EY679573

Overview
NameEY679573
Unique NameEY679573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1054
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_XANC5 (Thiazole biosynthesis protein thiG OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=thiG PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.945e-44
Identity = 90/130 (69.23%), Postives = 109/130 (83.85%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F   VY +DDPI  + LE++G VAVMPLA+ IGSG+GI N +NL  IID A+VP++VDAGVGTASDAAIAMELGCD VLMNTAIA ARDP+LMASAM+K +E+GREAFLAGR+P+K Y+ A SSP +G+I
Sbjct:  135 FEVMVYTSDDPILAKRLEEIGCVAVMPLAAPIGSGLGIQNKYNLLEIIDNAKVPIIVDAGVGTASDAAIAMELGCDGVLMNTAIAGARDPILMASAMRKAIEAGREAFLAGRIPRKRYASA-SSPVDGVI 263          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_XANAC (Thiazole biosynthesis protein thiG OS=Xanthomonas axonopodis pv. citri GN=thiG PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.945e-44
Identity = 90/130 (69.23%), Postives = 109/130 (83.85%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F   VY +DDPI  + LED+G VAVMPLA+ IGSG+GI N +NL  II+ A+VP++VDAGVGTASDAAIAMELGCD VLMNTAIA ARDP+LMASAM+K +E+GREAFLAGR+P+K Y+ A SSP +G+I
Sbjct:  135 FEVMVYTSDDPILAKRLEDIGCVAVMPLAAPIGSGLGIQNKYNLLEIIENAKVPIIVDAGVGTASDAAIAMELGCDGVLMNTAIAGARDPILMASAMRKAIEAGREAFLAGRIPRKRYASA-SSPVDGVI 263          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_PSEAE (Thiazole biosynthesis protein thiG OS=Pseudomonas aeruginosa GN=thiG PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 6.459e-44
Identity = 93/151 (61.59%), Postives = 119/151 (78.81%), Query Frame = -2
Query:  118 TLFPKHARKPSRPPRRVGMRAFRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 570
            TLFP +  +  +   ++    F   VY +DDPI  R L ++G +AVMPLA LIGSG+GI NP+NLR+I+++A+VPV+VDAGVGTASDAAIAMELGC+AVLMNTAIA A+DPV+MA AMK  + +GR A+LAGRMP+KLY+ A SSP +GLI
Sbjct:  116 TLFP-NVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAIVAGRLAYLAGRMPRKLYASA-SSPLDGLI 264          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_PSEAB (Thiazole biosynthesis protein thiG OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=thiG PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 6.459e-44
Identity = 93/151 (61.59%), Postives = 119/151 (78.81%), Query Frame = -2
Query:  118 TLFPKHARKPSRPPRRVGMRAFRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 570
            TLFP +  +  +   ++    F   VY +DDPI  R L ++G +AVMPLA LIGSG+GI NP+NLR+I+++A+VPV+VDAGVGTASDAAIAMELGC+AVLMNTAIA A+DPV+MA AMK  + +GR A+LAGRMP+KLY+ A SSP +GLI
Sbjct:  116 TLFP-NVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAIVAGRLAYLAGRMPRKLYASA-SSPLDGLI 264          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_PSEA8 (Thiazole biosynthesis protein thiG OS=Pseudomonas aeruginosa (strain LESB58) GN=thiG PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 6.459e-44
Identity = 93/151 (61.59%), Postives = 119/151 (78.81%), Query Frame = -2
Query:  118 TLFPKHARKPSRPPRRVGMRAFRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 570
            TLFP +  +  +   ++    F   VY +DDPI  R L ++G +AVMPLA LIGSG+GI NP+NLR+I+++A+VPV+VDAGVGTASDAAIAMELGC+AVLMNTAIA A+DPV+MA AMK  + +GR A+LAGRMP+KLY+ A SSP +GLI
Sbjct:  116 TLFP-NVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAIVAGRLAYLAGRMPRKLYASA-SSPLDGLI 264          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_AZOVD (Thiazole biosynthesis protein thiG OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=thiG PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 8.435e-44
Identity = 91/130 (70.00%), Postives = 109/130 (83.85%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F   VY +DDPI  R L +MG +AVMPLA LIG+G+GI NP+NLR+I+++A VPV+VDAGVGTASDA IAMELGC+AVLMN+AIA A+DPVLMA AMK  +E+GR A+LAGRMPKKLY+ A SSP EGLI
Sbjct:  135 FDVMVYTSDDPIIARQLAEMGCIAVMPLAGLIGTGLGICNPYNLRIILEEATVPVLVDAGVGTASDATIAMELGCEAVLMNSAIAHAQDPVLMARAMKHAIEAGRLAWLAGRMPKKLYASA-SSPLEGLI 263          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_XANOR (Thiazole biosynthesis protein thiG OS=Xanthomonas oryzae pv. oryzae GN=thiG PE=3 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 1.439e-43
Identity = 89/130 (68.46%), Postives = 109/130 (83.85%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F   VY +DDPI  + LE++G VAVMPLA+ IGSG+GI N +NL  II+ A+VP++VDAGVGTASDAAIAMELGCD VLMNTAIA ARDP+LMASAM+K +E+GREAFLAGR+P+K Y+ A SSP +G+I
Sbjct:  135 FEVMVYTSDDPILAKRLEEIGCVAVMPLAAPIGSGLGIQNKYNLLEIIENAKVPIIVDAGVGTASDAAIAMELGCDGVLMNTAIAGARDPILMASAMRKAIEAGREAFLAGRIPRKRYASA-SSPVDGVI 263          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_XANOP (Thiazole biosynthesis protein thiG OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=thiG PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.439e-43
Identity = 89/130 (68.46%), Postives = 109/130 (83.85%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F   VY +DDPI  + LE++G VAVMPLA+ IGSG+GI N +NL  II+ A+VP++VDAGVGTASDAAIAMELGCD VLMNTAIA ARDP+LMASAM+K +E+GREAFLAGR+P+K Y+ A SSP +G+I
Sbjct:  135 FEVMVYTSDDPILAKRLEEIGCVAVMPLAAPIGSGLGIQNKYNLLEIIENAKVPIIVDAGVGTASDAAIAMELGCDGVLMNTAIAGARDPILMASAMRKAIEAGREAFLAGRIPRKRYASA-SSPVDGVI 263          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_XANOM (Thiazole biosynthesis protein thiG OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=thiG PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.439e-43
Identity = 89/130 (68.46%), Postives = 109/130 (83.85%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F   VY +DDPI  + LE++G VAVMPLA+ IGSG+GI N +NL  II+ A+VP++VDAGVGTASDAAIAMELGCD VLMNTAIA ARDP+LMASAM+K +E+GREAFLAGR+P+K Y+ A SSP +G+I
Sbjct:  135 FEVMVYTSDDPILAKRLEEIGCVAVMPLAAPIGSGLGIQNKYNLLEIIENAKVPIIVDAGVGTASDAAIAMELGCDGVLMNTAIAGARDPILMASAMRKAIEAGREAFLAGRIPRKRYASA-SSPVDGVI 263          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_XANCP (Thiazole biosynthesis protein thiG OS=Xanthomonas campestris pv. campestris GN=thiG PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.439e-43
Identity = 89/130 (68.46%), Postives = 109/130 (83.85%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F   VY +DDPI  + LE++G VAVMPLA+ IGSG+GI N +NL  II+ A+VP++VDAGVGTASDAAIAMELGCD VLMNTAIA ARDP+LMASAM+K +E+GREAFLAGR+P+K Y+ A SSP +G+I
Sbjct:  135 FEVMVYTSDDPILAKRLEEIGCVAVMPLAAPIGSGLGIQNKYNLLEIIENAKVPIIVDAGVGTASDAAIAMELGCDGVLMNTAIAGARDPILMASAMRKAIEAGREAFLAGRIPRKRYASA-SSPVDGVI 263          
The following BLAST results are available for this feature:
BLAST of EY679573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 398
Match NameE-valueIdentityDescription
THIG_XANC54.945e-4469.23Thiazole biosynthesis protein thiG OS=Xanthomonas ... [more]
THIG_XANAC4.945e-4469.23Thiazole biosynthesis protein thiG OS=Xanthomonas ... [more]
THIG_PSEAE6.459e-4461.59Thiazole biosynthesis protein thiG OS=Pseudomonas ... [more]
THIG_PSEAB6.459e-4461.59Thiazole biosynthesis protein thiG OS=Pseudomonas ... [more]
THIG_PSEA86.459e-4461.59Thiazole biosynthesis protein thiG OS=Pseudomonas ... [more]
THIG_AZOVD8.435e-4470.00Thiazole biosynthesis protein thiG OS=Azotobacter ... [more]
THIG_XANOR1.439e-4368.46Thiazole biosynthesis protein thiG OS=Xanthomonas ... [more]
THIG_XANOP1.439e-4368.46Thiazole biosynthesis protein thiG OS=Xanthomonas ... [more]
THIG_XANOM1.439e-4368.46Thiazole biosynthesis protein thiG OS=Xanthomonas ... [more]
THIG_XANCP1.439e-4368.46Thiazole biosynthesis protein thiG OS=Xanthomonas ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-052-F12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679573 ID=EY679573; Name=EY679573; organism=Citrus sinensis; type=EST; length=1054bp
CCGGTAACGGGTCGGGAATTCCCGGGTCGACGCCGGCGATGGTCAGCGCG
TTGGGGATCTGGCCCTTTTTGGCGGCCGGCTGGCGGCTGCTCATTTGGCG
GCGCCGGGGGCGGCGGTGATCAGGCCTTCGGTGGGCGAGCTGGGCGCGCC
GCTGTAGAGCTTTTTCGGCATGCGGCCGGCCAGGAAGGCCTCGCGGCCGG
ACTCGACGCCCTTTTTCATGGCGCTGGCCATCAGCACCGGGTCGCGCGCG
GCGGCGATGGCGGTGTTCATCAGCACGGCGTCGCAGCCCAGTTCCATGGC
GATGGCGGCGTCCGAGGCGGTGCCCACGCCGGCGTCCACCACCACCGGCA
CGCGCGCCTGGTCGATGATCAGGCGTAGATTCCAGGGGTTCAAGATGCCC
ATGCCGGAGCCGATCAGCGAGGCCAGCGGCATCACGGCCACGGCGCCCAT
GTCTTCAAGCATGCGGCACTGGATGGGATCGTCGGTGCAATAGACCCATG
ACCTGAAAGCCCTCATCCCCACACGTCTAGGTGGCCTTGAAGGTTTCCGG
GCATGTTTGGGGAACAGCGTGTGGCGGATCGGCCAGCCCTTTCCACTTGG
CAAATGCGTGGCCCGTCCAGCAACTCCCGCCGCCCAGGCGCACCGTGTTC
ACCGGTGTCCTTCGGCCTAATATATTTCCGTCTGCGGTTGGGACAACATC
GATATACTTGGACACTCAAGACATTAATCCCGAGCATGGTAGGTCCCCCC
CCCGGGTTTCCTGTCCCATAAGTTTGGTAGAGGAAGAAAAGGCTTCCCTT
ATAATGATCCTCCCATACCCCACTGTGTCTTCCATACTCTGGGTGACGGG
GTATATTAATATTAAGAATCTACTAGATGATATTATCGCTTCACTCCCAG
AATAACTATCTGAAGCTGTGTCGATAATAATATATACATGCGTACAGTAA
AGTATTTATTAGAAAAAAAGAGTGATATAGTTATATGACACACTGTGACA
TCAGCATGTGTAGGTATGTCTTATAATTTTACATCATGTTGGTATCATTA
GCTT
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