EY679491

Overview
NameEY679491
Unique NameEY679491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length982
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H3_PYCHE (Histone H3, embryonic OS=Pycnopodia helianthoides PE=2 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 2.797e-54
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRFQS AV+ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H3_PSAMI (Histone H3, embryonic OS=Psammechinus miliaris PE=2 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 2.797e-54
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRFQS AV+ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H3_PISOC (Histone H3, embryonic OS=Pisaster ochraceus PE=2 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 2.797e-54
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRFQS AV+ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H3_PISBR (Histone H3, embryonic OS=Pisaster brevispinus PE=2 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 2.797e-54
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRFQS AV+ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H3_PARLI (Histone H3, embryonic OS=Paracentrotus lividus PE=2 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 2.797e-54
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRFQS AV+ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H3_LYTPI (Histone H3, embryonic OS=Lytechinus pictus PE=2 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 2.797e-54
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRFQS AV+ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H3_DERIM (Histone H3, embryonic OS=Dermasterias imbricata PE=2 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 2.797e-54
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRFQS AV+ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H3_ACRFO (Histone H3 OS=Acropora formosa PE=3 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 2.797e-54
Identity = 109/117 (93.16%), Postives = 111/117 (94.87%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAA KSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AVLALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAAAKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H32_CRILO (Histone H3.2 OS=Cricetulus longicaudatus PE=2 SV=3)

HSP 1 Score: 212.616 bits (540), Expect = 2.797e-54
Identity = 108/117 (92.31%), Postives = 111/117 (94.87%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTV LREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVTLREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H32_TOBAC (Histone H3.2 OS=Nicotiana tabacum GN=B34 PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.653e-54
Identity = 109/117 (93.16%), Postives = 110/117 (94.02%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQE  EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKR 117
The following BLAST results are available for this feature:
BLAST of EY679491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H3_PYCHE2.797e-5492.31Histone H3, embryonic OS=Pycnopodia helianthoides ... [more]
H3_PSAMI2.797e-5492.31Histone H3, embryonic OS=Psammechinus miliaris PE=... [more]
H3_PISOC2.797e-5492.31Histone H3, embryonic OS=Pisaster ochraceus PE=2 S... [more]
H3_PISBR2.797e-5492.31Histone H3, embryonic OS=Pisaster brevispinus PE=2... [more]
H3_PARLI2.797e-5492.31Histone H3, embryonic OS=Paracentrotus lividus PE=... [more]
H3_LYTPI2.797e-5492.31Histone H3, embryonic OS=Lytechinus pictus PE=2 SV... [more]
H3_DERIM2.797e-5492.31Histone H3, embryonic OS=Dermasterias imbricata PE... [more]
H3_ACRFO2.797e-5493.16Histone H3 OS=Acropora formosa PE=3 SV=2[more]
H32_CRILO2.797e-5492.31Histone H3.2 OS=Cricetulus longicaudatus PE=2 SV=3[more]
H32_TOBAC3.653e-5493.16Histone H3.2 OS=Nicotiana tabacum GN=B34 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-057-G08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679491 ID=EY679491; Name=EY679491; organism=Citrus sinensis; type=EST; length=982bp
CCCGCGTCCGGAGAAATTGAGTAGAGGAGTTGAATAAACTCAGAGATGGC
CCGTACCAAGCAAACTGCACGTAAGTCAACCGGAGGAAAGGCTCCTAGGA
AGCAACTTGCTACCAAGGCCGCCCGTAAGTCTGCGCCCACCACCGGTGGT
GTTAAGAAGCCTCATCGTTACCGTCCTGGAACCGTCGCCCTTCGAGAAAT
TCGCAAGTACCAGAAGAGTACCGAGCTGCTTATCAGGAAACTCCCATTCC
AGAGACTTGTTCGTGAAATTGCTCAGGACTTTAAGACTGATCTGCGTTTC
CAGAGCCCTGCAGTGCTGGCTCTGCAGGAGGGAACGGAGGCTTACCTTGT
TGGTCACTTCGAGGACACTAACCTCTGCGCCATTCCTGCTAAGCGGTGCT
CCAATTATGCCCTAGGACATTTAGTTTGACCGTAAGATCCGTGGAAAGGC
GTGCTTTAACGAAATTGTTGGTATGCTCTCTTTTTTAATGATCGGATAGG
CAAGGGGGCCTTTGAAATGGGATTATGTTTGTTCGTGTGAGATTTTTTAA
GAGGTGTTTATTTATATTAATATGTTTTTGATAAGTGCAATTATATTGAT
ACTAATGAAAATGAATCAAAATTAATGTATTTAAATATTATTATTTAAAA
TATTAAACGTAAATAATACCATATAAATGAAAAAAAAGAATTAAGAAAAA
AAATAACGATTATAACAATAGAATTAATAATGTTTAATAGATATTGAACA
CCATCCTCGATAATATTATTAATAGACAAGATATCGAGGTTGTGGACCAG
TTTGTTTATATATTGTGTATTAGTATAGCGTTATAATTCATTTTTGAAGA
ACCTAGAGATATAACTCATACAGAGTTAGAAGTATCTTTCTGATACATTT
TTTTCTATTGAAATAGAAGATATTATAAGATTAATGATACAATTATAGAT
TCGAGGGATAATAATAAAGTTTTTTTCAGTAC
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