EY679573

Overview
NameEY679573
Unique NameEY679573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1054
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_ANADF (Thiazole biosynthesis protein thiG OS=Anaeromyxobacter sp. (strain Fw109-5) GN=thiG PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 7.390e-40
Identity = 84/125 (67.20%), Postives = 101/125 (80.80%), Query Frame = -2
Query:  118 YCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 492
            Y  DDP+  + LED G  AVMPL + IGSG+GI NP+NLR+I++  +VPV+VDAGVGTASDAA+AMELG  AVLMNTAIA ARDPVLMA AM+ GVE GR+A+LAGR+P KL++ A SSP  GLI
Sbjct:  132 YTNDDPVTAKKLEDAGCAAVMPLGAPIGSGLGIRNPYNLRIIMETVKVPVLVDAGVGTASDAAVAMELGAVAVLMNTAIAEARDPVLMAEAMRAGVEGGRKAYLAGRIPTKLHASA-SSPMTGLI 255          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_ALHEH (Thiazole biosynthesis protein thiG OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=thiG PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 7.390e-40
Identity = 84/128 (65.62%), Postives = 103/128 (80.47%), Query Frame = -2
Query:  124 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEG 507
            F   VY +DDPI  + LE++G VAVMPL + IGSG+GI N WN+  I++ A VPV+VDAGVGTASDA+ AMELGCD VLMNTAIA A+ PVLMASAM+K VE+GREA+LAGR+P+K ++ A SSP EG
Sbjct:  133 FDVMVYTSDDPITAKRLEEVGCVAVMPLGAPIGSGLGIQNHWNILTIVENASVPVLVDAGVGTASDASEAMELGCDGVLMNTAIAGAQRPVLMASAMRKAVEAGREAYLAGRIPRKRFASA-SSPLEG 259          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_ANASK (Thiazole biosynthesis protein thiG OS=Anaeromyxobacter sp. (strain K) GN=thiG PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.261e-39
Identity = 89/153 (58.17%), Postives = 110/153 (71.90%), Query Frame = -2
Query:  118 RHTLFPKHARKPSRPPRRVGMRAFRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 576
            R TLFP       +  + +    F    Y  DDP+  + LED G  AVMPL + IGSG+G+ NP+NLR+I++  +VPV+VDAGVGTASDAA+AMELG  AVLMNTAIA A+DPVLMA AM+ GVE GR+AFLAGR+P KL++ A SSP  GLI
Sbjct:  105 RRTLFPD-VEGLIQAAKVLVKEGFTVLPYTNDDPVTAKKLEDAGCAAVMPLGAPIGSGLGLRNPYNLRIIMETVQVPVLVDAGVGTASDAALAMELGAVAVLMNTAIAEAKDPVLMAEAMRAGVEGGRKAFLAGRIPMKLHAAA-SSPMSGLI 255          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_ANADE (Thiazole biosynthesis protein thiG OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=thiG PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.261e-39
Identity = 89/153 (58.17%), Postives = 110/153 (71.90%), Query Frame = -2
Query:  118 RHTLFPKHARKPSRPPRRVGMRAFRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 576
            R TLFP       +  + +    F    Y  DDP+  + LED G  AVMPL + IGSG+G+ NP+NLR+I++  +VPV+VDAGVGTASDAA+AMELG  AVLMNTAIA A+DPVLMA AM+ GVE GR+AFLAGR+P KL++ A SSP  GLI
Sbjct:  105 RRTLFPD-VEGLIQAAKVLVKEGFTVLPYTNDDPVTAKKLEDAGCAAVMPLGAPIGSGLGLRNPYNLRIIMETVQVPVLVDAGVGTASDAALAMELGAVAVLMNTAIAEAKDPVLMAEAMRAGVEGGRKAFLAGRIPMKLHAAA-SSPMSGLI 255          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_ANAD2 (Thiazole biosynthesis protein thiG OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=thiG PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.261e-39
Identity = 89/153 (58.17%), Postives = 110/153 (71.90%), Query Frame = -2
Query:  118 RHTLFPKHARKPSRPPRRVGMRAFRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 576
            R TLFP       +  + +    F    Y  DDP+  + LED G  AVMPL + IGSG+G+ NP+NLR+I++  +VPV+VDAGVGTASDAA+AMELG  AVLMNTAIA A+DPVLMA AM+ GVE GR+AFLAGR+P KL++ A SSP  GLI
Sbjct:  105 RRTLFPD-VEGLIQAAKVLVKEGFTVLPYTNDDPVTAKKLEDAGCAAVMPLGAPIGSGLGLRNPYNLRIIMETVQVPVLVDAGVGTASDAALAMELGAVAVLMNTAIAEAKDPVLMAEAMRAGVEGGRKAFLAGRIPMKLHAAA-SSPMSGLI 255          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_GEOSL (Thiazole biosynthesis protein thiG OS=Geobacter sulfurreducens GN=thiG PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.808e-39
Identity = 87/151 (57.62%), Postives = 109/151 (72.19%), Query Frame = -2
Query:  118 TLFPKHARKPSRPPRRVGMRAFRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 570
            TLFP +  +  +  + +    F    Y +DDPI C+ LED+G  AVMPL + IGSG+GI NP+N+ +I +  +VPV+VDAGVGTASDAAIAMELG D VLMNT IA ARDP+ MA AM   V +GR A+LAGR+PKKLY+ A SSP EG+I
Sbjct:  111 TLFPDN-EELLKAAKILVKEGFTVLPYTSDDPIVCKKLEDIGCAAVMPLGAPIGSGLGIRNPYNILIIKETVKVPVIVDAGVGTASDAAIAMELGIDGVLMNTGIAGARDPIAMAEAMNMAVRAGRLAYLAGRIPKKLYATA-SSPIEGMI 259          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_PSYCK (Thiazole biosynthesis protein thiG OS=Psychrobacter cryohalolentis (strain K5) GN=thiG PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 6.254e-39
Identity = 84/128 (65.62%), Postives = 100/128 (78.12%), Query Frame = -2
Query:  124 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEG 507
            F   VY +DDPI  + LE MG VA+MPL SLIGSG+G+LN   L LII+ A+VPV+VDAGVGTASDAAIAMELGCD VLMN+AIA A++PV+MA AMK  V +GR+AFLAGRMP +  + A SSP  G
Sbjct:  144 FEVMVYTSDDPIVAQELESMGCVAIMPLGSLIGSGLGLLNRHTLSLIIENAKVPVLVDAGVGTASDAAIAMELGCDGVLMNSAIANAQNPVMMAQAMKHAVWAGRQAFLAGRMPMRKMATA-SSPQTG 270          

HSP 2 Score: 24.6386 bits (52), Expect = 6.254e-39
Identity = 15/39 (38.46%), Postives = 18/39 (46.15%), Query Frame = -1
Query:  497 GHAFAKWKGLADPPHAVPQTCPETFKAT*TCGDEGFQVM 613
            GH   K + L D     P    ET KA     D+GF+VM
Sbjct:  110 GHNLVKLEVLGDEKTLYPNVM-ETLKAAKVLIDDGFEVM 147          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_PSYA2 (Thiazole biosynthesis protein thiG OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=thiG PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.347e-38
Identity = 82/128 (64.06%), Postives = 99/128 (77.34%), Query Frame = -2
Query:  124 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEG 507
            F   VY +DDPI  + LE MG VA+MPL SLIGSG+G++N   L LII+  +VPV+VDAGVGTASDAAIAMELGCD VLMN+AIA A++PV+MA AMK  V +GR+AFLAGRMP +  + A SSP  G
Sbjct:  144 FEVMVYTSDDPIVAQELESMGCVAIMPLGSLIGSGLGLINRHTLSLIIENTKVPVLVDAGVGTASDAAIAMELGCDGVLMNSAIANAKNPVMMAQAMKHAVWAGRQAFLAGRMPMRKMATA-SSPQTG 270          

HSP 2 Score: 24.6386 bits (52), Expect = 2.347e-38
Identity = 15/39 (38.46%), Postives = 18/39 (46.15%), Query Frame = -1
Query:  497 GHAFAKWKGLADPPHAVPQTCPETFKAT*TCGDEGFQVM 613
            GH   K + L D     P    ET KA     D+GF+VM
Sbjct:  110 GHNLVKLEVLGDEKTLYPNVM-ETLKAAKVLIDDGFEVM 147          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_THEYD (Thiazole biosynthesis protein thiG OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=thiG PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 3.105e-38
Identity = 77/126 (61.11%), Postives = 100/126 (79.37%), Query Frame = -2
Query:  115 YCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLIT 492
            Y  DDPI  + L D GA AVMPL + IGSG+GI NP+N+++I++   +PV+VDAGVGTASD +IAMELGCDAVL+NTAIA A+DP++MA A+K    +GR A+ AGR+PKKLY+ A SSP EG++T
Sbjct:  133 YTNDDPITAKRLVDAGAAAVMPLGAPIGSGLGIRNPYNIKIILETVNIPVIVDAGVGTASDVSIAMELGCDAVLVNTAIAGAKDPIMMAEALKHACIAGRLAYRAGRIPKKLYASA-SSPIEGMLT 257          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_GEOMG (Thiazole biosynthesis protein thiG OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=thiG PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 9.033e-38
Identity = 79/125 (63.20%), Postives = 99/125 (79.20%), Query Frame = -2
Query:  118 YCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 492
            Y +DDPI C+ LED+G  AVMPL + IGSG+GI NP+ +R+I++  +VPV+VDAGVGTASDAAIAMELG D VLMNT IA A++P+ MA AM   V +GR A+ AGR+PKKLY+ A SSP EG+I
Sbjct:  136 YTSDDPIICKKLEDIGCAAVMPLGAPIGSGLGIRNPYTIRIIMETVKVPVIVDAGVGTASDAAIAMELGVDGVLMNTGIAGAQNPIAMAEAMNLAVRAGRLAYRAGRIPKKLYATA-SSPIEGMI 259          
The following BLAST results are available for this feature:
BLAST of EY679573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 398
Match NameE-valueIdentityDescription
THIG_ANADF7.390e-4067.20Thiazole biosynthesis protein thiG OS=Anaeromyxoba... [more]
THIG_ALHEH7.390e-4065.63Thiazole biosynthesis protein thiG OS=Alkalilimnic... [more]
THIG_ANASK1.261e-3958.17Thiazole biosynthesis protein thiG OS=Anaeromyxoba... [more]
THIG_ANADE1.261e-3958.17Thiazole biosynthesis protein thiG OS=Anaeromyxoba... [more]
THIG_ANAD21.261e-3958.17Thiazole biosynthesis protein thiG OS=Anaeromyxoba... [more]
THIG_GEOSL2.808e-3957.62Thiazole biosynthesis protein thiG OS=Geobacter su... [more]
THIG_PSYCK6.254e-3965.63Thiazole biosynthesis protein thiG OS=Psychrobacte... [more]
THIG_PSYA22.347e-3864.06Thiazole biosynthesis protein thiG OS=Psychrobacte... [more]
THIG_THEYD3.105e-3861.11Thiazole biosynthesis protein thiG OS=Thermodesulf... [more]
THIG_GEOMG9.033e-3863.20Thiazole biosynthesis protein thiG OS=Geobacter me... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-052-F12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679573 ID=EY679573; Name=EY679573; organism=Citrus sinensis; type=EST; length=1054bp
CCGGTAACGGGTCGGGAATTCCCGGGTCGACGCCGGCGATGGTCAGCGCG
TTGGGGATCTGGCCCTTTTTGGCGGCCGGCTGGCGGCTGCTCATTTGGCG
GCGCCGGGGGCGGCGGTGATCAGGCCTTCGGTGGGCGAGCTGGGCGCGCC
GCTGTAGAGCTTTTTCGGCATGCGGCCGGCCAGGAAGGCCTCGCGGCCGG
ACTCGACGCCCTTTTTCATGGCGCTGGCCATCAGCACCGGGTCGCGCGCG
GCGGCGATGGCGGTGTTCATCAGCACGGCGTCGCAGCCCAGTTCCATGGC
GATGGCGGCGTCCGAGGCGGTGCCCACGCCGGCGTCCACCACCACCGGCA
CGCGCGCCTGGTCGATGATCAGGCGTAGATTCCAGGGGTTCAAGATGCCC
ATGCCGGAGCCGATCAGCGAGGCCAGCGGCATCACGGCCACGGCGCCCAT
GTCTTCAAGCATGCGGCACTGGATGGGATCGTCGGTGCAATAGACCCATG
ACCTGAAAGCCCTCATCCCCACACGTCTAGGTGGCCTTGAAGGTTTCCGG
GCATGTTTGGGGAACAGCGTGTGGCGGATCGGCCAGCCCTTTCCACTTGG
CAAATGCGTGGCCCGTCCAGCAACTCCCGCCGCCCAGGCGCACCGTGTTC
ACCGGTGTCCTTCGGCCTAATATATTTCCGTCTGCGGTTGGGACAACATC
GATATACTTGGACACTCAAGACATTAATCCCGAGCATGGTAGGTCCCCCC
CCCGGGTTTCCTGTCCCATAAGTTTGGTAGAGGAAGAAAAGGCTTCCCTT
ATAATGATCCTCCCATACCCCACTGTGTCTTCCATACTCTGGGTGACGGG
GTATATTAATATTAAGAATCTACTAGATGATATTATCGCTTCACTCCCAG
AATAACTATCTGAAGCTGTGTCGATAATAATATATACATGCGTACAGTAA
AGTATTTATTAGAAAAAAAGAGTGATATAGTTATATGACACACTGTGACA
TCAGCATGTGTAGGTATGTCTTATAATTTTACATCATGTTGGTATCATTA
GCTT
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