EY679331
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679331 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 3.405e-65 Identity = 130/183 (71.04%), Postives = 144/183 (78.69%), Query Frame = 2 Query: 122 RISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMEPVEG*QNCWKGRSVK*TDPL*PGGNF*SIGFGWKNREAFAELKVK 670 R +MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FPELL +NGVKFGEAVWFKAG+QIF+EGGLDYLGNP+LIHAQSILAIWA QVVLM VEG G + DPL PGG F +G + ++FAELKVK Sbjct: 34 RFTMRRTVKSAPES--IWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEG-YRVGGGPLGEGLDPLYPGGAFDPLGLA-DDPDSFAELKVK 212
BLAST of EY679331 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 4.762e-59 Identity = 130/201 (64.68%), Postives = 145/201 (72.14%), Query Frame = 2 Query: 68 VGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMEPVEG*QNCWKGRSVK*TDPL*PGGNF*SIGFGWKNREAFAELKVK 670 + K L P + L +M K +KS S S RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSA PETFAKNRELEVIH R AM ALGC+FPELL+ G FGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIW +V+LM VEG +G + TDPL P G+F S+G ++ EAFAELKVK Sbjct: 20 IAKPSKLNPISSTLIVTAGFTMLKHAAKSKVSSSTCDR--RVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEG-YRIARGPLGEVTDPLYP-GSFDSLGLA-EDTEAFAELKVK 215
BLAST of EY679331 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.694e-56 Identity = 127/223 (56.95%), Postives = 155/223 (69.51%), Query Frame = 2 Query: 134 RKTGSKSV---SSGSPWYGLDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMEPVEG*QNCWKGRSVK*TDPL*PGGNF*SIGFGWKNREAFAELKVK--GNPRMEGWLWFSQVWLPPSGPLVPGKGTVRRTWANHLA 784 +KT +K+ SSG +YG +R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RWAMLGALGC PELLA++G KFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQ+I+A A QV+LM +EG G + + DPL PG +F +G + + FAELKVK N R+ + F +V GKG V+ +HLA Sbjct: 20 KKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEG-YRVNGGPAGEGLDPLYPGESFDPLGLA-DDPDTFAELKVKEIKNGRLASFSMFGFF----VQAIVTGKGPVQNL-DDHLA 235
BLAST of EY679331 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.873e-55 Identity = 125/212 (58.96%), Postives = 148/212 (69.81%), Query Frame = 2 Query: 158 SSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMEPVEG*QNCWKGRSVK*TDPL*PGGNF*SIGFGWKNREAFAELKVK--GNPRMEGWLWFSQVWLPPSGPLVPGKGTVRRTWANHLA 784 S+G WYG DR K+LGPFS P+YLTGEFPGDYGWDTAGLSADPETF K RELEVIH RWA+LGALG + PELL+ GVKFGE VWFKAGAQIFSEGGLDYLG+P+LIHAQ+I+A A QVVLM +EG G + + DPL PG +F +G + + FAELKVK N R+ + F +V GKG ++ A+HLA Sbjct: 34 SAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEG-YRVNGGPAGEGLDPLYPGESFDPLGLA-DDPDTFAELKVKEIKNGRLAMFSCFGFF----VQAIVTGKGPIQNL-ADHLA 238
BLAST of EY679331 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.342e-53 Identity = 122/204 (59.80%), Postives = 142/204 (69.61%), Query Frame = 2 Query: 71 GKAVNLAPSGN-ELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMEPVEG*Q-NCWKGRSVK*TDPL*PGGN-F*SIGFGWKNREAFAELKVK 670 G+A + +P + + GRI+M WYG DRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCVFPE+L + GV+F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QV+LM VEG + N G V + L PGG F +G + FAELKVK Sbjct: 24 GRAASASPLRDIAAATNGRITM---------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDG--VGEGNDLYPGGQYFDPLGLA-DDPVTFAELKVK 215
BLAST of EY679331 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.905e-53 Identity = 120/205 (58.54%), Postives = 140/205 (68.29%), Query Frame = 2 Query: 65 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMEPVEG*Q-NCWKGRSVK*TDPL*PGGN-F*SIGFGWKNREAFAELKVK 670 F+G+ N P + ++ G ++ S WYG DRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+L + V F E VWFKAG+QIFS+GGLDYLGNP+L+HAQSILA+ QVVLM VEG + N G V + L PGG F +G + FAELKVK Sbjct: 19 FLGQTKNANPLRDVVAMGS--------ARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPG--VGEGNDLYPGGQYFDPLGLA-DDPTTFAELKVK 212
BLAST of EY679331 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.300e-48 Identity = 117/211 (55.45%), Postives = 141/211 (66.82%), Query Frame = 2 Query: 173 WYGLDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMEPVEG*Q-NCWKGRSVK*TDPL*PGGNF*SIGFGWKNREAFAELKVK----GNPRMEGWLWFSQVWLPPSGPLVPGKGTVRRTWANHLA 784 +YG DR K+LGPFS + P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+LGALG + PELL++ GV+FGE VWFKAGAQIF++GGL+YLGN SLIHAQSI+A A QVVLM E + N + D L PGG F +G + + FAELKVK G M L F +V GKG V+ +HLA Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLA-DDPDTFAELKVKEIKNGRLAMFSCLGFF------VQAIVTGKGPVQNL-TDHLA 235
BLAST of EY679331 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.818e-42 Identity = 103/180 (57.22%), Postives = 122/180 (67.78%), Query Frame = 2 Query: 137 KTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGE-AVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMEPVEG*QNCWKGRSVK*TDPL*PGGNF*SIGFGWKNREAFAELKVK 670 K SKS SS + +YG D + P TGEFPGDYGWDTAGLSADPETF + RELE+IH R +LGALG V PELLA +G+KFG+ A+WFKAGA IF +GGL+YLGNPSLIHAQ+I+A A QVVLM VEG G + + DPL PG F +G + + FAELKVK Sbjct: 45 KAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEG-YRVNGGPAGEGLDPLYPGEAFDPLGLA-DDPDTFAELKVK 221
BLAST of EY679331 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 6.277e-27 Identity = 78/139 (56.12%), Postives = 90/139 (64.75%), Query Frame = 2 Query: 374 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMEPVEG*QNCWKGRSVK*TDPL*PGGNF*SIGFGWKNREAFAELKVK--GNPRMEGWLWFSQVWLPPSGPLVPGKGTVRRTWANHLA 784 ELL +NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWACQVVLM +EG G + DPL PG F +G + EA AELKVK N R+ + F +V GKG + + +HLA Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEG-YRVGGGPLGEGLDPLYPGDAFDPLGLA-DDPEAKAELKVKEIKNGRLAMFSMFGFF----VQAIVTGKGPIENLY-DHLA 132
BLAST of EY679331 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.729e-22 Identity = 86/210 (40.95%), Postives = 106/210 (50.48%), Query Frame = 2 Query: 146 SKSVSSGSP----WYGLDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMEPVEG*QNCWKGRSVK*TDPL*PGGNF*SIGFGWKNREAFAELKVK----GNPRMEGWL-WFSQVWLPPSGPL 736 SK+VS S WYG DR +L E P YL GE GDYG+D GL PE FAK + E+IH RWAMLGA G + PE L + G G EAVWFK GA + L+Y G I +LA+ A +VVL+ E G + D L PGG F +G K+ E A LKVK G M L +F Q ++ GP+ Sbjct: 49 SKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVA-EVVLLGGAEY-YRITNGLDFE--DKLHPGGPFDPLGLA-KDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPV 251 The following BLAST results are available for this feature:
BLAST of EY679331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679331 ID=EY679331; Name=EY679331; organism=Citrus sinensis; type=EST; length=963bpback to top |