 (L-lactate dehydrogenase [cytochrome] OS=Stenotrophomonas maltophilia (strain R551-3) GN=lldD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.415e-15
Identity = 48/157 (30.57%), Postives = 69/157 (43.95%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMD--EANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQG 437
            RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +     N +GL  Y+       D S+SWKD++W++   K P+++KG+L  +D              SNHG RQLD V +T  AL  +  A QG
Sbjct:  143 RAQAAGVTTLVFTVDMPVPGARYRDAHSGMSGPNASLRRIGQAITHPHWAWDVGLFGRPHDLGNISTYRGNPTGLEDYIGWLGSNFDPSISWKDLEWIREFWKGPMVIKGILDPDDARDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVQG 299          

HSP 2 Score: 34.2686 bits (77), Expect = 1.415e-15
Identity = 18/60 (30.00%), Postives = 33/60 (55.00%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + LALGA  + +   + V     +G+ GV  +L+++  E+
Sbjct:  297 VQGDLKILADSGIRTGLDVVRMLALGADTVLL-GRAFVYALAAQGEAGVANLLDLIAKEM 355          
The following BLAST results are available for this feature:
BLAST of EY679594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
LLDD_YERPN1.089e-1530.63L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPG1.089e-1530.63L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPE1.089e-1530.63L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPB1.089e-1530.63L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPA1.089e-1530.63L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERP31.089e-1530.63L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_SALCH1.413e-1530.00L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_PSEAB1.415e-1528.13L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_STRMK1.415e-1530.57L-lactate dehydrogenase [cytochrome] OS=Stenotroph... [more]
LLDD_STRM51.415e-1530.57L-lactate dehydrogenase [cytochrome] OS=Stenotroph... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-052-H09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679594 ID=EY679594; Name=EY679594; organism=Citrus sinensis; type=EST; length=896bp
CAGGAATGTGGTTGCTCAGCTTCTGTATAAGGGCTGAAAGAGCCGGATTC
AAGGCCATTGCTCTAACAGTTGATACCCCGAGGCTGGGTCGCAGAGAAGC
TGACATCAAGAACAGATTCACTCTACCACCATTTTTGACATTAAAGAATT
TTCAGGGTTTGGACCTTGGCAAGATGGACGAGGCAAATGACTCTGGGCTT
GCTGCCTATGTTGCTGGTCAAATTGATCGTTCTCTGAGCTGGAAGGACGT
GAAGTGGCTTCAAACAATCACCAAATTGCCAATTCTGGTGAAGGGTGTAC
TCACAGCAGAGGATGCGCGGATTGCAGTTCAAGCTGGAGCAGCTGGGATT
ATTGTATCCAATCATGGAGCTCGTCAACTTGACTATGTCCCTGCCACTAT
CATGGCCCTGGAAGAGGTTGTGAAAGCTACTCAGGGGCGTATTTCCTGTG
TTCTTGGATGGTGGTGTTAGGCGAGGAACTGATGTCTTCAAAGCATTGGC
ACTTGGAGCCTCTGGTATATTTATTTGGACGACCAGTGGTGTACTCATTT
GGCAGCTGGAGGGAAAGAAAGGGGTTAGAAGAGTACTCGAGATGCTGCGT
GGAGAAATTTTGAACTACCAATGGCACTAATGGGTTGCCGCTCACTCAAA
AAGAATTTACTCGGGATCACATCGTCCCTGAAAGGGGAAGCTTCCTCTCC
CTCCCCCCGGTTCCCAGGGTAAAAGTTCCCTGGCAGGGCAAATAAAAAAA
AAAAAACAAAAAATTTTGGGTTAACTTTTTTTTTAATTTCTTTTTTTTGG
GAAAAATTTGGTTTAGGGGTTTAATTGGGGTCCTGAAATTATTTTTTAAA
CCTTCCGGGTAAAAGAAGAAAATAAGGGGGCACCCTTCTGGCCCCC
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