EY679326

Overview
NameEY679326
Unique NameEY679326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length947
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: MLE_AEQIR (Myosin essential light chain, striated adductor muscle OS=Aequipecten irradians PE=1 SV=2)

HSP 1 Score: 60.077 bits (144), Expect = 7.206e-11
Identity = 41/113 (36.28%), Postives = 60/113 (53.10%), Query Frame = 3
Query:   54 QLTDDQISEFKEAFSLFDK-DG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMK-DTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            +L+ D+I + K+ F LFD  DG DG +   +LG V R LG NP   ++   +      G  ++ F EFL      M  +  +  +  EAF+ FD++  GF S AELR V+T L
Sbjct:    3 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVF-AVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTAL 114          

HSP 2 Score: 28.4906 bits (62), Expect = 7.206e-11
Identity = 14/31 (45.16%), Postives = 22/31 (70.97%), Query Frame = 1
Query:  382 LGEKLTDEEVNEMIREADVNGDWPDKLRGNL 474
            LGE+L+DE+V+E+I+  D+  D    L GN+
Sbjct:  114 LGERLSDEDVDEIIKLTDLQED----LEGNV 140          
BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: MLRV_RABIT (Myosin regulatory light chain 2, ventricular/cardiac muscle isoform OS=Oryctolagus cuniculus GN=MYL2 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 8.034e-11
Identity = 39/104 (37.50%), Postives = 57/104 (54.81%), Query Frame = 3
Query:   69 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMT 377
            QI EFKEAF++ D++ DG I   +L     +LG+ N    E+ +MI E      G I+F  FL +   K+K  D EE +  AF+VFD +  G   A  +R ++T
Sbjct:   25 QIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVNVKNEEIDEMIKEAP----GPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYVREMLT 124          
BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: MLRV_HUMAN (Myosin regulatory light chain 2, ventricular/cardiac muscle isoform OS=Homo sapiens GN=MYL2 PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 8.034e-11
Identity = 39/104 (37.50%), Postives = 57/104 (54.81%), Query Frame = 3
Query:   69 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMT 377
            QI EFKEAF++ D++ DG I   +L     +LG+ N    E+ +MI E      G I+F  FL +   K+K  D EE +  AF+VFD +  G   A  +R ++T
Sbjct:   25 QIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVNVKNEEIDEMIKEAP----GPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYVREMLT 124          
BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: MLRA_CHICK (Myosin regulatory light chain 2A, cardiac muscle isoform OS=Gallus gallus PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 8.034e-11
Identity = 40/104 (38.46%), Postives = 57/104 (54.81%), Query Frame = 3
Query:   69 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMT 377
            QI EFKEAF++ D++ DG I   +L     +LG+ N    E+ +MI E      G I+F  FL +   K+K  D EE +  AF+VFD +  G  SA    ++MT
Sbjct:   25 QIQEFKEAFTIMDQNRDGFIDKADLRDTFAALGRLNVKNEEIDEMIKEAP----GPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGLKSAYIKEMLMT 124          
BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: EFCB2_HUMAN (EF-hand calcium-binding domain-containing protein 2 OS=Homo sapiens GN=EFCAB2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.034e-11
Identity = 41/109 (37.61%), Postives = 60/109 (55.05%), Query Frame = 3
Query:   78 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGTIDFPEFLNLMARKMKDTD----SEEELKEAFRVFDKDQNGFFSAAELRLVMTNLRG 389
            + KEAF +FD + +  +  +E+GT++RSLG  PTE EL D+I EV + +  G I F +FL +M   + +       E+ L  AF V D  + GF +  EL   MT   G
Sbjct:  154 KIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEDG 262          
The following BLAST results are available for this feature:
BLAST of EY679326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
MLE_AEQIR7.206e-1136.28Myosin essential light chain, striated adductor mu... [more]
MLRV_RABIT8.034e-1137.50Myosin regulatory light chain 2, ventricular/cardi... [more]
MLRV_HUMAN8.034e-1137.50Myosin regulatory light chain 2, ventricular/cardi... [more]
MLRA_CHICK8.034e-1138.46Myosin regulatory light chain 2A, cardiac muscle i... [more]
EFCB2_HUMAN8.034e-1137.61EF-hand calcium-binding domain-containing protein ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-059-A01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679326 ID=EY679326; Name=EY679326; organism=Citrus sinensis; type=EST; length=947bp
GAAAAAAAAAAACCTAGTTTTCAGTTGAAAAAAAAAAGAAGAAAATGGCG
GATCAGCTCACCGACGATCAGATCTCCGAGTTCAAAGAAGCCTTCAGCTT
GTTCGACAAGGACGGCGACGGTTGCATTACCACCAAGGAGCTTGGTACTG
TTATGAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATG
ATCAATGAAGTGGATGCTGATGGTAATGGAACTATTGATTTTCCTGAATT
CCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGC
TGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCTTCTCA
GCTGCTGAGCTGCGCCTTGTGATGACAAACCTTAGGGGAGAAGCTTACTG
ATGAGGAAGTCAATGAGATGATAAGGGAAGCTGATGTCAATGGTGATTGG
CCAGATAAATTACGAGGGAATTTGTCGAGGTTATGATGGCTAAGTAAGTG
ACTCCACCAAACAAAAACTTCCTGGGAAAAGAAAAAAATTGTTGATTAAA
AATAATTGGGTCCCTAAATTCATTTTTTTAAAAATTTTATTTTAAAAATT
CTGGAAGGACTTGTTAATGGAACCAGGTGGTCCCCTGCTTACAATATGGC
TTGGGGGCTAGGAACACTTTTTCAGATTTCTAAAGGTTTAAGTTTTTTTC
CGCCTCCTCTGGGAAACTTTGCTTCGGGTTAAAGAGTGGTATCCAAGAAA
GCGGCCCAAATAATGAATACAAATGATATTTTATTGTACATATAAACCGA
GAGAGATTATAGTATAAAATTTTAGTTGAGATATTTGTAAAGATGATTAT
GATAATAATAAAAAAAAAATAATATAGATCAGTATAATAGATGAAAATTC
GAATATGGGTTGTTGCTTTTTTTAATAAAAAGGTTCACATATGTGCA
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