EY679290

Overview
NameEY679290
Unique NameEY679290
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPP_BUXMI (ATP-dependent Clp protease proteolytic subunit OS=Buxus microphylla GN=clpP PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.808e-26
Identity = 58/139 (41.73%), Postives = 82/139 (58.99%), Query Frame = 3
Query:  318 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLPRLGELRGQGNE 734
            MPIG PKV +R PGE    WVD++N L+RER++F+GQ +D E SNQ++  M+YL   DD+K +YL+ N PGG V P +AIYDTMQ +   + T  +G    +  FLL       R   P +++++  P       Q  E
Sbjct:    1 MPIGVPKVPFRNPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGIAIYDTMQFVPPDIHTICMGLAASMGSFLLVGGEITKRLAFPHARVMIHQPASSFYEAQTGE 139          
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPP_SOLLC (ATP-dependent Clp protease proteolytic subunit OS=Solanum lycopersicum GN=clpP PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.974e-26
Identity = 57/139 (41.01%), Postives = 84/139 (60.43%), Query Frame = 3
Query:  318 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLPRLGELRGQGNE 734
            MPIG P+V++R PG+    WVD++N LYRER++F+GQ I  E SNQ++  MLYL   D++K +YL+ N PGG V P +AIYDTMQ ++  + T  +G    +  F+L       R   P +++++  P  G    Q  E
Sbjct:    1 MPIGVPRVVFRNPGDPISSWVDIYNRLYRERLLFLGQGIGTELSNQLIGLMLYLSMEDENKDLYLFVNSPGGWVIPGIAIYDTMQFVRPDIHTICLGLAASMGSFILAGGQLTKRIAFPHARVMIHEPYSGFYMAQVGE 139          
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPP_ADICA (ATP-dependent Clp protease proteolytic subunit OS=Adiantum capillus-veneris GN=clpP PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 4.974e-26
Identity = 56/139 (40.29%), Postives = 84/139 (60.43%), Query Frame = 3
Query:  318 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLPRLGELRGQGNE 734
            MPIG PKV +R PGE    WVD++N LYRER++F+GQ +D+E +NQ++  M+YL+S D +K +YLY N PGG V   +++YD MQ +   V T  +G    +  F+L       R  +P +++++  P      GQ  E
Sbjct:    1 MPIGVPKVPFRLPGEEDAVWVDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNSEDQAKDMYLYVNSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILAGGEITRRIALPHARVMIHQPASSYYDGQAGE 139          
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPP_VITVI (ATP-dependent Clp protease proteolytic subunit OS=Vitis vinifera GN=clpP PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.496e-26
Identity = 55/139 (39.57%), Postives = 81/139 (58.27%), Query Frame = 3
Query:  318 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLPRLGELRGQGNE 734
            MPIG PKV +R PGE    W+D++N LYRER++F+GQ ++ E SNQ++  M+YL   D++K +Y + N PGG V P +AIYDTMQ +   V T  +G    +  F+L       R   P +++++  P       Q  E
Sbjct:    1 MPIGVPKVPFRNPGEDDISWIDVYNRLYRERLLFLGQEVESEISNQLIGLMIYLSIEDENKDLYFFINSPGGWVLPGIAIYDTMQFVPPEVHTICLGLAASMGSFILVGGTITKRLAFPHARVMIHQPAAAFYEAQAGE 139          
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPP_PSEAK (ATP-dependent Clp protease proteolytic subunit OS=Pseudendoclonium akinetum GN=clpP PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.496e-26
Identity = 60/140 (42.86%), Postives = 87/140 (62.14%), Query Frame = 3
Query:  318 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLPRLGELRGQGNEI 737
            MPIG PKV YR  G    +WVDL+N LYRERV+F+ Q++D+E +NQ++  MLYL++ D SK IY+Y N PGG VT  + ++D M  +K+ V T  VG    +  F+L       R  +P S+I++  P  G  +GQ + +
Sbjct:    1 MPIGVPKVPYRLAGNEVAEWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEDKSKGIYVYINSPGGSVTCGVGVFDAMNYIKSDVTTICVGTAASMASFVLAGGRKGKRLALPHSRIMIHQPE-GGSQGQASVV 139          
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPP_CALFG (ATP-dependent Clp protease proteolytic subunit OS=Calycanthus floridus var. glaucus GN=clpP PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.496e-26
Identity = 56/128 (43.75%), Postives = 81/128 (63.28%), Query Frame = 3
Query:  318 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLP 701
            MPIG PKV +R+PGE    WVD++N L+RER++F+GQ +D E SNQ++  M+YL   DD+K +YL+ N PGG V P +AIYDTMQ +   V T  +G    +  F+L       R   P +++++  P
Sbjct:    1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLTIEDDTKDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQP 128          
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPP_PSINU (ATP-dependent Clp protease proteolytic subunit OS=Psilotum nudum GN=clpP PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.484e-26
Identity = 54/139 (38.85%), Postives = 84/139 (60.43%), Query Frame = 3
Query:  318 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLPRLGELRGQGNE 734
            MPIG PKV +R PGE    WVD++N LYRER++F+GQ +D+E +NQ++  M+YL+  D+++ +Y Y N PGG V P +++YD MQ +   V T  +G    +  F+L       R  +P +++++  P      GQ  E
Sbjct:    1 MPIGVPKVPFRLPGEEDAGWVDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDENRDMYSYINSPGGAVLPGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPHARVMIHQPASSYYDGQAGE 139          
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPP_ILLOL (ATP-dependent Clp protease proteolytic subunit OS=Illicium oligandrum GN=clpP PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.484e-26
Identity = 58/139 (41.73%), Postives = 82/139 (58.99%), Query Frame = 3
Query:  318 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLPRLGELRGQGNE 734
            MPIG PKV +R PGE    WVD++N L+RER++F+GQ +D E SNQ++  M+YL   DD++ +YL+ N PGG V P +AIYDTMQ +   V T  +G    +  FLL       R   P +++++  P       Q  E
Sbjct:    1 MPIGVPKVPFRNPGEEGAVWVDVYNRLHRERLLFLGQGVDSEISNQLVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFLLAGGEITKRLAFPHARVMIHQPASSFYEAQTGE 139          
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPP_PLAOC (ATP-dependent Clp protease proteolytic subunit OS=Platanus occidentalis GN=clpP PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.108e-25
Identity = 57/139 (41.01%), Postives = 83/139 (59.71%), Query Frame = 3
Query:  318 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLPRLGELRGQGNE 734
            MPIG PKV +R+PGE    WVD++N L+RER++F+GQ +D E SNQ++  M+YL   DD++ +YL+ N PGG V P +AIYDTMQ +   V T  +G    +  F+L       R   P +++++  P       Q  E
Sbjct:    1 MPIGVPKVPFRSPGEEDAIWVDVYNRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQTGE 139          
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPP_PHAAO (ATP-dependent Clp protease proteolytic subunit OS=Phalaenopsis aphrodite subsp. formosana GN=clpP PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.447e-25
Identity = 56/128 (43.75%), Postives = 80/128 (62.50%), Query Frame = 3
Query:  318 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLP 701
            MPIG PKV +R PGE    WVD++N L+RER++F+GQ +D E SNQI+  M+YL   DD++ +YL+ N PGG V P +AIYDTMQ +   V T  +G    +  F+L       R   P +++++  P
Sbjct:    1 MPIGVPKVPFRNPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQIVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDTMQFVLPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQP 128          
The following BLAST results are available for this feature:
BLAST of EY679290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_BUXMI3.808e-2641.73ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SOLLC4.974e-2641.01ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ADICA4.974e-2640.29ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_VITVI6.496e-2639.57ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PSEAK6.496e-2642.86ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CALFG6.496e-2643.75ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PSINU8.484e-2638.85ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ILLOL8.484e-2641.73ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PLAOC1.108e-2541.01ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PHAAO1.447e-2543.75ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-058-E11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679290 ID=EY679290; Name=EY679290; organism=Citrus sinensis; type=EST; length=924bp
CACGCGTCCGGCTAAACATGTCCGTTTCGCTTAACGCAAACTTATATCAA
CCTTCTCTGAGCTGTAACCTCAAGCTTTTTTCTGGATTAAAGATTCAATC
ACCAAGTTTGTTCTTTTACTGTCCTTCTTTGTTCAATTTTATTCTCTCAC
TGAGCTTTCTCGGTTGTTGATTCCCCCCTTCCCCCCGGCGGAATGCTTTT
GTAGGTGTTTTTGGAACTGGGAAACCTAATTTGAGTGCTGAATTCTATGG
CAGAGTTCATAAGAGCCTCTACTCCGGCATTCGTAATGATAAACCAATAA
GGGGACGAATTGCAATGATGCCGATTGGGACACCAAAAGTGCTTTATAGG
ACGCCTGGTGAGGGATCTTGGCAATGGGTTGATCTATGGAATGCCCTATA
TCGAGAACGTGTTATTTTCATTGGGCAAAATATAGATGAAGAATTTAGCA
ACCAAATATTGGCAACGATGTTGTATCTAGACAGTGTTGATGATTCCAAA
AGGATTTATTTGTACTTCAATGGTCCCGGTGGGGATGTTACTCCCACCTT
GGCAATTTACGACACTATGCAAAGCTTGAAGAATCCTGTTGGCACTCACT
GGGTGGGCTTTTGCTATCATTTACCAGGTTTTCTTCTAAAAGGGGGAAAA
AAGGGAATCCGGTCGGAAATGCCTTTTTCAAAAATTGTTTTAAAACTCCC
CCGCTTGGGGGAACTCCGGGGTCAGGGTAATGAAATTTTCTAATGAAACA
AAAAGAATTTCTTAAAAACAAAAAAATTATTTTTAAAGGGGTTTTTTTAA
AAAAAAAAGGGTATCCCCTTTTTAAAAAAAAAAAAAAAAAGAAATAAAAA
AAGAAATAAAACCCTTTTTGTTTTCCCAAAAAAGGCTTTTGAAAAAAAGG
GGGGAAAAAAAAAAATCCTAAAAA
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