EY679500

Overview
NameEY679500
Unique NameEY679500
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1001
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RALB_MACFA (Ras-related protein Ral-B OS=Macaca fascicularis GN=RALB PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.724e-12
Identity = 44/137 (32.12%), Postives = 75/137 (54.74%), Query Frame = 3
Query:   63 LFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDEL---KTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAE 464
            L K++++G   VGKS L  ++  +EF    + T    ++ + + +DG+EV+  I DTAGQE + A+   Y+R   G L+V+ IT   +F + + + +++   K   D  +  ++VG   DLE  R    EE +S AE
Sbjct:   14 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYR-KKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEED-KIPLLVVGNKSDLEERRQVPVEEARSKAE 148          
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RALB_HUMAN (Ras-related protein Ral-B OS=Homo sapiens GN=RALB PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.724e-12
Identity = 44/137 (32.12%), Postives = 75/137 (54.74%), Query Frame = 3
Query:   63 LFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDEL---KTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAE 464
            L K++++G   VGKS L  ++  +EF    + T    ++ + + +DG+EV+  I DTAGQE + A+   Y+R   G L+V+ IT   +F + + + +++   K   D  +  ++VG   DLE  R    EE +S AE
Sbjct:   14 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYR-KKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEED-KIPLLVVGNKSDLEERRQVPVEEARSKAE 148          
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RAC9_ARATH (Rac-like GTP-binding protein ARAC9 OS=Arabidopsis thaliana GN=ARAC9 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.724e-12
Identity = 45/117 (38.46%), Postives = 64/117 (54.70%), Query Frame = 3
Query:   69 KIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSIS-RWLDELKTHSDTTVAWMLVGE*CDL 416
            K V +GD AVGK+ LL  Y  N F      T+   F    + +DGK V   +WDTAGQE +  V    YRGA   ++ + +  R +F++I+ +W+ EL+ H   TV  +LVG   DL
Sbjct:   20 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFNANVL-VDGKTVNLGLWDTAGQEDYNRVRPLSYRGADVFILAFSLISRPSFENIAKKWVPELR-HYAPTVPIVLVGTKSDL 134          
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RASK_MSVKI (GTPase KRas OS=Kirsten murine sarcoma virus GN=K-RAS PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.558e-12
Identity = 48/135 (35.56%), Postives = 71/135 (52.59%), Query Frame = 3
Query:   66 FKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDT-TVAWMLVGE*CDLESIRNGSTEEGKSLAES 467
            +K+V++G S VGKS L  +  +N F      TI   ++ Q + IDG+     I DT GQE + A+   Y R   G L V+ I    +F+ I  + ++LK   D+  V  +LVG  CDL S R   T++ + LA S
Sbjct:    4 YKLVVVGASGVGKSALTIQLIQNHFVDEYDPTIQDSYRKQVV-IDGETCLLDILDTTGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQLKRVKDSEDVPMVLVGNKCDLPS-RTVDTKQAQELARS 136          
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RAS2_RHIRA (Ras-like protein 2 OS=Rhizomucor racemosus GN=RAS2 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.558e-12
Identity = 43/134 (32.09%), Postives = 70/134 (52.24%), Query Frame = 3
Query:   66 FKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTT-VAWMLVGE*CDLESIRNGSTEEGKSLAE 464
            +KIV++GD  VGKS +  ++ ++ F      TI   ++ Q + ID +     I DTAGQE + A+   + R   G +++Y IT   TF+ + +  +++    D      +LVG  CDLE  R   T  G+ LA+
Sbjct:   12 YKIVMVGDGGVGKSAMTIQFIQSTFVDEYDPTIEDSYRKQCL-IDSECAMLDILDTAGQEEYSAMRERFMRNGEGFVLIYSITSYHTFEQVQKLHEQIARVKDLEHFPMVLVGNKCDLEQDRQVPTSAGRDLAK 144          
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RALA_DROME (Ras-related protein Ral-a OS=Drosophila melanogaster GN=Rala PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.558e-12
Identity = 40/123 (32.52%), Postives = 70/123 (56.91%), Query Frame = 3
Query:   63 LFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDE-LKTHSDTTVAWMLVGE*CDLESIR 428
            L K++++G   VGKS L  ++  +EF    + T    ++ + + +DG+EV+  I DTAGQE + A+   Y+R   G L V+ IT   +F +   + ++ L+  +D ++ ++LVG  CDL   R
Sbjct:   11 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYR-KKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVGNKCDLNDKR 132          
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RHB1_SCHPO (GTP-binding protein rhb1 OS=Schizosaccharomyces pombe GN=rhb1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.647e-12
Identity = 44/132 (33.33%), Postives = 75/132 (56.82%), Query Frame = 3
Query:   69 KIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTT-VAWMLVGE*CDLESIRNGSTEEGKSLA 461
            +I ++G  +VGKS+L  +Y  N F      TI   F +++++  G+E   +I DTAGQ+ +  + S +  G  G ++VY IT +++F+ +    D++  H+ T  V  ++VG   DL   R  + EEGK+LA
Sbjct:    8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTF-SKNIKYKGQEFATEIIDTAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQRAVTAEEGKALA 138          
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RAS_CARAU (Ras-like protein (Fragment) OS=Carassius auratus PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.647e-12
Identity = 47/135 (34.81%), Postives = 72/135 (53.33%), Query Frame = 3
Query:   66 FKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDT-TVAWMLVGE*CDLESIRNGSTEEGKSLAES 467
            +K+V++G   VGKS L  +  +N F      TI   ++ Q + IDG+     I DTAGQE + A+   Y R   G L V+ I    +F+ I  + +++K   D+  V  +LVG  CDL S R+  T++ + LA S
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPS-RSVDTKQAQDLARS 136          
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RAS_BOTFU (Ras-like protein OS=Botryotinia fuckeliana GN=ras1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.647e-12
Identity = 45/134 (33.58%), Postives = 70/134 (52.24%), Query Frame = 3
Query:   66 FKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDE-LKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAE 464
            +K+V++G   VGKS L  +  ++ F      TI   ++ Q + ID +     + DTAGQE + A+   Y R   G L+VY IT R +F+ I  +  + L+         ++VG  CDLE  R  S +EG+ LA+
Sbjct:    9 YKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCV-IDEEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKDKDYFPIIVVGNKCDLEGERQVSKQEGQQLAD 141          
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RASK_CYPCA (GTPase KRas OS=Cyprinus carpio GN=kras PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.647e-12
Identity = 47/135 (34.81%), Postives = 72/135 (53.33%), Query Frame = 3
Query:   66 FKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDT-TVAWMLVGE*CDLESIRNGSTEEGKSLAES 467
            +K+V++G   VGKS L  +  +N F      TI   ++ Q + IDG+     I DTAGQE + A+   Y R   G L V+ I    +F+ I  + +++K   D+  V  +LVG  CDL S R+  T++ + LA S
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPS-RSVDTKQAQDLARS 136          
The following BLAST results are available for this feature:
BLAST of EY679500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RALB_MACFA2.724e-1232.12Ras-related protein Ral-B OS=Macaca fascicularis G... [more]
RALB_HUMAN2.724e-1232.12Ras-related protein Ral-B OS=Homo sapiens GN=RALB ... [more]
RAC9_ARATH2.724e-1238.46Rac-like GTP-binding protein ARAC9 OS=Arabidopsis ... [more]
RASK_MSVKI3.558e-1235.56GTPase KRas OS=Kirsten murine sarcoma virus GN=K-R... [more]
RAS2_RHIRA3.558e-1232.09Ras-like protein 2 OS=Rhizomucor racemosus GN=RAS2... [more]
RALA_DROME3.558e-1232.52Ras-related protein Ral-a OS=Drosophila melanogast... [more]
RHB1_SCHPO4.647e-1233.33GTP-binding protein rhb1 OS=Schizosaccharomyces po... [more]
RAS_CARAU4.647e-1234.81Ras-like protein (Fragment) OS=Carassius auratus P... [more]
RAS_BOTFU4.647e-1233.58Ras-like protein OS=Botryotinia fuckeliana GN=ras1... [more]
RASK_CYPCA4.647e-1234.81GTPase KRas OS=Cyprinus carpio GN=kras PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-057-H05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679500 ID=EY679500; Name=EY679500; organism=Citrus sinensis; type=EST; length=1001bp
GAATTCAATTCAAAACGATGTCGTCGTCGGATGAAGAAGGAGGAGGAGGA
GGGGAGGAGTACTTGTTCAAGATCGTGATAATCGGCGACTCGGCGGTGGG
GAAATCGAACCTACTGTCTCGTTACGCTCGGAACGAGTTCAATCCTCACT
CGAAGGCGACAATTGGAGTCGAGTTTCAAACGCAGAGCATGGAGATCGAC
GGCAAGGAAGTCAAGGCTCAGATTTGGGACACCGCCGGCCAGGAGCGCTT
CCGCGCCGTCACTTCTGCTTACTACAGAGGCGCCGTCGGTGCTCTCATTG
TTTACGACATTACCAGGCGTACCACTTTTGACAGCATCTCTCGCTGGCTC
GATGAGCTCAAGACTCATTCTGATACCACTGTGGCATGGATGCTGGTCGG
GGAATAATGTGATTTGGAAAGTATCCGGAATGGGAGCACTGAAGAAGGTA
AAAGCCTTGCAGAATCATAAGGGGTGGTTTTCTATGGATACTTCGGCATG
GGACTCCGAGAATGGTTAAAATGGCTTTGAAAATGGCTATCAAATAGATT
TTCTGCTAAGGGCTGTTGGGAAGGTCATGGATTTTTGAAATTTTTCTAAA
GTGGAATTTTTCTTCTCTATCGGGGTAACCTCTCTGTTTAAATTGGTAAA
TCGGATGGATTCTAAGTCAAATTCATCCGATTATATTTTTCTTTGAGTGT
GTAAGGGTGGAACTTCATTTCCTTATATTTCTTATTACTTCCATATAAAC
TTTAATAACTCGCTTGAACGACTAGTTCTTCTCATTTCCTTGTTATTTCT
ACGAATTTTAAATTGGATGTTTCTATTTTTTATATATTAGATTTTTGGGT
ATTTCACTTGTTTTTTTGTTCCTCTTTACACATTATTGGGGAGCTTCCTC
TTTCTATTACGTGTCTATTGGTTCATTATATATTTTCAGAGCACACTATC
ATTATAGAGGGGGCGTTTGAGATTTACTTTTTACTGAGAATATATGCTGA
T
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