EY679353

Overview
NameEY679353
Unique NameEY679353
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length968
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679353 vs. ExPASy Swiss-Prot
Match: G3P_MYCGE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoplasma genitalium GN=gapA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.054e-13
Identity = 53/139 (38.13%), Postives = 75/139 (53.96%), Query Frame = 2
Query:  209 AAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPDNLPLGDLGIYLVIEGTGVFVYREGCGPITFQAGWQESNYISPRAGGNIQPIV 625
            A    +KVAINGFGRIGR   R    + +  +EVVAIND    +  +HLLKYDS  G  +  +  V  + + +D K + V S ++P NLP  +  I +VIE TG FV  EG   +  +AG +     +P     I+ +V
Sbjct:    3 AKNRTIKVAINGFGRIGRLVFRSLLSKAN--VEVVAINDLTQPEVLAHLLKYDSAHGELKRKIT-VKQNILQIDRKKVYVFSEKDPQNLPWDEHDIDVVIESTGRFVSEEGAS-LHLKAGAKRVIISAPAKEKTIRTVV 137          
BLAST of EY679353 vs. ExPASy Swiss-Prot
Match: G3P1_CANGA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Candida glabrata GN=GPD1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.054e-13
Identity = 48/106 (45.28%), Postives = 65/106 (61.32%), Query Frame = 2
Query:  224 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQ-ASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPDNLPLGDLGIYLVIEGTGVFVYRE 538
            ++VAINGFGRIGR  LR     K   ++VVAIND       A+++ KYDST G ++ +V     D I +DGK I+    R+P +LP GD  I +VIE TGVF  ++
Sbjct:    2 VRVAINGFGRIGRIVLRI--AMKRDGIDVVAINDPFITNDYAAYMFKYDSTHGRYDGEVTHDDKDLI-IDGKAIKCYQERDPADLPWGDNDIDIVIEATGVFTAKD 104          
BLAST of EY679353 vs. ExPASy Swiss-Prot
Match: G3P_KLEPN (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Klebsiella pneumoniae GN=gap PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.989e-13
Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 2
Query:  236 INGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPDNLPLGDLGIYLVIEGTGVFVYRE 538
            INGFGRIGR   R    +K S +E+VAIND    +  +++LKYDST G F+  V+ V    + V+GK I+V + R+P NL   ++G+ +V E TG+F+  E
Sbjct:    1 INGFGRIGRIVFRA--AQKRSDIEIVAINDLLDAEYMAYMLKYDSTHGRFDGTVE-VKDGHLVVNGKKIRVTAERDPANLKWDEVGVDVVAEATGIFLTDE 98          
BLAST of EY679353 vs. ExPASy Swiss-Prot
Match: E4PD_PROMH (D-erythrose-4-phosphate dehydrogenase OS=Proteus mirabilis (strain HI4320) GN=epd PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.210e-13
Identity = 43/102 (42.16%), Postives = 65/102 (63.73%), Query Frame = 2
Query:  224 LKVAINGFGRIGRNFLRC-WHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPDNLPLGDLGIYLVIEGTGVF 526
            ++VAINGFGRIGRN LR  +   K + + VVAIN+       +HLLKYDS+ G F  D++ V  D + V    I++  + +  +LP G+LGI +V++ +GV+
Sbjct:    3 IRVAINGFGRIGRNVLRALYESGKRAEISVVAINELADATGIAHLLKYDSSHGRFAWDIR-VNNDLLQVGDDAIRLFHHADIADLPWGELGIDVVLDCSGVY 103          
BLAST of EY679353 vs. ExPASy Swiss-Prot
Match: G3P_ASHGO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya gossypii GN=GPD PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.804e-13
Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = 2
Query:  224 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPDNLPLGDLGIYLVIEGTGVF 526
            +KVAING G+IGR  +R    R +  +EVVAIND    V  A+++ KYDST G +  DV+  G   + +DGK I+V   R+P  LP G+ GI + I+ TGVF
Sbjct:    2 VKVAINGLGKIGRLVMRIALSRAN--VEVVAINDPFITVDYAAYMFKYDSTHGKYAGDVQYEGNT-LVIDGKKIKVFQERDPAQLPWGEEGIDIAIDSTGVF 100          
BLAST of EY679353 vs. ExPASy Swiss-Prot
Match: G3P1_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces marxianus GN=GAP1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.804e-13
Identity = 44/102 (43.14%), Postives = 66/102 (64.71%), Query Frame = 2
Query:  224 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPDNLPLGDLGIYLVIEGTGVF 526
            + +AINGFGRIGR  LR    RK+  ++VVAIND    V  A+++ KYDST G ++ +V   G++ I ++GK + V   ++P  LP G LG+ + ++ TGVF
Sbjct:    2 VSIAINGFGRIGRLVLRIALERKN--IDVVAINDPFISVDYAAYMFKYDSTHGKYKGEVSHDGSNLI-INGKKVAVFQEKDPATLPWGKLGVDIAVDSTGVF 100          
BLAST of EY679353 vs. ExPASy Swiss-Prot
Match: G3P_DEBHA (Glyceraldehyde-3-phosphate dehydrogenase OS=Debaryomyces hansenii GN=GPD PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.887e-13
Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 2
Query:  224 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPDNLPLGDLGIYLVIEGTGVFVYREG 541
            + + INGFGRIGR  LR    R D  ++VVA+ND     + A+++ KYDST G ++ +V     D + +DG+ I+V   ++P ++P G  G+  VIE TGVF   EG
Sbjct:    3 ITIGINGFGRIGRLVLRIALQRSD--IKVVAVNDPFIAPEYAAYMFKYDSTHGRYKGEVTSKD-DSLVIDGQSIKVFGEKDPASIPWGKAGVDYVIESTGVFTTTEG 106          
BLAST of EY679353 vs. ExPASy Swiss-Prot
Match: G3P_COLLN (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum lindemuthianum GN=GPDA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.161e-12
Identity = 43/104 (41.35%), Postives = 64/104 (61.54%), Query Frame = 2
Query:  218 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPDNLPLGDLGIYLVIEGTGVF 526
            A +KV INGFGRIGR   R  +  +   +E+VA+ND     K A+++LKYDST GIF  ++   G D + ++GK ++  + R+P  +P  + G   V+E TGVF
Sbjct:    2 APIKVGINGFGRIGRIVFR--NAVEHPDVEIVAVNDPFIETKYAAYMLKYDSTHGIFNGEIAQDGND-LVINGKKVKFYTERDPAVIPWKETGADYVVESTGVF 102          
BLAST of EY679353 vs. ExPASy Swiss-Prot
Match: G3P3_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluyveromyces marxianus GN=GAP3 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.161e-12
Identity = 46/102 (45.10%), Postives = 63/102 (61.76%), Query Frame = 2
Query:  224 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPDNLPLGDLGIYLVIEGTGVF 526
            +++AINGFGRIGR  LR    RK+  +EVVAIND    V  A+++ KYDST G F+ +V   G   + +DGK + V   R+P  LP G   I + I+ TG+F
Sbjct:    2 VRIAINGFGRIGRLVLRIALSRKN--IEVVAINDPFITVDYAAYMFKYDSTHGRFDGEVSHDGK-ALIIDGKKVLVFQERDPATLPWGAEKIDIAIDSTGIF 100          
BLAST of EY679353 vs. ExPASy Swiss-Prot
Match: G3P2_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces marxianus GN=GAP2 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.161e-12
Identity = 47/102 (46.08%), Postives = 63/102 (61.76%), Query Frame = 2
Query:  224 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPDNLPLGDLGIYLVIEGTGVF 526
            +++AINGFGRIGR  LR    RK+  +EVVAIND    V  A+++ KYDST G F+ +V   G   I +DGK + V   R+P  LP G   I + I+ TG+F
Sbjct:    2 VRIAINGFGRIGRLVLRIALSRKN--IEVVAINDPFITVDYAAYMFKYDSTHGRFDGEVSHDGKSLI-IDGKKVLVFQERDPATLPWGAEKIDIAIDSTGIF 100          
The following BLAST results are available for this feature:
BLAST of EY679353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
G3P_MYCGE3.054e-1338.13Glyceraldehyde-3-phosphate dehydrogenase OS=Mycopl... [more]
G3P1_CANGA3.054e-1345.28Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Cand... [more]
G3P_KLEPN3.989e-1343.56Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
E4PD_PROMH5.210e-1342.16D-erythrose-4-phosphate dehydrogenase OS=Proteus m... [more]
G3P_ASHGO6.804e-1346.08Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya... [more]
G3P1_KLUMA6.804e-1343.14Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluy... [more]
G3P_DEBHA8.887e-1341.12Glyceraldehyde-3-phosphate dehydrogenase OS=Debary... [more]
G3P_COLLN1.161e-1241.35Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P3_KLUMA1.161e-1245.10Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluy... [more]
G3P2_KLUMA1.161e-1246.08Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-059-C04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679353 ID=EY679353; Name=EY679353; organism=Citrus sinensis; type=EST; length=968bp
CATCCAGCAAATACCTATCATGGCTTCGGCCACTCTCTCTGTAGCCAAAT
CAGCTCTTCAGGGAAATGGTAAGGGATTCTCAGAATTCTCAGGTCTACGC
AACTCTGCAAGCCTTCCTTTTGGCAGGAAATCTTCTGATGACTTCCATTC
AGTCATTGCTCTCCAGACCTCTGCTTTAGGAAGCAGCAGCAGCGGGTACA
GGAAGGTTGCTGCTCAGGCAAAGCTGAAGGTTGCAATCAATGGGTTTGGT
AGAATTGGTAGGAACTTCTTGAGGTGCTGGCACGGCCGCAAGGACTCTCC
ACTTGAAGTCGTTGCCATCAATGACACCGGAGGTGTCAAGCAGGCCTCTC
ACCTCCTCAAGTACGACTCCACCCTTGGCATCTTTGAAGCCGATGTTAAA
CCAGTTGGTACTGATGGCATCTCTGTTGATGGCAAGGTCATCCAGGTTGT
TTCTAACCGCAACCCCGACAATCTCCCCTTGGGGGACTTGGGCATCTACC
TTGTGATTGAAGGGACAGGAGTGTTTGTTTACAGAGAGGGGTGCGGGCCA
ATCACATTTCAGGCTGGTTGGCAAGAAAGTAATTATATAAGCCCCCGGGC
AGGGGGGAACATCCAACCCATTGTTGTTTGGATGTCAAATGGTGAAGTTT
AAAAGCACAAAATGAGCCTAATTATAGTAAATGTTTTATTGTACAACACA
ATGGTCTAGGATCACTTAGAAGAAGGTTTCTTTGAACCACATAGTATGGG
CATTATTCAAAGGGGAACAAAGGACCCACAACATCTTACATAAATGTGTA
TTATCTAAAAGGTAATCTATATAGTTAATACCAACCGTAGAAATAAAGAA
GTGGGAACAAAATAGTCATGACTATCTATAATATTATCCCCCCAACACTC
CATTTGTGATGGCTGAGACAAAAGATACTGGCAGGACCCCTGTGCTCTTT
CTCCCCAGTTTCATCACA
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