EY679594

Overview
NameEY679594
Unique NameEY679594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_ACIB3 (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain AB307-0294) GN=lldD PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 5.532e-14
Identity = 45/160 (28.12%), Postives = 70/160 (43.75%), Query Frame = 3 
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG + +     +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G ++
Sbjct:  143 RAKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRYMQSVFHPHWSWNVGLMGRPHDLGNISKYLGKPTGLEDYIGWLGSNFDPSISWKDLEWIREFWDGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGVMSSARALPAIADAVKGDLA 302

HSP 2 Score: 33.113 bits (74), Expect = 5.532e-14
Identity = 18/60 (30.00%), Postives = 32/60 (53.33%), Query Frame = 1 
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + LALGA  + +   + V      G +GV  +L+++  E+
Sbjct:  297 VKGDLAILADSGIRNGLDVVRMLALGADTVLL-GRAFVYALAAAGGQGVSNLLDLIDKEM 355
[Close]
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_ECO81 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O81 (strain ED1a) GN=lldD PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.326e-14
Identity = 46/160 (28.75%), Postives = 69/160 (43.12%), Query Frame = 3 
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +       +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I+
Sbjct:  143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIA 302

HSP 2 Score: 31.9574 bits (71), Expect = 9.326e-14
Identity = 17/60 (28.33%), Postives = 31/60 (51.67%), Query Frame = 1 
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  I +   + +      G+ GV  +L ++  E+
Sbjct:  297 VKGDIAILADSGIRNGLDVVRMIALGADTILL-GRAFLYALATAGQAGVANLLNLIEKEM 355
[Close]
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_SHISS (L-lactate dehydrogenase [cytochrome] OS=Shigella sonnei (strain Ss046) GN=lldD PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.211e-13
Identity = 46/160 (28.75%), Postives = 69/160 (43.12%), Query Frame = 3 
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +       +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I+
Sbjct:  143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIA 302

HSP 2 Score: 31.5722 bits (70), Expect = 1.211e-13
Identity = 16/60 (26.67%), Postives = 31/60 (51.67%), Query Frame = 1 
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + +      G+ GV  +L ++  E+
Sbjct:  297 VKGDIAILADSGIRNGLDVVRMIALGADTVLL-GRAFLYALATAGQAGVANLLNLIEKEM 355
[Close]
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_SHIFL (L-lactate dehydrogenase [cytochrome] OS=Shigella flexneri GN=lldD PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.211e-13
Identity = 46/160 (28.75%), Postives = 69/160 (43.12%), Query Frame = 3 
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +       +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I+
Sbjct:  143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIA 302

HSP 2 Score: 31.5722 bits (70), Expect = 1.211e-13
Identity = 16/60 (26.67%), Postives = 31/60 (51.67%), Query Frame = 1 
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + +      G+ GV  +L ++  E+
Sbjct:  297 VKGDIAILADSGIRNGLDVVRMIALGADTVLL-GRAFLYALATAGQAGVANLLNLIEKEM 355
[Close]
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_SHIF8 (L-lactate dehydrogenase [cytochrome] OS=Shigella flexneri serotype 5b (strain 8401) GN=lldD PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.211e-13
Identity = 46/160 (28.75%), Postives = 69/160 (43.12%), Query Frame = 3 
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +       +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I+
Sbjct:  143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIA 302

HSP 2 Score: 31.5722 bits (70), Expect = 1.211e-13
Identity = 16/60 (26.67%), Postives = 31/60 (51.67%), Query Frame = 1 
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + +      G+ GV  +L ++  E+
Sbjct:  297 VKGDIAILADSGIRNGLDVVRMIALGADTVLL-GRAFLYALATAGQAGVANLLNLIEKEM 355
[Close]
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_SHIDS (L-lactate dehydrogenase [cytochrome] OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=lldD PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.211e-13
Identity = 46/160 (28.75%), Postives = 69/160 (43.12%), Query Frame = 3 
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +       +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I+
Sbjct:  143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIA 302

HSP 2 Score: 31.5722 bits (70), Expect = 1.211e-13
Identity = 16/60 (26.67%), Postives = 31/60 (51.67%), Query Frame = 1 
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + +      G+ GV  +L ++  E+
Sbjct:  297 VKGDIAILADSGIRNGLDVVRMIALGADTVLL-GRAFLYALATAGQAGVANLLNLIEKEM 355
[Close]
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_SHIBS (L-lactate dehydrogenase [cytochrome] OS=Shigella boydii serotype 4 (strain Sb227) GN=lldD PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.211e-13
Identity = 46/160 (28.75%), Postives = 69/160 (43.12%), Query Frame = 3 
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +       +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I+
Sbjct:  143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIA 302

HSP 2 Score: 31.5722 bits (70), Expect = 1.211e-13
Identity = 16/60 (26.67%), Postives = 31/60 (51.67%), Query Frame = 1 
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + +      G+ GV  +L ++  E+
Sbjct:  297 VKGDIAILADSGIRNGLDVVRMIALGADTVLL-GRAFLYALATAGQAGVANLLNLIEKEM 355
[Close]
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_SHIB3 (L-lactate dehydrogenase [cytochrome] OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=lldD PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.211e-13
Identity = 46/160 (28.75%), Postives = 69/160 (43.12%), Query Frame = 3 
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +       +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I+
Sbjct:  143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIA 302

HSP 2 Score: 31.5722 bits (70), Expect = 1.211e-13
Identity = 16/60 (26.67%), Postives = 31/60 (51.67%), Query Frame = 1 
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + +      G+ GV  +L ++  E+
Sbjct:  297 VKGDIAILADSGIRNGLDVVRMIALGADTVLL-GRAFLYALATAGQAGVANLLNLIEKEM 355
[Close]
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_ECOSM (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.211e-13
Identity = 46/160 (28.75%), Postives = 69/160 (43.12%), Query Frame = 3 
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +       +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I+
Sbjct:  143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIA 302

HSP 2 Score: 31.5722 bits (70), Expect = 1.211e-13
Identity = 16/60 (26.67%), Postives = 31/60 (51.67%), Query Frame = 1 
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + +      G+ GV  +L ++  E+
Sbjct:  297 VKGDIAILADSGIRNGLDVVRMIALGADTVLL-GRAFLYALATAGQAGVANLLNLIEKEM 355
[Close]
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_ECOSE (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain SE11) GN=lldD PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.211e-13
Identity = 46/160 (28.75%), Postives = 69/160 (43.12%), Query Frame = 3 
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +       +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I+
Sbjct:  143 RAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIA 302

HSP 2 Score: 31.5722 bits (70), Expect = 1.211e-13
Identity = 16/60 (26.67%), Postives = 31/60 (51.67%), Query Frame = 1 
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + +      G+ GV  +L ++  E+
Sbjct:  297 VKGDIAILADSGIRNGLDVVRMIALGADTVLL-GRAFLYALATAGQAGVANLLNLIEKEM 355
The following BLAST results are available for this feature:
BLAST of EY679594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
LLDD_ACIB35.532e-1428.13L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_ECO819.326e-1428.75L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_SHISS1.211e-1328.75L-lactate dehydrogenase [cytochrome] OS=Shigella s... [more]
LLDD_SHIFL1.211e-1328.75L-lactate dehydrogenase [cytochrome] OS=Shigella f... [more]
LLDD_SHIF81.211e-1328.75L-lactate dehydrogenase [cytochrome] OS=Shigella f... [more]
LLDD_SHIDS1.211e-1328.75L-lactate dehydrogenase [cytochrome] OS=Shigella d... [more]
LLDD_SHIBS1.211e-1328.75L-lactate dehydrogenase [cytochrome] OS=Shigella b... [more]
LLDD_SHIB31.211e-1328.75L-lactate dehydrogenase [cytochrome] OS=Shigella b... [more]
LLDD_ECOSM1.211e-1328.75L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOSE1.211e-1328.75L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-052-H09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679594 ID=EY679594; Name=EY679594; organism=Citrus sinensis; type=EST; length=896bp
CAGGAATGTGGTTGCTCAGCTTCTGTATAAGGGCTGAAAGAGCCGGATTC
AAGGCCATTGCTCTAACAGTTGATACCCCGAGGCTGGGTCGCAGAGAAGC
TGACATCAAGAACAGATTCACTCTACCACCATTTTTGACATTAAAGAATT
TTCAGGGTTTGGACCTTGGCAAGATGGACGAGGCAAATGACTCTGGGCTT
GCTGCCTATGTTGCTGGTCAAATTGATCGTTCTCTGAGCTGGAAGGACGT
GAAGTGGCTTCAAACAATCACCAAATTGCCAATTCTGGTGAAGGGTGTAC
TCACAGCAGAGGATGCGCGGATTGCAGTTCAAGCTGGAGCAGCTGGGATT
ATTGTATCCAATCATGGAGCTCGTCAACTTGACTATGTCCCTGCCACTAT
CATGGCCCTGGAAGAGGTTGTGAAAGCTACTCAGGGGCGTATTTCCTGTG
TTCTTGGATGGTGGTGTTAGGCGAGGAACTGATGTCTTCAAAGCATTGGC
ACTTGGAGCCTCTGGTATATTTATTTGGACGACCAGTGGTGTACTCATTT
GGCAGCTGGAGGGAAAGAAAGGGGTTAGAAGAGTACTCGAGATGCTGCGT
GGAGAAATTTTGAACTACCAATGGCACTAATGGGTTGCCGCTCACTCAAA
AAGAATTTACTCGGGATCACATCGTCCCTGAAAGGGGAAGCTTCCTCTCC
CTCCCCCCGGTTCCCAGGGTAAAAGTTCCCTGGCAGGGCAAATAAAAAAA
AAAAAACAAAAAATTTTGGGTTAACTTTTTTTTTAATTTCTTTTTTTTGG
GAAAAATTTGGTTTAGGGGTTTAATTGGGGTCCTGAAATTATTTTTTAAA
CCTTCCGGGTAAAAGAAGAAAATAAGGGGGCACCCTTCTGGCCCCC
back to top