EY679594

Overview
NameEY679594
Unique NameEY679594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_ACIAD (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter sp. (strain ADP1) GN=lldD PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.850e-15
Identity = 44/160 (27.50%), Postives = 73/160 (45.62%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEAND-----------SGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G +   +D           +GL  Y++      D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  A+  + +A +G ++
Sbjct:  143 RAKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRYLQSMMHPQWAWDVGLLGRPHDLGNISKYLGKTTGLEDYISWLGSNFDPSISWKDLEWIREFWDGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGVMSSARAMPAIAEAVKGDLT 302          

HSP 2 Score: 34.6538 bits (78), Expect = 8.850e-15
Identity = 17/60 (28.33%), Postives = 33/60 (55.00%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + LALGA  + +   + +     +G +GV  +L+++  E+
Sbjct:  297 VKGDLTILADSGIRNGLDVVRMLALGADSVML-GRAFIYALAAQGGQGVSNLLDLIDKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_AZOC5 (L-lactate dehydrogenase [cytochrome] OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=lldD PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.854e-15
Identity = 47/154 (30.52%), Postives = 70/154 (45.45%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQG-------LDLGKMDEANDSG-----------LAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKA 428
            RA+ AG   +  TVD P  G R  D  +  +     T +  Q        LD+G + + +D G           LA Y+   A   D S+SWKD++W+++  K P+++KG+L   D              SNHG RQLD V ++  AL  +  A
Sbjct:  143 RAQAAGINTLIFTVDMPVPGARYRDAHSGMSGRSGPTRRVLQAMVHPRWALDVGLLGKPHDLGNISTYRGKPTNLADYIGWLAANFDPSISWKDLEWIRSFWKGPMIIKGILDPVDARDAVAFGADGIVVSNHGGRQLDGVLSSARALPAIADA 296          

HSP 2 Score: 35.8094 bits (81), Expect = 8.854e-15
Identity = 18/54 (33.33%), Postives = 29/54 (53.70%), Query Frame = 1
Query:  448 VFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            V  D G+R G DV + LALGA G+ +       +    G+ GV  +L+++  E+
Sbjct:  303 VLADSGIRTGLDVVRMLALGAKGVLLGRAFAYAL-ATHGQAGVANLLDLIEKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_ESCF3 (L-lactate dehydrogenase [cytochrome] OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=lldD PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.149e-14
Identity = 47/160 (29.38%), Postives = 71/160 (44.38%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG   +  TVD P  G R  D  +  + P     + +Q +                DLG +       +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I+
Sbjct:  143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIA 302          

HSP 2 Score: 33.113 bits (74), Expect = 1.149e-14
Identity = 17/60 (28.33%), Postives = 31/60 (51.67%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + +      GK GV  +L ++  E+
Sbjct:  297 VKGDIAILADSGIRNGLDVVRMIALGADTVLL-GRAYLYALATAGKAGVANLLNLIEKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_SALPC (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi C (strain RKS4594) GN=lldD PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.149e-14
Identity = 47/160 (29.38%), Postives = 71/160 (44.38%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG   +  TVD P  G R  D  +  + P     + +Q +                DLG +       +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I+
Sbjct:  143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGLLDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIA 302          

HSP 2 Score: 33.8834 bits (76), Expect = 1.149e-14
Identity = 17/60 (28.33%), Postives = 32/60 (53.33%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + +      GK GV  +L+++  E+
Sbjct:  297 VKGDIAILADSGIRNGLDVVRMIALGADTVLL-GRAYLYALATAGKAGVANLLDLIEKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_CITK8 (L-lactate dehydrogenase [cytochrome] OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=lldD PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.940e-14
Identity = 47/160 (29.38%), Postives = 70/160 (43.75%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG   +  TVD P  G R  D  +  + P     + +Q                  DLG +       +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I+
Sbjct:  143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAALRRYWQAATHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIA 302          

HSP 2 Score: 33.113 bits (74), Expect = 1.940e-14
Identity = 16/60 (26.67%), Postives = 32/60 (53.33%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + +      G+ GV  +L+++  E+
Sbjct:  297 VKGDIAILADSGIRNGLDVVRMIALGADSVLL-GRAYLYALATAGQAGVANLLDLIEKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD1_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 1 OS=Mycobacterium tuberculosis GN=lldD1 PE=3 SV=2)

HSP 1 Score: 50.447 bits (119), Expect = 1.940e-14
Identity = 32/110 (29.09%), Postives = 47/110 (42.73%), Query Frame = 3
Query:  126 PPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRISCVL 455
            PP L + N      G+  E      AAY         +W+D+ WL+ +   P ++KGV+  +D              SNHG   LD  PA+I AL  V  A   ++  +L
Sbjct:  204 PPDLRVPN-----QGRRGEPGPPFFAAYGEWMATPPPTWEDIGWLRELWGGPFMLKGVMRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRALPAVSAAVGDQVEVLL 308          

HSP 2 Score: 50.0618 bits (118), Expect = 1.940e-14
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 1
Query:  448 VFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQL--EGKKGVRRVLEMLRGEI 609
            V LDGG+RRG+DV KA+ALGA  + I       +W L   G+ GV  VL++LRG I
Sbjct:  306 VLLDGGIRRGSDVVKAVALGARAVMI---GRAYLWGLAANGQAGVENVLDILRGGI 358          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_XANAC (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas axonopodis pv. citri GN=lldD PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.941e-14
Identity = 44/159 (27.67%), Postives = 72/159 (45.28%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRI 443
            RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G + + +D G ++AY             +    D S++WKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G +
Sbjct:  143 RAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAVTHPRWAWDVGLLGKPHDLGNISAYRGSPTGLQDYIGWLGANFDPSIAWKDLEWIREFWTGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGEL 301          

HSP 2 Score: 34.2686 bits (77), Expect = 1.941e-14
Identity = 18/60 (30.00%), Postives = 31/60 (51.67%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + LALGA  + +   + V      G+ GV  +L ++  E+
Sbjct:  297 VKGELKILADSGIRSGLDVVRMLALGADAVLL-GRAFVYALAAAGQAGVENLLTLIEKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIG (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain PittGG) GN=lldD PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.942e-14
Identity = 47/162 (29.01%), Postives = 74/162 (45.68%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAYVAGQI-------------DRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRISCV 452
            RA+ AG   +  TVD P  G R  D+ +  + P     +  QG        D+G   + +  G ++ Y+  QI             D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I  +
Sbjct:  143 RAKAAGCSTLVFTVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTLGNVSTYMGRQIGLDDYIGWLTENFDPSISWKDLEWIREFWEGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGVLSSARALPPIADAVKGDIKII 304          

HSP 2 Score: 33.8834 bits (76), Expect = 1.942e-14
Identity = 17/60 (28.33%), Postives = 32/60 (53.33%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G D+ + LALGA    +   + V      G++GV  +L++ + E+
Sbjct:  297 VKGDIKIIADSGIRNGLDIVRMLALGADATML-GRAFVYALGAAGRQGVENMLDIFKKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIE (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain PittEE) GN=lldD PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.942e-14
Identity = 47/162 (29.01%), Postives = 74/162 (45.68%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAYVAGQI-------------DRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRISCV 452
            RA+ AG   +  TVD P  G R  D+ +  + P     +  QG        D+G   + +  G ++ Y+  QI             D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I  +
Sbjct:  143 RAKAAGCSTLVFTVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTLGNVSTYMGRQIGLDDYIGWLTENFDPSISWKDLEWIREFWEGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGVLSSARALPPIADAVKGDIKII 304          

HSP 2 Score: 33.8834 bits (76), Expect = 1.942e-14
Identity = 17/60 (28.33%), Postives = 32/60 (53.33%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G D+ + LALGA    +   + V      G++GV  +L++ + E+
Sbjct:  297 VKGDIKIIADSGIRNGLDIVRMLALGADATML-GRAFVYALGAAGRQGVENMLDIFKKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_HAEI8 (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain 86-028NP) GN=lldD PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.942e-14
Identity = 47/162 (29.01%), Postives = 74/162 (45.68%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAYVAGQI-------------DRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRISCV 452
            RA+ AG   +  TVD P  G R  D+ +  + P     +  QG        D+G   + +  G ++ Y+  QI             D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I  +
Sbjct:  143 RAKAAGCSTLVFTVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTLGNVSTYMGRQIGLDDYIGWLTENFDPSISWKDLEWIREFWEGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGVLSSARALPPIADAVKGDIKII 304          

HSP 2 Score: 33.8834 bits (76), Expect = 1.942e-14
Identity = 17/60 (28.33%), Postives = 32/60 (53.33%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G D+ + LALGA    +   + V      G++GV  +L++ + E+
Sbjct:  297 VKGDIKIIADSGIRNGLDIVRMLALGADATML-GRAFVYALGAAGRQGVENMLDIFKKEM 355          
The following BLAST results are available for this feature:
BLAST of EY679594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
LLDD_ACIAD8.850e-1527.50L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_AZOC58.854e-1530.52L-lactate dehydrogenase [cytochrome] OS=Azorhizobi... [more]
LLDD_ESCF31.149e-1429.38L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_SALPC1.149e-1429.38L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_CITK81.940e-1429.38L-lactate dehydrogenase [cytochrome] OS=Citrobacte... [more]
LLDD1_MYCTU1.940e-1429.09Putative L-lactate dehydrogenase [cytochrome] 1 OS... [more]
LLDD_XANAC1.941e-1427.67L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_HAEIG1.942e-1429.01L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_HAEIE1.942e-1429.01L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_HAEI81.942e-1429.01L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-052-H09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679594 ID=EY679594; Name=EY679594; organism=Citrus sinensis; type=EST; length=896bp
CAGGAATGTGGTTGCTCAGCTTCTGTATAAGGGCTGAAAGAGCCGGATTC
AAGGCCATTGCTCTAACAGTTGATACCCCGAGGCTGGGTCGCAGAGAAGC
TGACATCAAGAACAGATTCACTCTACCACCATTTTTGACATTAAAGAATT
TTCAGGGTTTGGACCTTGGCAAGATGGACGAGGCAAATGACTCTGGGCTT
GCTGCCTATGTTGCTGGTCAAATTGATCGTTCTCTGAGCTGGAAGGACGT
GAAGTGGCTTCAAACAATCACCAAATTGCCAATTCTGGTGAAGGGTGTAC
TCACAGCAGAGGATGCGCGGATTGCAGTTCAAGCTGGAGCAGCTGGGATT
ATTGTATCCAATCATGGAGCTCGTCAACTTGACTATGTCCCTGCCACTAT
CATGGCCCTGGAAGAGGTTGTGAAAGCTACTCAGGGGCGTATTTCCTGTG
TTCTTGGATGGTGGTGTTAGGCGAGGAACTGATGTCTTCAAAGCATTGGC
ACTTGGAGCCTCTGGTATATTTATTTGGACGACCAGTGGTGTACTCATTT
GGCAGCTGGAGGGAAAGAAAGGGGTTAGAAGAGTACTCGAGATGCTGCGT
GGAGAAATTTTGAACTACCAATGGCACTAATGGGTTGCCGCTCACTCAAA
AAGAATTTACTCGGGATCACATCGTCCCTGAAAGGGGAAGCTTCCTCTCC
CTCCCCCCGGTTCCCAGGGTAAAAGTTCCCTGGCAGGGCAAATAAAAAAA
AAAAAACAAAAAATTTTGGGTTAACTTTTTTTTTAATTTCTTTTTTTTGG
GAAAAATTTGGTTTAGGGGTTTAATTGGGGTCCTGAAATTATTTTTTAAA
CCTTCCGGGTAAAAGAAGAAAATAAGGGGGCACCCTTCTGGCCCCC
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