EY679326 | Citrus Genome Database

Overview


Name	EY679326
Unique Name	EY679326
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	947

Libraries


Library Name	Type
Sweet orange leaf, infected with CiLV	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM_PFIPI (Calmodulin OS=Pfiesteria piscicida PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 9.282e-58
Identity = 101/113 (89.38%), Postives = 108/113 (95.58%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGF SAAELR VMTNL
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNL 113

HSP 2 Score: 43.5134 bits (101), Expect = 9.282e-58
Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTDEEV+EMIREADV+GD
Sbjct:  113 LGEKLTDEEVDEMIREADVDGD 134

[Close]

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM_KARMI (Calmodulin OS=Karlodinium micrum PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 9.282e-58
Identity = 101/113 (89.38%), Postives = 108/113 (95.58%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGF SAAELR VMTNL
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNL 113

HSP 2 Score: 43.5134 bits (101), Expect = 9.282e-58
Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTDEEV+EMIREADV+GD
Sbjct:  113 LGEKLTDEEVDEMIREADVDGD 134

[Close]

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM_ALEFU (Calmodulin OS=Alexandrium fundyense PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 9.282e-58
Identity = 101/113 (89.38%), Postives = 108/113 (95.58%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGF SAAELR VMTNL
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNL 113

HSP 2 Score: 43.5134 bits (101), Expect = 9.282e-58
Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTDEEV+EMIREADV+GD
Sbjct:  113 LGEKLTDEEVDEMIREADVDGD 134

[Close]

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM_MACPY (Calmodulin OS=Macrocystis pyrifera PE=2 SV=3)

HSP 1 Score: 202.601 bits (514), Expect = 1.210e-57
Identity = 100/113 (88.50%), Postives = 107/113 (94.69%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+VFDKD NGF SAAELR +MTNL
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIIEAFKVFDKDGNGFISAAELRHIMTNL 113

HSP 2 Score: 43.1282 bits (100), Expect = 1.210e-57
Identity = 19/22 (86.36%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTDEEV+EMIREAD++GD
Sbjct:  113 LGEKLTDEEVDEMIREADIDGD 134

[Close]

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM_RENRE (Calmodulin OS=Renilla reniformis PE=1 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 1.578e-57
Identity = 100/113 (88.50%), Postives = 108/113 (95.58%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD +GF SAAELR VMTNL
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNL 113

HSP 2 Score: 43.1282 bits (100), Expect = 1.578e-57
Identity = 19/22 (86.36%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTDEEV+EMIREAD++GD
Sbjct:  113 LGEKLTDEEVDEMIREADIDGD 134

HSP 3 Score: 71.633 bits (174), Expect = 7.266e-12
Identity = 35/77 (45.45%), Postives = 51/77 (66.23%), Query Frame = 3

Query:   45 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 272
            MA ++ D D   E +EAF +FDKDGDG I+  EL  VM +LG+  T+ E+ +MI E D DG+G +++ EF+ +M  K
Sbjct:   73 MARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149

[Close]

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM_PATSP (Calmodulin OS=Patinopecten sp. PE=1 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 1.578e-57
Identity = 100/113 (88.50%), Postives = 108/113 (95.58%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD +GF SAAELR VMTNL
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNL 113

HSP 2 Score: 43.1282 bits (100), Expect = 1.578e-57
Identity = 19/22 (86.36%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTDEEV+EMIREAD++GD
Sbjct:  113 LGEKLTDEEVDEMIREADIDGD 134

HSP 3 Score: 71.633 bits (174), Expect = 7.266e-12
Identity = 35/77 (45.45%), Postives = 51/77 (66.23%), Query Frame = 3

Query:   45 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 272
            MA ++ D D   E +EAF +FDKDGDG I+  EL  VM +LG+  T+ E+ +MI E D DG+G +++ EF+ +M  K
Sbjct:   73 MARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149

[Close]

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM_PLEOS (Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=3)

HSP 1 Score: 203.371 bits (516), Expect = 2.057e-57
Identity = 100/113 (88.50%), Postives = 108/113 (95.58%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQL+++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKM+DTDSEEE+KEAF+VFDKD NG+ SAAELR VMTNL
Sbjct:    1 MADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNL 113

HSP 2 Score: 41.5874 bits (96), Expect = 2.057e-57
Identity = 19/22 (86.36%), Postives = 21/22 (95.45%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTD EV+EMIREADV+GD
Sbjct:  113 LGEKLTDNEVDEMIREADVDGD 134

HSP 3 Score: 71.2478 bits (173), Expect = 9.490e-12
Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 3

Query:   45 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 272
            MA ++ D D   E KEAF +FDKDG+G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:   73 MARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDNEVDEMIREADVDGDGQINYEEFVKMMLSK 149

[Close]

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM_SUBDO (Calmodulin OS=Suberites domuncula PE=2 SV=3)

HSP 1 Score: 202.986 bits (515), Expect = 2.057e-57
Identity = 100/113 (88.50%), Postives = 107/113 (94.69%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVD DGNGTIDFPEFL +MARKMK+TDSEEE++EAFRVFDKD NGF SAAELR VMTNL
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDTDGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL 113

HSP 2 Score: 41.9726 bits (97), Expect = 2.057e-57
Identity = 19/22 (86.36%), Postives = 21/22 (95.45%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTDEEV+EMIREAD +GD
Sbjct:  113 LGEKLTDEEVDEMIREADTDGD 134

HSP 3 Score: 68.9366 bits (167), Expect = 4.710e-11
Identity = 31/69 (44.93%), Postives = 46/69 (66.67%), Query Frame = 3

Query:   66 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 272
            D   E +EAF +FDKDG+G I+  EL  VM +LG+  T+ E+ +MI E D DG+G +++ EF+ +M  K
Sbjct:   81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADTDGDGQVNYEEFVGMMTSK 149

[Close]

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM_HETTR (Calmodulin OS=Heterocapsa triquetra PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.057e-57
Identity = 100/113 (88.50%), Postives = 108/113 (95.58%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVD+DGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGF SAAELR VMTNL
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDSDGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNL 113

HSP 2 Score: 43.5134 bits (101), Expect = 2.057e-57
Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTDEEV+EMIREADV+GD
Sbjct:  113 LGEKLTDEEVDEMIREADVDGD 134

[Close]

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM_PLECO (Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 2.682e-57
Identity = 100/113 (88.50%), Postives = 108/113 (95.58%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQL+++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKM+DTDSEEE+KEAF+VFDKD NG+ SAAELR VMTNL
Sbjct:    1 MADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNL 113

HSP 2 Score: 41.2022 bits (95), Expect = 2.682e-57
Identity = 18/22 (81.82%), Postives = 21/22 (95.45%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTD EV+EMIREAD++GD
Sbjct:  113 LGEKLTDNEVDEMIREADIDGD 134

HSP 3 Score: 70.8626 bits (172), Expect = 1.239e-11
Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 3

Query:   45 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 272
            MA ++ D D   E KEAF +FDKDG+G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:   73 MARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDNEVDEMIREADIDGDGQINYEEFVKMMLSK 149

The following BLAST results are available for this feature:

BLAST of EY679326 vs. ExPASy Swiss-Prot

BLAST of EY679326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375


Match Name	E-value	Identity	Description
CALM_PFIPI	9.282e-58	89.38	Calmodulin OS=Pfiesteria piscicida PE=2 SV=1	[more]
CALM_KARMI	9.282e-58	89.38	Calmodulin OS=Karlodinium micrum PE=2 SV=1	[more]
CALM_ALEFU	9.282e-58	89.38	Calmodulin OS=Alexandrium fundyense PE=2 SV=1	[more]
CALM_MACPY	1.210e-57	88.50	Calmodulin OS=Macrocystis pyrifera PE=2 SV=3	[more]
CALM_RENRE	1.578e-57	88.50	Calmodulin OS=Renilla reniformis PE=1 SV=2	[more]
CALM_PATSP	1.578e-57	88.50	Calmodulin OS=Patinopecten sp. PE=1 SV=2	[more]
CALM_PLEOS	2.057e-57	88.50	Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=...	[more]
CALM_SUBDO	2.057e-57	88.50	Calmodulin OS=Suberites domuncula PE=2 SV=3	[more]
CALM_HETTR	2.057e-57	88.50	Calmodulin OS=Heterocapsa triquetra PE=2 SV=1	[more]
CALM_PLECO	2.682e-57	88.50	Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 S...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-401-059-A01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY679326 ID=EY679326; Name=EY679326; organism=Citrus sinensis; type=EST; length=947bp
GAAAAAAAAAAACCTAGTTTTCAGTTGAAAAAAAAAAGAAGAAAATGGCG
GATCAGCTCACCGACGATCAGATCTCCGAGTTCAAAGAAGCCTTCAGCTT
GTTCGACAAGGACGGCGACGGTTGCATTACCACCAAGGAGCTTGGTACTG
TTATGAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATG
ATCAATGAAGTGGATGCTGATGGTAATGGAACTATTGATTTTCCTGAATT
CCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGC
TGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCTTCTCA
GCTGCTGAGCTGCGCCTTGTGATGACAAACCTTAGGGGAGAAGCTTACTG
ATGAGGAAGTCAATGAGATGATAAGGGAAGCTGATGTCAATGGTGATTGG
CCAGATAAATTACGAGGGAATTTGTCGAGGTTATGATGGCTAAGTAAGTG
ACTCCACCAAACAAAAACTTCCTGGGAAAAGAAAAAAATTGTTGATTAAA
AATAATTGGGTCCCTAAATTCATTTTTTTAAAAATTTTATTTTAAAAATT
CTGGAAGGACTTGTTAATGGAACCAGGTGGTCCCCTGCTTACAATATGGC
TTGGGGGCTAGGAACACTTTTTCAGATTTCTAAAGGTTTAAGTTTTTTTC
CGCCTCCTCTGGGAAACTTTGCTTCGGGTTAAAGAGTGGTATCCAAGAAA
GCGGCCCAAATAATGAATACAAATGATATTTTATTGTACATATAAACCGA
GAGAGATTATAGTATAAAATTTTAGTTGAGATATTTGTAAAGATGATTAT
GATAATAATAAAAAAAAAATAATATAGATCAGTATAATAGATGAAAATTC
GAATATGGGTTGTTGCTTTTTTTAATAAAAAGGTTCACATATGTGCA