EY679514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679514 vs. ExPASy Swiss-Prot
Match: TBB6_GOSHI (Tubulin beta-6 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 2.217e-77 Identity = 145/203 (71.43%), Postives = 163/203 (80.30%), Query Frame = 1 Query: 73 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGD--TDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCPSLVGGTGSGMGNFVEYQR*NRKTGIK*WLLSSIFPFP*GS*NWC*T*QTTLLDNRLFENEDKRM 675 MREILH+QGGQCGNQIGSKFWEV+C EHG+DPTGKY GD +D+QLERI+VYYNEAS GRYVPRAVLMDLEPGTMDS+RSGP GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVC SL GGTGSGMG + + + + + S+FP P S TL ++L EN D+ M Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGKYNGDGSSDIQLERIDVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPIGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLL-ISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM 202
BLAST of EY679514 vs. ExPASy Swiss-Prot
Match: TBB9_ARATH (Tubulin beta-9 chain OS=Arabidopsis thaliana GN=TUBB9 PE=2 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 2.896e-77 Identity = 145/201 (72.14%), Postives = 162/201 (80.60%), Query Frame = 1 Query: 73 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCPSLVGGTGSGMGNFVEYQR*NRKTGIK*WLLSSIFPFP*GS*NWC*T*QTTLLDNRLFENEDKRM 675 MREILHIQGGQCGNQIG+KFWEV+C EHGID TG+ GDTDLQLERINVY+NEAS G+YVPRAVLMDLEPGTMDS+RSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVC SL GGTGSGMG + + + + + S+FP P S TL ++L EN D+ M Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLL-ISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM 200
BLAST of EY679514 vs. ExPASy Swiss-Prot
Match: TBB2_DAUCA (Tubulin beta-2 chain OS=Daucus carota GN=TUBB2 PE=2 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 6.451e-77 Identity = 144/201 (71.64%), Postives = 162/201 (80.60%), Query Frame = 1 Query: 73 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCPSLVGGTGSGMGNFVEYQR*NRKTGIK*WLLSSIFPFP*GS*NWC*T*QTTLLDNRLFENEDKRM 675 MREILHIQGGQCGNQIGSKFWEVVC EHGIDPTG+ ++DLQL+RINVYYNEAS GRYVPRAVLMDLEPGTMDSV++GP+GQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC+CLQGFQVC SL GGTGSGMG + + + + L S+FP P S TL ++L EN D+ M Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGQVLSESDLQLDRINVYYNEASGGRYVPRAVLMDLEPGTMDSVKTGPHGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCECLQGFQVCHSLGGGTGSGMGTLL-ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSGHQLVENADECM 200
BLAST of EY679514 vs. ExPASy Swiss-Prot
Match: TBB1_ANEPH (Tubulin beta-1 chain OS=Anemia phyllitidis GN=TUBB1 PE=2 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 6.451e-77 Identity = 133/151 (88.08%), Postives = 141/151 (93.38%), Query Frame = 1 Query: 73 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCPSLVGGTGSGMGNFV 525 MREILH+QGGQCGNQIG+KFWEVVC EHGIDPTG Y+GD++ QLER+NVYYNEASCGRYVPRAVLMDLEPGTMDSVRSG YGQ+FRPDNFVFGQSGAGNNWAKG YTEGAELIDSVL VVRKEAENCDCLQGFQVC SL GGTGSGMG + Sbjct: 1 MREILHVQGGQCGNQIGAKFWEVVCTEHGIDPTGTYRGDSETQLERVNVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGHYGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELIDSVLAVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLL 151
BLAST of EY679514 vs. ExPASy Swiss-Prot
Match: TBB_CHLRE (Tubulin beta-1/beta-2 chain OS=Chlamydomonas reinhardtii GN=TUBB1 PE=3 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.877e-76 Identity = 144/201 (71.64%), Postives = 161/201 (80.10%), Query Frame = 1 Query: 73 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCPSLVGGTGSGMGNFVEYQR*NRKTGIK*WLLSSIFPFP*GS*NWC*T*QTTLLDNRLFENEDKRM 675 MREI+HIQGGQCGNQIG+KFWEVV EHGIDPTG Y GD+DLQLERINVY+NEA+ GRYVPRA+LMDLEPGTMDSVRSGPYGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE+CDCLQGFQVC SL GGTGSGMG + + + + L S+ P P S TL ++L EN D+ M Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLL-ISKIREEYPDRMMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENADECM 200
BLAST of EY679514 vs. ExPASy Swiss-Prot
Match: TBB1_VOLCA (Tubulin beta chain OS=Volvox carteri GN=TUBB1 PE=3 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.877e-76 Identity = 144/201 (71.64%), Postives = 161/201 (80.10%), Query Frame = 1 Query: 73 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCPSLVGGTGSGMGNFVEYQR*NRKTGIK*WLLSSIFPFP*GS*NWC*T*QTTLLDNRLFENEDKRM 675 MREI+HIQGGQCGNQIG+KFWEVV EHGIDPTG Y GD+DLQLERINVY+NEA+ GRYVPRA+LMDLEPGTMDSVRSGPYGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE+CDCLQGFQVC SL GGTGSGMG + + + + L S+ P P S TL ++L EN D+ M Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLL-ISKIREEYPDRMMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENADECM 200
BLAST of EY679514 vs. ExPASy Swiss-Prot
Match: TBB_CICAR (Tubulin beta chain OS=Cicer arietinum GN=TUBB PE=2 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 2.451e-76 Identity = 145/203 (71.43%), Postives = 162/203 (79.80%), Query Frame = 1 Query: 73 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKY--QGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCPSLVGGTGSGMGNFVEYQR*NRKTGIK*WLLSSIFPFP*GS*NWC*T*QTTLLDNRLFENEDKRM 675 MREILH+QGGQCGNQIGSKFWEV+C EHGID TGKY +G +D QLERINVYYNEAS GRYVPRAVLMDLEPGTM+S+RSGP+G++FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVC SL GGTGSGMG + + + + L S+FP P S TL ++L EN D+ M Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGIDQTGKYISEGGSDTQLERINVYYNEASGGRYVPRAVLMDLEPGTMESIRSGPFGKIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLL-ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM 202
BLAST of EY679514 vs. ExPASy Swiss-Prot
Match: TBB_CHLIN (Tubulin beta chain OS=Chlamydomonas incerta GN=TUBB PE=3 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 2.451e-76 Identity = 143/201 (71.14%), Postives = 161/201 (80.10%), Query Frame = 1 Query: 73 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCPSLVGGTGSGMGNFVEYQR*NRKTGIK*WLLSSIFPFP*GS*NWC*T*QTTLLDNRLFENEDKRM 675 MREI+HIQGGQCGNQIG+KFWEVV EHG+DPTG Y GD+DLQLERINVY+NEA+ GRYVPRA+LMDLEPGTMDSVRSGPYGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE+CDCLQGFQVC SL GGTGSGMG + + + + L S+ P P S TL ++L EN D+ M Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGVDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLL-ISKIREEYPDRMMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENADECM 200
BLAST of EY679514 vs. ExPASy Swiss-Prot
Match: TBB3_PEA (Tubulin beta-3 chain (Fragment) OS=Pisum sativum GN=TUBB3 PE=2 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 1.589e-75 Identity = 140/192 (72.92%), Postives = 156/192 (81.25%), Query Frame = 1 Query: 100 GQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCPSLVGGTGSGMGNFVEYQR*NRKTGIK*WLLSSIFPFP*GS*NWC*T*QTTLLDNRLFENEDKRM 675 GQCGNQIGSKFWEVVC EHGIDPTG+Y G++DLQLER+NVYYNEASCGR+VPRA+LMDLEPGTMDSVR+GPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVC SL GGTGSGMG + + + + L S+FP P S TL ++L EN D+ M Sbjct: 1 GQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRFVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLL-ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM 191
BLAST of EY679514 vs. ExPASy Swiss-Prot
Match: TBB_NAEGR (Tubulin beta chain OS=Naegleria gruberi PE=2 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 4.623e-75 Identity = 139/201 (69.15%), Postives = 160/201 (79.60%), Query Frame = 1 Query: 73 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCPSLVGGTGSGMGNFVEYQR*NRKTGIK*WLLSSIFPFP*GS*NWC*T*QTTLLDNRLFENEDKRM 675 MREI+HIQ GQCGNQIG+KFWEV+ EHG+DPTG Y GD+DLQLERINVYYNEA+ GRYVPRA+LMDLEPGTMDSVR+GPYGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE+CDCLQGFQ+ SL GGTGSGMG + + + + + S+FP P S TL ++L EN D+ M Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGVDPTGAYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQIAHSLGGGTGSGMGTLL-ISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVM 200 The following BLAST results are available for this feature:
BLAST of EY679514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 416
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679514 ID=EY679514; Name=EY679514; organism=Citrus sinensis; type=EST; length=945bpback to top |