EY679500

Overview
NameEY679500
Unique NameEY679500
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1001
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RAB25_HUMAN (Ras-related protein Rab-25 OS=Homo sapiens GN=RAB25 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 6.439e-38
Identity = 75/136 (55.15%), Postives = 101/136 (74.26%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAES 467
            ++FK+V+IG+S VGK+NLLSR+ RNEF+  S+ TIGVEF T+++ +    VKAQIWDTAG ER+RA+TSAYYRGAVGAL+V+D+T+  T+  + RWL EL  H++ T+  MLVG   DL   R   TEE +  AE+
Sbjct:   11 FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAEN 146
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RAB25_RABIT (Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 8.410e-38
Identity = 75/136 (55.15%), Postives = 101/136 (74.26%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAES 467
            ++FK+V+IG+S VGK+NLLSR+ RNEF+  S+ TIGVEF T+++ +    VKAQIWDTAG ER+RA+TSAYYRGAVGAL+V+D+T+  T+  + RWL EL  H++ T+  MLVG   DL   R   TEE +  AE+
Sbjct:   11 FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAEN 146
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RAB25_BOVIN (Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.098e-37
Identity = 74/136 (54.41%), Postives = 101/136 (74.26%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAES 467
            ++FK+V+IG+S VGK+NLLSR+ RNEF+  S+ TIGVEF T+++ +    +KAQIWDTAG ER+RA+TSAYYRGAVGAL+V+D+T+  T+  + RWL EL  H++ T+  MLVG   DL   R   TEE +  AE+
Sbjct:   11 FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEARMFAEN 146
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RAB25_MOUSE (Ras-related protein Rab-25 OS=Mus musculus GN=Rab25 PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 2.447e-37
Identity = 75/136 (55.15%), Postives = 100/136 (73.53%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAES 467
            ++FK+V+IG+S VGK+NLLSR+ RNEF+  S+ TIGVEF T+++ +    VKAQIWDTAG ER+RA+TSAYYRGAVGAL+V+D+T+  T+  + RWL EL  H++ T+  MLVG   DL   R   TEE    AE+
Sbjct:   11 FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAEN 146
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 7.872e-36
Identity = 72/134 (53.73%), Postives = 96/134 (71.64%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLA 461
            YLFK +IIGD+ VGKS LL ++    F P    TIGVEF  + + IDGK++K QIWDTAGQE FR++T +YYRGA GAL+VYDITRR TF+ ++ WL++ + HS + +  ML+G   DLES R+   EEG++ A
Sbjct:    5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFA 138
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 7.872e-36
Identity = 72/134 (53.73%), Postives = 96/134 (71.64%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLA 461
            YLFK +IIGD+ VGKS LL ++    F P    TIGVEF  + + IDGK++K QIWDTAGQE FR++T +YYRGA GAL+VYDITRR TF+ ++ WL++ + HS + +  ML+G   DLES R+   EEG++ A
Sbjct:    5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFA 138
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.028e-35
Identity = 71/135 (52.59%), Postives = 96/135 (71.11%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAE 464
            YLFK +IIGD+ VGKS LL ++    F P    TIGVEF  + + IDGK++K QIWDTAGQE FR++T +YYRGA GAL+VYDITRR TF+ ++ WL++ + H++  +  ML+G  CDL   R  +TEEG+  A+
Sbjct:    5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAK 139
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.028e-35
Identity = 71/135 (52.59%), Postives = 96/135 (71.11%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAE 464
            YLFK +IIGD+ VGKS LL ++    F P    TIGVEF  + + IDGK++K QIWDTAGQE FR++T +YYRGA GAL+VYDITRR TF+ ++ WL++ + H++  +  ML+G  CDL   R  +TEEG+  A+
Sbjct:    5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAK 139
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.028e-35
Identity = 73/135 (54.07%), Postives = 99/135 (73.33%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAE 464
            +LFK +++GDSAVGKSNLL ++    F P+S  TIGVEF ++S+ I+ K++K QIWDTAGQE+FR++T AYYRGAV A+IVYDITRR +F+S++ WL + +  S   V  +L+G   DLE+ R  ST E K  AE
Sbjct:   23 HLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAE 157
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RAB2A_RABIT (Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.028e-35
Identity = 72/134 (53.73%), Postives = 96/134 (71.64%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLA 461
            YLFK +IIGD+ VGKS LL ++    F P    TIGVEF  + + IDGK++K QIWDTAGQE FR++T +YYRGA GAL+VYDITRR TF+ ++ WL++ + HS++ +  ML+G   DLES R    EEG++ A
Sbjct:    5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFA 138
The following BLAST results are available for this feature:
BLAST of EY679500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB25_HUMAN6.439e-3855.15Ras-related protein Rab-25 OS=Homo sapiens GN=RAB2... [more]
RAB25_RABIT8.410e-3855.15Ras-related protein Rab-25 OS=Oryctolagus cuniculu... [more]
RAB25_BOVIN1.098e-3754.41Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 ... [more]
RAB25_MOUSE2.447e-3755.15Ras-related protein Rab-25 OS=Mus musculus GN=Rab2... [more]
RAB2B_MOUSE7.872e-3653.73Ras-related protein Rab-2B OS=Mus musculus GN=Rab2... [more]
RAB2B_HUMAN7.872e-3653.73Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2... [more]
YPTV4_VOLCA1.028e-3552.59GTP-binding protein yptV4 OS=Volvox carteri GN=YPT... [more]
YPTC4_CHLRE1.028e-3552.59GTP-binding protein YPTC4 OS=Chlamydomonas reinhar... [more]
RAB2B_DICDI1.028e-3554.07Ras-related protein Rab-2B OS=Dictyostelium discoi... [more]
RAB2A_RABIT1.028e-3553.73Ras-related protein Rab-2A OS=Oryctolagus cuniculu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-057-H05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679500 ID=EY679500; Name=EY679500; organism=Citrus sinensis; type=EST; length=1001bp
GAATTCAATTCAAAACGATGTCGTCGTCGGATGAAGAAGGAGGAGGAGGA
GGGGAGGAGTACTTGTTCAAGATCGTGATAATCGGCGACTCGGCGGTGGG
GAAATCGAACCTACTGTCTCGTTACGCTCGGAACGAGTTCAATCCTCACT
CGAAGGCGACAATTGGAGTCGAGTTTCAAACGCAGAGCATGGAGATCGAC
GGCAAGGAAGTCAAGGCTCAGATTTGGGACACCGCCGGCCAGGAGCGCTT
CCGCGCCGTCACTTCTGCTTACTACAGAGGCGCCGTCGGTGCTCTCATTG
TTTACGACATTACCAGGCGTACCACTTTTGACAGCATCTCTCGCTGGCTC
GATGAGCTCAAGACTCATTCTGATACCACTGTGGCATGGATGCTGGTCGG
GGAATAATGTGATTTGGAAAGTATCCGGAATGGGAGCACTGAAGAAGGTA
AAAGCCTTGCAGAATCATAAGGGGTGGTTTTCTATGGATACTTCGGCATG
GGACTCCGAGAATGGTTAAAATGGCTTTGAAAATGGCTATCAAATAGATT
TTCTGCTAAGGGCTGTTGGGAAGGTCATGGATTTTTGAAATTTTTCTAAA
GTGGAATTTTTCTTCTCTATCGGGGTAACCTCTCTGTTTAAATTGGTAAA
TCGGATGGATTCTAAGTCAAATTCATCCGATTATATTTTTCTTTGAGTGT
GTAAGGGTGGAACTTCATTTCCTTATATTTCTTATTACTTCCATATAAAC
TTTAATAACTCGCTTGAACGACTAGTTCTTCTCATTTCCTTGTTATTTCT
ACGAATTTTAAATTGGATGTTTCTATTTTTTATATATTAGATTTTTGGGT
ATTTCACTTGTTTTTTTGTTCCTCTTTACACATTATTGGGGAGCTTCCTC
TTTCTATTACGTGTCTATTGGTTCATTATATATTTTCAGAGCACACTATC
ATTATAGAGGGGGCGTTTGAGATTTACTTTTTACTGAGAATATATGCTGA
T
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