EY679491

Overview
NameEY679491
Unique NameEY679491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length982
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_CAPAN (Histone H3.3 OS=Capsicum annuum PE=2 SV=3)

HSP 1 Score: 217.238 bits (552), Expect = 1.136e-55
Identity = 112/117 (95.73%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AVLALQE  EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_ARATH (Histone H3.3 OS=Arabidopsis thaliana GN=HTR4 PE=1 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 1.136e-55
Identity = 112/117 (95.73%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AVLALQE  EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H3_URECA (Histone H3 OS=Urechis caupo PE=1 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 9.614e-55
Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H3_TIGCA (Histone H3 OS=Tigriopus californicus PE=3 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 9.614e-55
Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H3_PLADU (Histone H3 OS=Platynereis dumerilii PE=3 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 9.614e-55
Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H3_DROME (Histone H3 OS=Drosophila melanogaster GN=His3 PE=1 SV=4)

HSP 1 Score: 214.157 bits (544), Expect = 9.614e-55
Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H3_DROHY (Histone H3 OS=Drosophila hydei GN=His3 PE=3 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 9.614e-55
Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H3_CHITH (Histone H3 OS=Chironomus thummi thummi PE=3 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 9.614e-55
Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H32_XENTR (Histone H3.2 OS=Xenopus tropicalis GN=TGas081o10.1 PE=2 SV=3)

HSP 1 Score: 214.157 bits (544), Expect = 9.614e-55
Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H32_XENLA (Histone H3.2 OS=Xenopus laevis PE=1 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 9.614e-55
Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
The following BLAST results are available for this feature:
BLAST of EY679491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H33_CAPAN1.136e-5595.73Histone H3.3 OS=Capsicum annuum PE=2 SV=3[more]
H33_ARATH1.136e-5595.73Histone H3.3 OS=Arabidopsis thaliana GN=HTR4 PE=1 ... [more]
H3_URECA9.614e-5593.16Histone H3 OS=Urechis caupo PE=1 SV=2[more]
H3_TIGCA9.614e-5593.16Histone H3 OS=Tigriopus californicus PE=3 SV=2[more]
H3_PLADU9.614e-5593.16Histone H3 OS=Platynereis dumerilii PE=3 SV=2[more]
H3_DROME9.614e-5593.16Histone H3 OS=Drosophila melanogaster GN=His3 PE=1... [more]
H3_DROHY9.614e-5593.16Histone H3 OS=Drosophila hydei GN=His3 PE=3 SV=2[more]
H3_CHITH9.614e-5593.16Histone H3 OS=Chironomus thummi thummi PE=3 SV=2[more]
H32_XENTR9.614e-5593.16Histone H3.2 OS=Xenopus tropicalis GN=TGas081o10.1... [more]
H32_XENLA9.614e-5593.16Histone H3.2 OS=Xenopus laevis PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-057-G08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679491 ID=EY679491; Name=EY679491; organism=Citrus sinensis; type=EST; length=982bp
CCCGCGTCCGGAGAAATTGAGTAGAGGAGTTGAATAAACTCAGAGATGGC
CCGTACCAAGCAAACTGCACGTAAGTCAACCGGAGGAAAGGCTCCTAGGA
AGCAACTTGCTACCAAGGCCGCCCGTAAGTCTGCGCCCACCACCGGTGGT
GTTAAGAAGCCTCATCGTTACCGTCCTGGAACCGTCGCCCTTCGAGAAAT
TCGCAAGTACCAGAAGAGTACCGAGCTGCTTATCAGGAAACTCCCATTCC
AGAGACTTGTTCGTGAAATTGCTCAGGACTTTAAGACTGATCTGCGTTTC
CAGAGCCCTGCAGTGCTGGCTCTGCAGGAGGGAACGGAGGCTTACCTTGT
TGGTCACTTCGAGGACACTAACCTCTGCGCCATTCCTGCTAAGCGGTGCT
CCAATTATGCCCTAGGACATTTAGTTTGACCGTAAGATCCGTGGAAAGGC
GTGCTTTAACGAAATTGTTGGTATGCTCTCTTTTTTAATGATCGGATAGG
CAAGGGGGCCTTTGAAATGGGATTATGTTTGTTCGTGTGAGATTTTTTAA
GAGGTGTTTATTTATATTAATATGTTTTTGATAAGTGCAATTATATTGAT
ACTAATGAAAATGAATCAAAATTAATGTATTTAAATATTATTATTTAAAA
TATTAAACGTAAATAATACCATATAAATGAAAAAAAAGAATTAAGAAAAA
AAATAACGATTATAACAATAGAATTAATAATGTTTAATAGATATTGAACA
CCATCCTCGATAATATTATTAATAGACAAGATATCGAGGTTGTGGACCAG
TTTGTTTATATATTGTGTATTAGTATAGCGTTATAATTCATTTTTGAAGA
ACCTAGAGATATAACTCATACAGAGTTAGAAGTATCTTTCTGATACATTT
TTTTCTATTGAAATAGAAGATATTATAAGATTAATGATACAATTATAGAT
TCGAGGGATAATAATAAAGTTTTTTTCAGTAC
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