EY679573

Overview
NameEY679573
Unique NameEY679573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1054
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_MARMM (Thiazole biosynthesis protein thiG OS=Maricaulis maris (strain MCS10) GN=thiG PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 3.544e-42
Identity = 85/130 (65.38%), Postives = 104/130 (80.00%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F   VYC+DDP+  R LE++G  A+MPL + IGSG+GI NP N+RLII+Q +VPV+VDAGVGTASDA +AMELGCD VLMNTAIA A+DP+ MA AM+  V +GRE++LAGRMPKK Y+  PSSP  GLI
Sbjct:  139 FDVMVYCSDDPVYARKLEEIGCCAIMPLGAPIGSGLGIQNPVNIRLIIEQTKVPVIVDAGVGTASDATVAMELGCDGVLMNTAIAEAKDPIRMARAMRHAVIAGRESYLAGRMPKKRYAD-PSSPLSGLI 267          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_PSEF5 (Thiazole biosynthesis protein thiG OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=thiG PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 4.629e-42
Identity = 90/151 (59.60%), Postives = 116/151 (76.82%), Query Frame = -2
Query:  118 TLFPKHARKPSRPPRRVGMRAFRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 570
            TLFP +  +  +    +    F   VY +DDPI  R L +MG +AVMPLA LIG+G+GI NP+NL++I+++A+VPV+VDAGVGTASDA IAMELGC+AVLMN+AIA A+ PV+MA AMK  + +GR A+LAGRMPKKLY+ A SSP +GLI
Sbjct:  115 TLFP-NVLETLKAAEVLVKEGFDVMVYTSDDPIIARQLAEMGCIAVMPLAGLIGTGLGICNPYNLQIILEEAKVPVLVDAGVGTASDATIAMELGCEAVLMNSAIAHAQQPVMMAEAMKHAIVAGRLAYLAGRMPKKLYASA-SSPLDGLI 263          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_PHEZH (Thiazole biosynthesis protein thiG OS=Phenylobacterium zucineum (strain HLK1) GN=thiG PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 4.629e-42
Identity = 87/130 (66.92%), Postives = 105/130 (80.77%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F+  VYC+DDP+  + LE+ GA A+MP A+ IGSG GI N  NL LII+QA+VPV+VDAGVGTASDA IAMELGCDAVLMNTAIA A+DP+ MA AM+  V +GREA+LAGRMPK++Y+  PSSP  GLI
Sbjct:  134 FQVMVYCSDDPVYAKKLEEAGAAAIMPAAAPIGSGRGIQNALNLALIIEQAKVPVLVDAGVGTASDATIAMELGCDAVLMNTAIAEAKDPIRMARAMRHAVIAGREAYLAGRMPKRMYA-EPSSPLSGLI 262          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_NITOC (Thiazole biosynthesis protein thiG OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=thiG PE=3 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 7.895e-42
Identity = 85/128 (66.41%), Postives = 106/128 (82.81%), Query Frame = -2
Query:  124 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEG 507
            F+  VY  DDPI  + LE+MG VAVMPLA+ IGSG+GI NP+N+  I+  A VP++VDAGVGTASDAA+AMELGCD VLMNTAIA A++P+LMASAMKK VE+GR+A+LAGR+P++ Y+ A SSP EG
Sbjct:  133 FQVMVYTNDDPIAAKRLEEMGCVAVMPLAAPIGSGLGIRNPYNILEIVQNATVPILVDAGVGTASDAAVAMELGCDGVLMNTAIAGAQNPILMASAMKKAVEAGRDAYLAGRIPRRRYASA-SSPLEG 259          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_CAUSK (Thiazole biosynthesis protein thiG OS=Caulobacter sp. (strain K31) GN=thiG PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.895e-42
Identity = 91/151 (60.26%), Postives = 113/151 (74.83%), Query Frame = -2
Query:  118 TLFPKHARKPSRPPRRVGMRAFRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 570
            TL+P    +  R  + +    F+  VYC+DDP+  R LE+ GAVA+MPL + IGSG+GI N  NLR+I++ A VPV+VDAGVGTASDAAI MELGCDA+LMNTAIA A+DP+ MA AMK  V +GREA+LAGRM K+LY+  PSSP  GLI
Sbjct:  120 TLYPD-MEETLRSLKLLVSEGFQVMVYCSDDPVYARKLEEAGAVAIMPLGAPIGSGLGIQNRVNLRIIVENAGVPVLVDAGVGTASDAAIGMELGCDAILMNTAIAEAKDPIRMARAMKHAVIAGREAYLAGRMQKRLYAD-PSSPLGGLI 268          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_PSEPF (Thiazole biosynthesis protein thiG OS=Pseudomonas fluorescens (strain Pf0-1) GN=thiG PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 1.031e-41
Identity = 84/130 (64.62%), Postives = 108/130 (83.08%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F   VY +DDPI  R L ++G +AVMPLA LIGSG+GI NP+NL++I+++A++PV+VDAGVGTASDA I+MELGCDAVLMN+AIA A+ P++MA AMK  + +GR A+LAGRMPKKLY+ A SSP +GLI
Sbjct:  135 FDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLQIILEEAKIPVLVDAGVGTASDATISMELGCDAVLMNSAIAHAQQPIMMAEAMKHAIVAGRLAYLAGRMPKKLYASA-SSPLDGLI 263          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_PSEFS (Thiazole biosynthesis protein thiG OS=Pseudomonas fluorescens (strain SBW25) GN=thiG PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 1.031e-41
Identity = 88/151 (58.28%), Postives = 115/151 (76.16%), Query Frame = -2
Query:  118 TLFPKHARKPSRPPRRVGMRAFRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 570
            TLFP +  +  +    +    F   VY +DDPI  R L ++G +AVMPLA LIGSG+GI NP+NL++I+++A++PV+VDAGVGTASDA IAMELGCDAVLMN+AIA A+ P++MA AM   + +GR A+LAGRMPKKLY+ A SSP +GLI
Sbjct:  115 TLFP-NVIETLKAAETLVKEGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLQIILEEAKIPVLVDAGVGTASDATIAMELGCDAVLMNSAIAHAQQPIMMAEAMNHAIVAGRLAYLAGRMPKKLYASA-SSPLDGLI 263          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_MYXXD (Thiazole biosynthesis protein thiG OS=Myxococcus xanthus (strain DK 1622) GN=thiG PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.347e-41
Identity = 91/151 (60.26%), Postives = 113/151 (74.83%), Query Frame = -2
Query:  118 TLFPKHARKPSRPPRRVGMRAFRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 570
            TL+P    +  +  R +    F    Y +DDPI  R LED G  AVMPLA+ IGSG+GI NP N+RLI++  +VPV+VDAGVGTASDAAIAMELG +AVLMNTAIA A+DPV MA AMKK VE+GR+A+LAGR+P+K Y G+ SSP +GL+
Sbjct:  111 TLYPD-VEETVKAARILVKEGFTVLPYTSDDPITARKLEDAGCAAVMPLAAPIGSGLGIRNPHNIRLILETVKVPVIVDAGVGTASDAAIAMELGVEAVLMNTAIAGAQDPVRMAVAMKKAVEAGRDAYLAGRIPRKAY-GSASSPIDGLV 259          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_PSEPK (Thiazole biosynthesis protein thiG OS=Pseudomonas putida (strain KT2440) GN=thiG PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 3.000e-41
Identity = 84/130 (64.62%), Postives = 108/130 (83.08%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F   VY +DDPI  R L ++G +AVMPLA LIG+G+GI NP+NL++I+++++VPV+VDAGVGTASDA IAME+GC+AVLMN+AIA A+ PVLMA AMK  + +GR A+LAGRMPKKLY+ A SSP +GLI
Sbjct:  141 FDVMVYTSDDPIIARQLAEVGCIAVMPLAGLIGTGLGICNPYNLQIILEESKVPVLVDAGVGTASDATIAMEMGCEAVLMNSAIAHAQQPVLMAEAMKHAIVAGRMAYLAGRMPKKLYASA-SSPLDGLI 269          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_PSEPG (Thiazole biosynthesis protein thiG OS=Pseudomonas putida (strain GB-1) GN=thiG PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 3.000e-41
Identity = 84/130 (64.62%), Postives = 108/130 (83.08%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F   VY +DDPI  R L ++G +AVMPLA LIG+G+GI NP+NL++I+++++VPV+VDAGVGTASDA IAME+GC+AVLMN+AIA A+ PVLMA AMK  + +GR A+LAGRMPKKLY+ A SSP +GLI
Sbjct:  141 FDVMVYTSDDPIIARQLAEVGCIAVMPLAGLIGTGLGICNPYNLQIILEESKVPVLVDAGVGTASDATIAMEMGCEAVLMNSAIAHAQQPVLMAEAMKHAIVAGRMAYLAGRMPKKLYASA-SSPLDGLI 269          
The following BLAST results are available for this feature:
BLAST of EY679573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 398
Match NameE-valueIdentityDescription
THIG_MARMM3.544e-4265.38Thiazole biosynthesis protein thiG OS=Maricaulis m... [more]
THIG_PSEF54.629e-4259.60Thiazole biosynthesis protein thiG OS=Pseudomonas ... [more]
THIG_PHEZH4.629e-4266.92Thiazole biosynthesis protein thiG OS=Phenylobacte... [more]
THIG_NITOC7.895e-4266.41Thiazole biosynthesis protein thiG OS=Nitrosococcu... [more]
THIG_CAUSK7.895e-4260.26Thiazole biosynthesis protein thiG OS=Caulobacter ... [more]
THIG_PSEPF1.031e-4164.62Thiazole biosynthesis protein thiG OS=Pseudomonas ... [more]
THIG_PSEFS1.031e-4158.28Thiazole biosynthesis protein thiG OS=Pseudomonas ... [more]
THIG_MYXXD1.347e-4160.26Thiazole biosynthesis protein thiG OS=Myxococcus x... [more]
THIG_PSEPK3.000e-4164.62Thiazole biosynthesis protein thiG OS=Pseudomonas ... [more]
THIG_PSEPG3.000e-4164.62Thiazole biosynthesis protein thiG OS=Pseudomonas ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-052-F12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679573 ID=EY679573; Name=EY679573; organism=Citrus sinensis; type=EST; length=1054bp
CCGGTAACGGGTCGGGAATTCCCGGGTCGACGCCGGCGATGGTCAGCGCG
TTGGGGATCTGGCCCTTTTTGGCGGCCGGCTGGCGGCTGCTCATTTGGCG
GCGCCGGGGGCGGCGGTGATCAGGCCTTCGGTGGGCGAGCTGGGCGCGCC
GCTGTAGAGCTTTTTCGGCATGCGGCCGGCCAGGAAGGCCTCGCGGCCGG
ACTCGACGCCCTTTTTCATGGCGCTGGCCATCAGCACCGGGTCGCGCGCG
GCGGCGATGGCGGTGTTCATCAGCACGGCGTCGCAGCCCAGTTCCATGGC
GATGGCGGCGTCCGAGGCGGTGCCCACGCCGGCGTCCACCACCACCGGCA
CGCGCGCCTGGTCGATGATCAGGCGTAGATTCCAGGGGTTCAAGATGCCC
ATGCCGGAGCCGATCAGCGAGGCCAGCGGCATCACGGCCACGGCGCCCAT
GTCTTCAAGCATGCGGCACTGGATGGGATCGTCGGTGCAATAGACCCATG
ACCTGAAAGCCCTCATCCCCACACGTCTAGGTGGCCTTGAAGGTTTCCGG
GCATGTTTGGGGAACAGCGTGTGGCGGATCGGCCAGCCCTTTCCACTTGG
CAAATGCGTGGCCCGTCCAGCAACTCCCGCCGCCCAGGCGCACCGTGTTC
ACCGGTGTCCTTCGGCCTAATATATTTCCGTCTGCGGTTGGGACAACATC
GATATACTTGGACACTCAAGACATTAATCCCGAGCATGGTAGGTCCCCCC
CCCGGGTTTCCTGTCCCATAAGTTTGGTAGAGGAAGAAAAGGCTTCCCTT
ATAATGATCCTCCCATACCCCACTGTGTCTTCCATACTCTGGGTGACGGG
GTATATTAATATTAAGAATCTACTAGATGATATTATCGCTTCACTCCCAG
AATAACTATCTGAAGCTGTGTCGATAATAATATATACATGCGTACAGTAA
AGTATTTATTAGAAAAAAAGAGTGATATAGTTATATGACACACTGTGACA
TCAGCATGTGTAGGTATGTCTTATAATTTTACATCATGTTGGTATCATTA
GCTT
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