EY679352

Overview
NameEY679352
Unique NameEY679352
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679352 vs. ExPASy Swiss-Prot
Match: S61A1_PONAB (Protein transport protein Sec61 subunit alpha isoform 1 OS=Pongo abelii GN=SEC61A1 PE=2 SV=3)

HSP 1 Score: 194.897 bits (494), Expect = 5.547e-49
Identity = 113/221 (51.13%), Postives = 149/221 (67.42%), Query Frame = 3
Query:  171 RVLHLVRPFLAFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIIIAIGESSCLCSLRNVW*C*PTWSREWPSYL---------VQLCYGGIMGSVLNELPSKGKGLGTGIPLIIATNVWGNFLGESLLFPPTITMGTGK-QNFKG 803
            + L +++PF   LPE+Q  +RK+ F+EKV++T I+LFIFLVC Q+PL+GI S+  ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV  +  +DRAL NGAQKL G+II IG+S              T     PS +         +QL   G++  +L+EL  KG GLG+GI L IATN+    + ++  F PT T+ TG+   F+G
Sbjct:    4 KFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQSIVYVM---------TGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA--FSPT-TVNTGRGMEFEG 211          
BLAST of EY679352 vs. ExPASy Swiss-Prot
Match: S61A1_MOUSE (Protein transport protein Sec61 subunit alpha isoform 1 OS=Mus musculus GN=Sec61a1 PE=2 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 5.547e-49
Identity = 113/221 (51.13%), Postives = 149/221 (67.42%), Query Frame = 3
Query:  171 RVLHLVRPFLAFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIIIAIGESSCLCSLRNVW*C*PTWSREWPSYL---------VQLCYGGIMGSVLNELPSKGKGLGTGIPLIIATNVWGNFLGESLLFPPTITMGTGK-QNFKG 803
            + L +++PF   LPE+Q  +RK+ F+EKV++T I+LFIFLVC Q+PL+GI S+  ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV  +  +DRAL NGAQKL G+II IG+S              T     PS +         +QL   G++  +L+EL  KG GLG+GI L IATN+    + ++  F PT T+ TG+   F+G
Sbjct:    4 KFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQSIVYVM---------TGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA--FSPT-TVNTGRGMEFEG 211          
BLAST of EY679352 vs. ExPASy Swiss-Prot
Match: S61A1_HUMAN (Protein transport protein Sec61 subunit alpha isoform 1 OS=Homo sapiens GN=SEC61A1 PE=1 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 5.547e-49
Identity = 113/221 (51.13%), Postives = 149/221 (67.42%), Query Frame = 3
Query:  171 RVLHLVRPFLAFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIIIAIGESSCLCSLRNVW*C*PTWSREWPSYL---------VQLCYGGIMGSVLNELPSKGKGLGTGIPLIIATNVWGNFLGESLLFPPTITMGTGK-QNFKG 803
            + L +++PF   LPE+Q  +RK+ F+EKV++T I+LFIFLVC Q+PL+GI S+  ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV  +  +DRAL NGAQKL G+II IG+S              T     PS +         +QL   G++  +L+EL  KG GLG+GI L IATN+    + ++  F PT T+ TG+   F+G
Sbjct:    4 KFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQSIVYVM---------TGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA--FSPT-TVNTGRGMEFEG 211          
BLAST of EY679352 vs. ExPASy Swiss-Prot
Match: S61A1_CANFA (Protein transport protein Sec61 subunit alpha isoform 1 OS=Canis familiaris GN=SEC61A1 PE=1 SV=3)

HSP 1 Score: 194.897 bits (494), Expect = 5.547e-49
Identity = 113/221 (51.13%), Postives = 149/221 (67.42%), Query Frame = 3
Query:  171 RVLHLVRPFLAFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIIIAIGESSCLCSLRNVW*C*PTWSREWPSYL---------VQLCYGGIMGSVLNELPSKGKGLGTGIPLIIATNVWGNFLGESLLFPPTITMGTGK-QNFKG 803
            + L +++PF   LPE+Q  +RK+ F+EKV++T I+LFIFLVC Q+PL+GI S+  ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV  +  +DRAL NGAQKL G+II IG+S              T     PS +         +QL   G++  +L+EL  KG GLG+GI L IATN+    + ++  F PT T+ TG+   F+G
Sbjct:    4 KFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQSIVYVM---------TGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA--FSPT-TVNTGRGMEFEG 211          
BLAST of EY679352 vs. ExPASy Swiss-Prot
Match: S61A2_DANRE (Protein transport protein Sec61 subunit alpha-like 2 OS=Danio rerio GN=sec61al2 PE=2 SV=3)

HSP 1 Score: 193.741 bits (491), Expect = 1.236e-48
Identity = 106/211 (50.24%), Postives = 146/211 (69.19%), Query Frame = 3
Query:  171 RVLHLVRPFLAFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIIIAIGESSCLCSLRNVW*C*PTWSREWPSYLVQLCYGGIMGSVLNELPSKGKGLGTGIPLIIATNVWGNFLGESLLFPPTITMGTGKQNFKG 803
            + L +++PF A LPE+Q  +R++ F+EKV++T I+LFIFLVC Q+PL+GI S+  ADPFYWMRVI+ASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV  +  +DRAL NGAQKL G+II IG++                +      ++QL   G++  +L+EL  KG GLG+GI L IATN+    + ++   P T+  G G + F+G
Sbjct:    4 KFLEVIKPFCAVLPEIQKPERRIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVIMASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAVVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA-FSPTTVNTGRGTE-FEG 211          
BLAST of EY679352 vs. ExPASy Swiss-Prot
Match: SC61A_YARLI (Protein transport protein SEC61 subunit alpha OS=Yarrowia lipolytica GN=SEC61 PE=3 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 2.948e-42
Identity = 94/213 (44.13%), Postives = 140/213 (65.73%), Query Frame = 3
Query:  165 GFRVLHLVRPFLAFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIIIAIGESSCLCSLRNVW*C*PTWSREWPSYLVQLCYGGIMGSVLNELPSKGKGLGTGIPLIIATNVWGNFLGESLLFPPTITMGTGKQNFKG 803
            G R L LV+PF  FLPEVQ+ +RKVPF +K+++T ++L IFLV S++PLYGI+S+  +D  YW+R++LASNRG++MELGITPIV+SG+V QLL G+++IEV+ +++ DR L   AQKL  II+++G+++                      + QL    ++  +L+EL  KG GLG+GI L IATN+      ++   P T+  G G + F+G
Sbjct:    3 GVRFLDLVKPFTPFLPEVQAPERKVPFNQKIMWTAVTLMIFLVMSEIPLYGINSSDKSDALYWLRMMLASNRGSLMELGITPIVSSGMVFQLLGGTQLIEVNMDLKSDRELYQTAQKLFAIILSLGQATVYVLTGMYGPPKDLGVGVCLLLIFQLVLAALVVILLDELLQKGYGLGSGISLFIATNICEQIFWKAFA-PTTVNKGRGYE-FEG 213          
BLAST of EY679352 vs. ExPASy Swiss-Prot
Match: SC61A_DEBHA (Protein transport protein SEC61 subunit alpha OS=Debaryomyces hansenii GN=SEC61 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.948e-42
Identity = 95/213 (44.60%), Postives = 142/213 (66.67%), Query Frame = 3
Query:  165 GFRVLHLVRPFLAFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIIIAIGESSCLCSLRNVW*C*PTWSREWPSYLVQLCYGGIMGSVLNELPSKGKGLGTGIPLIIATNVWGNFLGESLLFPPTITMGTGKQNFKG 803
            GFRVL LV+PF  F+PEV + +RKV F++++++T ++L IFLV S++PLYGI S+ G+DP YW+R++LASNRGT+MELGI+PIV++G+V QLL G+K+I VD + + DR     AQKL  I++A+G+++               +      ++QL + GI+  +L+EL  KG GLG+GI L  ATNV      ++   P T  +G G + F+G
Sbjct:    3 GFRVLDLVKPFTPFMPEVIAPERKVAFQQRLMWTGVTLLIFLVMSEIPLYGIASSDGSDPLYWLRMMLASNRGTLMELGISPIVSAGMVFQLLQGTKLITVDMSNKNDRDQFQTAQKLFAILLAVGQATVYVLTGMYGPPSSLGTGVCLLLVLQLVFAGIVVILLDELLQKGYGLGSGISLFTATNVCEQVFWKAFA-PTTSNIGKGTE-FEG 213          
BLAST of EY679352 vs. ExPASy Swiss-Prot
Match: SC61A_CANAL (Protein transport protein SEC61 subunit alpha OS=Candida albicans GN=SEC61 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.463e-41
Identity = 96/221 (43.44%), Postives = 138/221 (62.44%), Query Frame = 3
Query:  165 GFRVLHLVRPFLAFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIIIAIGESSCLC--------SLRNVW*C*PTWSREWPSYLVQLCYGGIMGSVLNELPSKGKGLGTGIPLIIATNVWGNFLGESLLFPPTITMGTGKQNFKG 803
            GFRVL LV+PF  FLPEV + +RKV F+++V++T+I+L IFLV S++PLYGI S+  +DP +W+R++LASNRGT+MELGI+PIV+SG++ QLL G+KII VD   + DR     AQKLL I++A+G+++           S   V  C           ++QL +   +  +L+EL  KG GLG+G+ L  ATN       ++  F PT +       F G
Sbjct:    3 GFRVLDLVKPFSPFLPEVIAPERKVQFQQRVMWTIITLLIFLVMSEIPLYGIASSDSSDPLFWLRMMLASNRGTLMELGISPIVSSGMLFQLLQGTKIIHVDMQNKNDRETFQTAQKLLAILLAVGQATVYVLTGMYGPPSSLGVGVC--------SLLILQLVFASTIVILLDELLQKGYGLGSGVSLFTATNTCEQVFWKA--FAPTTSTSAKGTEFDG 213          
BLAST of EY679352 vs. ExPASy Swiss-Prot
Match: SC61A_NEUCR (Protein transport protein SEC61 subunit alpha OS=Neurospora crassa GN=sec-61 PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.260e-41
Identity = 94/216 (43.52%), Postives = 141/216 (65.28%), Query Frame = 3
Query:  171 RVLHLVRPFLAFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIIIAIGESSCLCSLRNVW*C*PTWSREWPS---------YLVQLCYGGIMGSVLNELPSKGKGLGTGIPLIIATNVWGNFLGESLLFPPTITMGTGKQ 791
            R L LV+PF+ FLPEVQ  + K+PF +K+++T ++L IFLV SQ+PLYGI S+  +DP YW+R+++ASNRGT+MELGITPI++SG+V QLLAG+ +I+V+ +++ DR L   AQKL  +I++IG ++             T     PS          ++QL   G++  +L+EL  KG GLG+GI L IATN+  + + ++   P +I  G G +
Sbjct:    5 RFLDLVKPFVPFLPEVQQPETKIPFNQKLMWTGLTLLIFLVMSQMPLYGIVSSDTSDPLYWLRMMMASNRGTLMELGITPIISSGMVFQLLAGTHMIDVNLDLKADRELYQTAQKLFAVILSIGTATVYVF---------TGLYGPPSDLGAGIVFLLILQLVVAGMIVILLDELLQKGYGLGSGISLFIATNICESIMWKA-FSPTSINTGRGPE 210          
BLAST of EY679352 vs. ExPASy Swiss-Prot
Match: SC61A_CANGA (Protein transport protein SEC61 subunit alpha OS=Candida glabrata GN=SEC61 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.618e-40
Identity = 92/216 (42.59%), Postives = 136/216 (62.96%), Query Frame = 3
Query:  171 RVLHLVRPFLAFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIIIAIGESSCLCSLRNVW*C*PTWSREWPSYLVQLCYGGIMGSVLNELPSKGKGLGTGIPLIIATNVWGNFLGESLLFPPTITMGTGKQNFKGWNLLF 818
            R+L L +PF AFLPEV S +RKVP+ +K+I+T +SL IFLV  Q+PLYGI S   +DP YW+R +LASNRGT+MELG++PI+TS ++ Q L G+++++V  + +EDR L   AQK+  II+  G++  +    N               + QL +   +  +L+EL +KG GLG+GI L  ATN+  N   ++   P T+  G GK+ F+G  + F
Sbjct:    4 RILSLFKPFEAFLPEVISPERKVPYNQKLIWTGVSLLIFLVLGQIPLYGIVSAETSDPLYWLRAMLASNRGTLMELGVSPIITSSMIFQFLQGTQLLQVSLDSKEDRELYQIAQKVCAIILTFGQALVVVMTGNYGSPSDLGIAISLLLIFQLMFASFIVLLLDELLTKGYGLGSGISLFTATNIAENIFWKAFA-PTTVNSGRGKE-FEGAVIAF 217          
The following BLAST results are available for this feature:
BLAST of EY679352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
S61A1_PONAB5.547e-4951.13Protein transport protein Sec61 subunit alpha isof... [more]
S61A1_MOUSE5.547e-4951.13Protein transport protein Sec61 subunit alpha isof... [more]
S61A1_HUMAN5.547e-4951.13Protein transport protein Sec61 subunit alpha isof... [more]
S61A1_CANFA5.547e-4951.13Protein transport protein Sec61 subunit alpha isof... [more]
S61A2_DANRE1.236e-4850.24Protein transport protein Sec61 subunit alpha-like... [more]
SC61A_YARLI2.948e-4244.13Protein transport protein SEC61 subunit alpha OS=Y... [more]
SC61A_DEBHA2.948e-4244.60Protein transport protein SEC61 subunit alpha OS=D... [more]
SC61A_CANAL1.463e-4143.44Protein transport protein SEC61 subunit alpha OS=C... [more]
SC61A_NEUCR3.260e-4143.52Protein transport protein SEC61 subunit alpha OS=N... [more]
SC61A_CANGA1.618e-4042.59Protein transport protein SEC61 subunit alpha OS=C... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-059-C03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679352 ID=EY679352; Name=EY679352; organism=Citrus sinensis; type=EST; length=932bp
TGGTGGGTGTTGGGGCGGCGGTCGGGTCGGGATTCCCGGGTCGACCCCGC
GTCCGCGTTTTAGCAGAATTCAGATTCATTTAACGTAACGTTTCTCTACG
GTTCTCCGATCCGCGAGTTCGTACGATTAGGTTGGTCTAGTTGGGACTGA
ATAAGATGGGAGGTGGATTCAGAGTGCTCCATCTTGTCCGGCCTTTTCTT
GCATTCCTTCCTGAGGTTCAGAGCGCTGACAGGAAGGTTCCTTTCAGAGA
GAAGGTTATCTACACTGTGATCTCTCTCTTCATATTCTTGGTGTGCAGTC
AGCTCCCGCTGTATGGCATACACTCGACAACTGGTGCGGATCCATTCTAT
TGGATGCGTGTTATTCTTGCTTCGAACCGTGGGACTGTGATGGAGCTTGG
TATCACCCCAATTGTGACATCTGGATTGGTGATGCAACTACTTGCCGGGT
CAAAGATCATTGAAGTGGACAATAATGTTCGCGAAGATCGTGCCCTATTA
AATGGTGCACAGAAGTTGCTGGGCATCATCATAGCTATTGGTGAAAGCAG
TTGCCTATGTTCTCTCAGGAATGTATGGTAGTGTTAACCAACTTGGAGTA
GGGAATGGCCTTCCTATCTTGTTCAGCTCTGCTATGGTGGAATAATGGGA
TCTGTTTTAAATGAACTCCCTTCAAAAGGTAAGGGCCTGGGAACCGGGAT
CCCCCTAATCATTGCAACCAATGTTTGGGGAAACTTCCTCGGGGAAAGCC
TTTTATTCCCCCCCACTATTACAATGGGAACGGGGAAGCAAAATTTTAAG
GGCTGGAATTTGCTTTTTTCCCCCTTTTGAATACATCCAATGAGGCAATT
TTCGGGGCCTTGTGGGAAAACTTTTATTCCGGAAGATAAAGCCCTAAAGG
TAGGAAGACCCATGTTGGGTCCACAGGCATGG
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