EY679490

Overview
NameEY679490
Unique NameEY679490
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1025
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: Y053_HAEIN (Uncharacterized zinc-type alcohol dehydrogenase-like protein HI0053 OS=Haemophilus influenzae GN=HI0053 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.642e-12
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 2
Query:   29 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 322
            + G +   + HPA L  K+PDN+ + +  + EPL++ LHA  R  +    +++I+GAG IGL+  L A  +GA  I +VD+ + RL  AK LG ++IV
Sbjct:  118 IDGGMQEVIRHPAHLLTKVPDNLPIHQLPLAEPLTIALHALHRTTLKSGEHIVIIGAGAIGLMAALAAVQYGAIPI-LVDILEQRLEYAKSLGIEHIV 214          
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: TDH_IDILO (L-threonine 3-dehydrogenase OS=Idiomarina loihiensis GN=tdh PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.658e-12
Identity = 40/99 (40.40%), Postives = 60/99 (60.61%), Query Frame = 2
Query:   35 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 331
            G+ A  +  PA+  FKLPD+V+ E  A+ +P    +H     ++  E +VLI GAGPIG++    AR  GA  +VI DV++YRL +A+++G    V VS
Sbjct:  119 GAFAEYLALPAENAFKLPDDVTDEMAAVFDPFGNAVHTALAFDLVGE-DVLITGAGPIGIMAAAVARHVGARHVVITDVNEYRLDLARKMGVTRAVDVS 216          
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: TDH_ANADF (L-threonine 3-dehydrogenase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=tdh PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.658e-12
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 2
Query:   35 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 331
            GS A  VV PAD  +++PD++  E  A+ +P     H      +  E +VL+ GAGPIG++ +  AR  GA  +V+ DV+DYRL +A+ +GA   V V+
Sbjct:  120 GSFAEYVVIPADNVYRIPDDIPDEVAAIFDPYGNATHTALSFELVGE-DVLVTGAGPIGVMAVSIARHVGARHVVVTDVNDYRLGLARRMGATRAVNVA 217          
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: TDH_YERPY (L-threonine 3-dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=tdh PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.777e-12
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 2
Query:   35 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 331
            GS A  +V PA   FK+PDN+S E  A+ +P    +H     ++  E +VL+ GAGPIG++     +  GA  +VI DV++YRL +A+++G    V VS
Sbjct:  119 GSFAEYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVCKHVGARHVVITDVNEYRLDLARKMGVTRAVNVS 216          
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: TDH_YERPS (L-threonine 3-dehydrogenase OS=Yersinia pseudotuberculosis GN=tdh PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.777e-12
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 2
Query:   35 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 331
            GS A  +V PA   FK+PDN+S E  A+ +P    +H     ++  E +VL+ GAGPIG++     +  GA  +VI DV++YRL +A+++G    V VS
Sbjct:  119 GSFAEYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVCKHVGARHVVITDVNEYRLDLARKMGVTRAVNVS 216          
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: TDH_YERPP (L-threonine 3-dehydrogenase OS=Yersinia pestis (strain Pestoides F) GN=tdh PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.777e-12
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 2
Query:   35 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 331
            GS A  +V PA   FK+PDN+S E  A+ +P    +H     ++  E +VL+ GAGPIG++     +  GA  +VI DV++YRL +A+++G    V VS
Sbjct:  119 GSFAEYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVCKHVGARHVVIADVNEYRLDLARKMGVTRAVNVS 216          
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: TDH_YERPN (L-threonine 3-dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=tdh PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.777e-12
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 2
Query:   35 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 331
            GS A  +V PA   FK+PDN+S E  A+ +P    +H     ++  E +VL+ GAGPIG++     +  GA  +VI DV++YRL +A+++G    V VS
Sbjct:  119 GSFAEYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVCKHVGARHVVIADVNEYRLDLARKMGVTRAVNVS 216          
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: TDH_YERPG (L-threonine 3-dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=tdh PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.777e-12
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 2
Query:   35 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 331
            GS A  +V PA   FK+PDN+S E  A+ +P    +H     ++  E +VL+ GAGPIG++     +  GA  +VI DV++YRL +A+++G    V VS
Sbjct:  119 GSFAEYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVCKHVGARHVVIADVNEYRLDLARKMGVTRAVNVS 216          
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: TDH_YERPE (L-threonine 3-dehydrogenase OS=Yersinia pestis GN=tdh PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.777e-12
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 2
Query:   35 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 331
            GS A  +V PA   FK+PDN+S E  A+ +P    +H     ++  E +VL+ GAGPIG++     +  GA  +VI DV++YRL +A+++G    V VS
Sbjct:  119 GSFAEYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVCKHVGARHVVIADVNEYRLDLARKMGVTRAVNVS 216          
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: TDH_YERPB (L-threonine 3-dehydrogenase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=tdh PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.777e-12
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 2
Query:   35 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 331
            GS A  +V PA   FK+PDN+S E  A+ +P    +H     ++  E +VL+ GAGPIG++     +  GA  +VI DV++YRL +A+++G    V VS
Sbjct:  119 GSFAEYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVCKHVGARHVVITDVNEYRLDLARKMGVTRAVNVS 216          
The following BLAST results are available for this feature:
BLAST of EY679490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
Y053_HAEIN1.642e-1238.78Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
TDH_IDILO3.658e-1240.40L-threonine 3-dehydrogenase OS=Idiomarina loihiens... [more]
TDH_ANADF3.658e-1239.39L-threonine 3-dehydrogenase OS=Anaeromyxobacter sp... [more]
TDH_YERPY4.777e-1239.39L-threonine 3-dehydrogenase OS=Yersinia pseudotube... [more]
TDH_YERPS4.777e-1239.39L-threonine 3-dehydrogenase OS=Yersinia pseudotube... [more]
TDH_YERPP4.777e-1239.39L-threonine 3-dehydrogenase OS=Yersinia pestis (st... [more]
TDH_YERPN4.777e-1239.39L-threonine 3-dehydrogenase OS=Yersinia pestis bv.... [more]
TDH_YERPG4.777e-1239.39L-threonine 3-dehydrogenase OS=Yersinia pestis bv.... [more]
TDH_YERPE4.777e-1239.39L-threonine 3-dehydrogenase OS=Yersinia pestis GN=... [more]
TDH_YERPB4.777e-1239.39L-threonine 3-dehydrogenase OS=Yersinia pseudotube... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-057-G07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679490 ID=EY679490; Name=EY679490; organism=Citrus sinensis; type=EST; length=1025bp
AGAGATGAAATTTTTTGCAACTCCGCCCGTTCATGGTTCCCTGGCTAATC
AGGTGGTGCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGC
CTGGAGGAAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTG
CCGCCGTGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAG
GGCCCATAGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCT
AGAATTGTCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGA
ACTTGGTGCAGATAATATTGTTAAAGTTTCAACAAATTTGCAGGTATATT
ACTGCCCATTGCCCAGCAGAAGAGTTTAGAAAAGTAAAAGACATTCTCAA
AATCTTCATGCTCGCAATCCTTCCCTTTCTCTTAATCATCATAACAACCA
TGTTCTGTTCAACCAACTTCTGTTGCATTAAAGACCCTTGTTCCAACTTC
CTCAAGTTCTTTTTTTGGTTCTCAGTAACTTTTCTGTTCTCCTGTTTGAA
AGTTGACCACTCCTAATTCTGCATTTTTTCTTGTTTATCGAAGTAAAAGG
GGACCTTGGACTTTTGGTTCGTTTTGGAAAAATTGGTCCTGGTGCTCCCC
TCCCCTTTGGTTTTTTTTTCGCTTGGAATATCCCCGCTTTGAATTTGAGG
ATTTTTGCGGGAGCTTGCTTAAAAAATGGGAAAAAAATACCCTAAGCCCC
TGGGGGACCAGGATTATAATGTTGACTTTTAATTTGGGCGGGGCTTTATC
AATAACCTTGTTAACAAAGACTTAGAAGGGCAACCTCTGGGGAGGGGGAA
AAAATTTTTCCCCTCTGGGGAGTAGGGGGTTTTTTTTAATATTTGATTTG
TATCACTCCTCCACCCCTGCGTGTGGTTGCGAAAAAGGGAGGGGGGGGGG
AAGGTGGGGGGTGGGGGGGGTGGATTTTTTTGCAACATACCACAAAAAAC
CCACCCTTTCGCCCACCCTACTTGT
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