EY679491

Overview
NameEY679491
Unique NameEY679491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length982
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_SPISO (Histone H3.3 OS=Spisula solidissima PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 4.771e-54
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_RAT (Histone H3.3 OS=Rattus norvegicus GN=H3f3b PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 4.771e-54
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_RABIT (Histone H3.3 OS=Oryctolagus cuniculus GN=H3F3A PE=2 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 4.771e-54
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_PIG (Histone H3.3 OS=Sus scrofa GN=H3F3A PE=2 SV=3)

HSP 1 Score: 211.846 bits (538), Expect = 4.771e-54
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_MOUSE (Histone H3.3 OS=Mus musculus GN=H3f3a PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 4.771e-54
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_HUMAN (Histone H3.3 OS=Homo sapiens GN=H3F3A PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 4.771e-54
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_DROME (Histone H3.3 OS=Drosophila melanogaster GN=His3.3A PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 4.771e-54
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_DROHY (Histone H3.3 OS=Drosophila hydei GN=His3.3A PE=3 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 4.771e-54
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_DANRE (Histone H3.3 OS=Danio rerio GN=h3f3a PE=2 SV=3)

HSP 1 Score: 211.846 bits (538), Expect = 4.771e-54
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_CHICK (Histone H3.3 OS=Gallus gallus GN=H3-IX PE=2 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 4.771e-54
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQE +EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKR 117
The following BLAST results are available for this feature:
BLAST of EY679491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H33_SPISO4.771e-5492.31Histone H3.3 OS=Spisula solidissima PE=1 SV=2[more]
H33_RAT4.771e-5492.31Histone H3.3 OS=Rattus norvegicus GN=H3f3b PE=1 SV... [more]
H33_RABIT4.771e-5492.31Histone H3.3 OS=Oryctolagus cuniculus GN=H3F3A PE=... [more]
H33_PIG4.771e-5492.31Histone H3.3 OS=Sus scrofa GN=H3F3A PE=2 SV=3[more]
H33_MOUSE4.771e-5492.31Histone H3.3 OS=Mus musculus GN=H3f3a PE=1 SV=2[more]
H33_HUMAN4.771e-5492.31Histone H3.3 OS=Homo sapiens GN=H3F3A PE=1 SV=2[more]
H33_DROME4.771e-5492.31Histone H3.3 OS=Drosophila melanogaster GN=His3.3A... [more]
H33_DROHY4.771e-5492.31Histone H3.3 OS=Drosophila hydei GN=His3.3A PE=3 S... [more]
H33_DANRE4.771e-5492.31Histone H3.3 OS=Danio rerio GN=h3f3a PE=2 SV=3[more]
H33_CHICK4.771e-5492.31Histone H3.3 OS=Gallus gallus GN=H3-IX PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-057-G08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679491 ID=EY679491; Name=EY679491; organism=Citrus sinensis; type=EST; length=982bp
CCCGCGTCCGGAGAAATTGAGTAGAGGAGTTGAATAAACTCAGAGATGGC
CCGTACCAAGCAAACTGCACGTAAGTCAACCGGAGGAAAGGCTCCTAGGA
AGCAACTTGCTACCAAGGCCGCCCGTAAGTCTGCGCCCACCACCGGTGGT
GTTAAGAAGCCTCATCGTTACCGTCCTGGAACCGTCGCCCTTCGAGAAAT
TCGCAAGTACCAGAAGAGTACCGAGCTGCTTATCAGGAAACTCCCATTCC
AGAGACTTGTTCGTGAAATTGCTCAGGACTTTAAGACTGATCTGCGTTTC
CAGAGCCCTGCAGTGCTGGCTCTGCAGGAGGGAACGGAGGCTTACCTTGT
TGGTCACTTCGAGGACACTAACCTCTGCGCCATTCCTGCTAAGCGGTGCT
CCAATTATGCCCTAGGACATTTAGTTTGACCGTAAGATCCGTGGAAAGGC
GTGCTTTAACGAAATTGTTGGTATGCTCTCTTTTTTAATGATCGGATAGG
CAAGGGGGCCTTTGAAATGGGATTATGTTTGTTCGTGTGAGATTTTTTAA
GAGGTGTTTATTTATATTAATATGTTTTTGATAAGTGCAATTATATTGAT
ACTAATGAAAATGAATCAAAATTAATGTATTTAAATATTATTATTTAAAA
TATTAAACGTAAATAATACCATATAAATGAAAAAAAAGAATTAAGAAAAA
AAATAACGATTATAACAATAGAATTAATAATGTTTAATAGATATTGAACA
CCATCCTCGATAATATTATTAATAGACAAGATATCGAGGTTGTGGACCAG
TTTGTTTATATATTGTGTATTAGTATAGCGTTATAATTCATTTTTGAAGA
ACCTAGAGATATAACTCATACAGAGTTAGAAGTATCTTTCTGATACATTT
TTTTCTATTGAAATAGAAGATATTATAAGATTAATGATACAATTATAGAT
TCGAGGGATAATAATAAAGTTTTTTTCAGTAC
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