EY679281

Overview
NameEY679281
Unique NameEY679281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length992
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679281 vs. ExPASy Swiss-Prot
Match: G6PD_SYNE7 (Glucose-6-phosphate 1-dehydrogenase OS=Synechococcus elongatus (strain PCC 7942) GN=zwf PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 4.676e-19
Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 3
Query:   12 FDNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMQPL----LLKNVIVGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFAAAAL 287
            ++  G +RD++QNHL+Q+ +L AME P SL A+ IRNEKVKV+++ +      L  + + GQYK      +S PAY D+      S TPT+ A  L
Sbjct:  247 YETAGALRDMVQNHLMQLFSLTAMEPPNSLGADGIRNEKVKVVQATRLADIDDLSLSAVRGQYKAGWMNGRSVPAYRDEEGADPQSFTPTYVAMKL 342          

HSP 2 Score: 41.2022 bits (95), Expect = 4.676e-19
Identity = 17/39 (43.59%), Postives = 26/39 (66.67%), Query Frame = 1
Query:  292 LNNARWDGVPFLMKAGKALHTKRAEIRVQFKHVPGNLYK 408
            ++N RW GVPF ++ GK +  K  EI +QFK VP  +++
Sbjct:  344 VDNWRWQGVPFYLRTGKRMPKKVTEIAIQFKTVPHLMFQ 382          
BLAST of EY679281 vs. ExPASy Swiss-Prot
Match: G6PD_ECOLI (Glucose-6-phosphate 1-dehydrogenase OS=Escherichia coli (strain K12) GN=zwf PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.680e-19
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 3
Query:   12 FDNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMQPLLLKNV----IVGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFAA 278
            FD  G +RD++QNHLLQIL + AM  P  L A+ IR+EKVKVL+S++ +   NV    + GQY       K  P Y ++    K S T TF A
Sbjct:  226 FDKAGQMRDMIQNHLLQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDRSNVREKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVA 318          

HSP 2 Score: 41.9726 bits (97), Expect = 4.680e-19
Identity = 22/48 (45.83%), Postives = 29/48 (60.42%), Query Frame = 1
Query:  292 LNNARWDGVPFLMKAGKALHTKRAEIRVQFKHVPGNLYKRKFWN*LTQ 435
            ++N RW GVPF ++ GK L TK +E+ V FK    NL+K   W  L Q
Sbjct:  323 IDNWRWAGVPFYLRTGKRLPTKCSEVVVYFKTPELNLFKES-WQDLPQ 369          
BLAST of EY679281 vs. ExPASy Swiss-Prot
Match: G6PD_ECOL6 (Glucose-6-phosphate 1-dehydrogenase OS=Escherichia coli O6 GN=zwf PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.680e-19
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 3
Query:   12 FDNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMQPLLLKNV----IVGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFAA 278
            FD  G +RD++QNHLLQIL + AM  P  L A+ IR+EKVKVL+S++ +   NV    + GQY       K  P Y ++    K S T TF A
Sbjct:  226 FDKAGQMRDMIQNHLLQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDRSNVREKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVA 318          

HSP 2 Score: 41.9726 bits (97), Expect = 4.680e-19
Identity = 22/48 (45.83%), Postives = 29/48 (60.42%), Query Frame = 1
Query:  292 LNNARWDGVPFLMKAGKALHTKRAEIRVQFKHVPGNLYKRKFWN*LTQ 435
            ++N RW GVPF ++ GK L TK +E+ V FK    NL+K   W  L Q
Sbjct:  323 IDNWRWAGVPFYLRTGKRLPTKCSEVVVYFKTPELNLFKES-WQDLPQ 369          
BLAST of EY679281 vs. ExPASy Swiss-Prot
Match: G6PD_ECO57 (Glucose-6-phosphate 1-dehydrogenase OS=Escherichia coli O157:H7 GN=zwf PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.680e-19
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 3
Query:   12 FDNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMQPLLLKNV----IVGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFAA 278
            FD  G +RD++QNHLLQIL + AM  P  L A+ IR+EKVKVL+S++ +   NV    + GQY       K  P Y ++    K S T TF A
Sbjct:  226 FDKAGQMRDMIQNHLLQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDRSNVREKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVA 318          

HSP 2 Score: 41.9726 bits (97), Expect = 4.680e-19
Identity = 22/48 (45.83%), Postives = 29/48 (60.42%), Query Frame = 1
Query:  292 LNNARWDGVPFLMKAGKALHTKRAEIRVQFKHVPGNLYKRKFWN*LTQ 435
            ++N RW GVPF ++ GK L TK +E+ V FK    NL+K   W  L Q
Sbjct:  323 IDNWRWAGVPFYLRTGKRLPTKCSEVVVYFKTPELNLFKES-WQDLPQ 369          
BLAST of EY679281 vs. ExPASy Swiss-Prot
Match: G6PD_NOSP7 (Glucose-6-phosphate 1-dehydrogenase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=zwf PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.081e-19
Identity = 36/93 (38.71%), Postives = 57/93 (61.29%), Query Frame = 3
Query:   12 FDNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMQPL----LLKNVIVGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFAA 278
            +++ G +RD++QNHL+Q+  L AME P ++DA+ IR EKVKVL++ +      L ++ + GQY       ++ P Y  +P V   S TPT+ A
Sbjct:  246 YESAGALRDMLQNHLMQLYCLTAMEAPNAMDADSIRTEKVKVLQATRLADVHNLSRSAVRGQYSAGWMKGQAVPGYRTEPGVDPNSTTPTYVA 338          

HSP 2 Score: 43.1282 bits (100), Expect = 6.081e-19
Identity = 16/41 (39.02%), Postives = 27/41 (65.85%), Query Frame = 1
Query:  286 FFLNNARWDGVPFLMKAGKALHTKRAEIRVQFKHVPGNLYK 408
            F ++N RW GVPF ++ GK +  K +EI + F+ VP  +++
Sbjct:  341 FLVDNWRWKGVPFYLRTGKRMPKKVSEIAIHFREVPSRMFQ 381          
BLAST of EY679281 vs. ExPASy Swiss-Prot
Match: G6PD_ANASP (Glucose-6-phosphate 1-dehydrogenase OS=Anabaena sp. (strain PCC 7120) GN=zwf PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.337e-18
Identity = 37/91 (40.66%), Postives = 54/91 (59.34%), Query Frame = 3
Query:   12 FDNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMQPL----LLKNVIVGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTF 272
            ++  G +RD++QNHL+Q+  L AME P S+DA+ IR EKVKVL++ +      L ++ I GQY       +  P Y  +P V   S TPT+
Sbjct:  246 YEKAGALRDMLQNHLMQLYCLTAMEAPNSMDADSIRTEKVKVLQATRLADVHNLSRSAIRGQYSAGWMKGQQVPGYRTEPGVDPNSSTPTY 336          

HSP 2 Score: 43.1282 bits (100), Expect = 1.337e-18
Identity = 16/41 (39.02%), Postives = 27/41 (65.85%), Query Frame = 1
Query:  286 FFLNNARWDGVPFLMKAGKALHTKRAEIRVQFKHVPGNLYK 408
            F ++N RW GVPF ++ GK +  K +EI + F+ VP  +++
Sbjct:  341 FLVDNWRWQGVPFYLRTGKRMPKKVSEISIHFRDVPSRMFQ 381          
BLAST of EY679281 vs. ExPASy Swiss-Prot
Match: G6PD_PSEAE (Glucose-6-phosphate 1-dehydrogenase OS=Pseudomonas aeruginosa GN=zwf PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.740e-18
Identity = 40/93 (43.01%), Postives = 56/93 (60.22%), Query Frame = 3
Query:   12 FDNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMQPL----LLKNVIVGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFAA 278
            FD  G +RD++QNHLLQ+L L AM+ P  L A+ IR+EKVKVLR+++P+    L   V+ GQY       K+ P Y ++    + S   TF A
Sbjct:  224 FDQAGQLRDMVQNHLLQLLCLIAMDPPSDLSADSIRDEKVKVLRALEPIPAEQLASRVVRGQYTAGFSDGKAVPGYLEEEHANRDSDAETFVA 316          

HSP 2 Score: 36.5798 bits (83), Expect = 1.740e-18
Identity = 14/38 (36.84%), Postives = 23/38 (60.53%), Query Frame = 1
Query:  292 LNNARWDGVPFLMKAGKALHTKRAEIRVQFKHVPGNLY 405
            + N RW GVPF ++ GK +  K ++I + FK  P  ++
Sbjct:  321 IRNWRWSGVPFYLRTGKRMPQKLSQIVIHFKEPPHYIF 358          
BLAST of EY679281 vs. ExPASy Swiss-Prot
Match: G6PD_BUCBP (Glucose-6-phosphate 1-dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=zwf PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.740e-18
Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 3
Query:   12 FDNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMQPL----LLKNVIVGQYKG---HNKGSKSYPAYTDDPTVPKGSLTPTFAAAALF 290
            FD  G I+D++QNHLLQIL +  M TP+      IR+EKVK+L+S++P     + KNVI+GQY     + K  KSY   T++        T TF +  ++
Sbjct:  224 FDTVGQIKDMVQNHLLQILTITTMSTPIDCHENSIRDEKVKILKSLRPFNINNIHKNVILGQYTSGIINQKKVKSYLDETNNQEYQMNKYTETFVSMKIY 323          

HSP 2 Score: 40.817 bits (94), Expect = 1.740e-18
Identity = 16/43 (37.21%), Postives = 28/43 (65.12%), Query Frame = 1
Query:  289 FLNNARWDGVPFLMKAGKALHTKRAEIRVQFKHVPGNLYKRKF 417
            +++N +W GVPF ++ GK L  K +EI + FK  P N++ + +
Sbjct:  323 YIDNDQWSGVPFYLRTGKRLPKKCSEIVIFFKTPPLNIFSKNY 365          
BLAST of EY679281 vs. ExPASy Swiss-Prot
Match: G6PD4_ARATH (Glucose-6-phosphate 1-dehydrogenase 4, chloroplastic OS=Arabidopsis thaliana GN=At1g09420 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.948e-18
Identity = 49/104 (47.12%), Postives = 66/104 (63.46%), Query Frame = 3
Query:   15 DNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMQPLLLKNVIVGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFAAAALFSQQCKMGWGSFP 326
            D YGIIRDI+ +H+LQ +AL AME P+SLD EDIRNEKVKVLRS++ +  ++VI+GQYK  ++         D   V    + PT+ AAAL+    +  W   P
Sbjct:  375 DGYGIIRDIVHSHILQTIALLAMEPPISLDGEDIRNEKVKVLRSIRKIDPRDVILGQYKSSSR---------DKNGVILNGVDPTYCAAALYIDNAR--WDGVP 467          

HSP 2 Score: 21.557 bits (44), Expect = 4.948e-18
Identity = 19/55 (34.55%), Postives = 29/55 (52.73%), Query Frame = 2
Query:  413 NFGTDLHKATNELVLRLPA*GKLYY*KIQQQSFLVLGRKLEIEANFI-LLYHPRY 574
            N G ++   TNEL+LR     +    KI  +   V G  L+++A+ + LLY  RY
Sbjct:  498 NIGINIDLGTNELILR-DEPDEAILVKINNK---VPGLGLQLDASELNLLYKDRY 548          
BLAST of EY679281 vs. ExPASy Swiss-Prot
Match: G6PD_CHLPN (Glucose-6-phosphate 1-dehydrogenase OS=Chlamydia pneumoniae GN=zwf PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.092e-17
Identity = 34/90 (37.78%), Postives = 53/90 (58.89%), Query Frame = 3
Query:   12 FDNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMQPLLLKNVIV-GQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFAA 278
            F+  G++RD++QNH++Q+L L  ME P + DA++IR EK+K+L+ + P    + IV GQY        S   Y ++  V K S   T+ A
Sbjct:  250 FEKSGMLRDMVQNHMMQLLCLLTMEPPTTFDADEIRKEKIKILQRISPFSEGSSIVRGQYGPGTVQGVSVLGYREEENVDKDSRVETYVA 339          

HSP 2 Score: 43.1282 bits (100), Expect = 1.092e-17
Identity = 19/38 (50.00%), Postives = 25/38 (65.79%), Query Frame = 1
Query:  292 LNNARWDGVPFLMKAGKALHTKRAEIRVQFKHVPGNLY 405
            +NN RW GVPF ++AGK L  K  +I + FK  P NL+
Sbjct:  344 INNPRWLGVPFYLRAGKRLAKKSTDISIIFKKSPYNLF 381          
The following BLAST results are available for this feature:
BLAST of EY679281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
G6PD_SYNE74.676e-1941.67Glucose-6-phosphate 1-dehydrogenase OS=Synechococc... [more]
G6PD_ECOLI4.680e-1944.09Glucose-6-phosphate 1-dehydrogenase OS=Escherichia... [more]
G6PD_ECOL64.680e-1944.09Glucose-6-phosphate 1-dehydrogenase OS=Escherichia... [more]
G6PD_ECO574.680e-1944.09Glucose-6-phosphate 1-dehydrogenase OS=Escherichia... [more]
G6PD_NOSP76.081e-1938.71Glucose-6-phosphate 1-dehydrogenase OS=Nostoc punc... [more]
G6PD_ANASP1.337e-1840.66Glucose-6-phosphate 1-dehydrogenase OS=Anabaena sp... [more]
G6PD_PSEAE1.740e-1843.01Glucose-6-phosphate 1-dehydrogenase OS=Pseudomonas... [more]
G6PD_BUCBP1.740e-1840.00Glucose-6-phosphate 1-dehydrogenase OS=Buchnera ap... [more]
G6PD4_ARATH4.948e-1847.12Glucose-6-phosphate 1-dehydrogenase 4, chloroplast... [more]
G6PD_CHLPN1.092e-1737.78Glucose-6-phosphate 1-dehydrogenase OS=Chlamydia p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-058-E02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679281 ID=EY679281; Name=EY679281; organism=Citrus sinensis; type=EST; length=992bp
CCACGCGTCCGTTTGATAACTATGGAATCATACGAGATATAATGCAAAAT
CATCTCTTGCAAATACTGGCATTATTTGCAATGGAGACTCCCGTCAGCTT
AGATGCGGAAGACATTAGAAATGAAAAGGTGAAGGTTCTTAGATCAATGC
AACCGCTTCTGCTTAAAAATGTAATTGTTGGTCAATACAAGGGCCACAAC
AAGGGTAGTAAATCATATCCTGCATATACTGATGACCCAACTGTGCCAAA
GGGTAGTCTCACGCCAACATTTGCCGCGGCTGCTCTTTTTTCTCAACAAT
GCAAGATGGGATGGGGTTCCTTTCCTGATGAAAGCAGGCAAAGCGCTCCA
TACCAAACGTGCAGAGATCAGAGTTCAGTTCAAACATGTCCCTGGAAACC
TGTACAAGCGGAAATTTTGGAACTGACTTACACAAGGCTACAAATGAGCT
TGTGCTCCGACTCCCAGCCTGAGGAAAGCTATATTACTGAAAGATTCAAC
AACAAAGTTTCCTGGTCCTGGGAAGGAAATTGGAAATCGAAGCGAACTTT
ATTTTGCTTTATCATCCAAGGTATCCATATAAAAATACCTAAATGCATTT
GAAAAGGGCGGGTCTTTAAAGGCAATTAAAAGGGTGAACCGGGGGTTGTT
TTATTCGGGAATGAATAAGTCTTTGATGCTTGCCCTGGGGCGTTTGTTTA
AACCCAATTATTAGAAGGGAAACTGGGAAAAAAAAAAAAAAAATTGGTAC
CCTAAAACATTATTCCCATATAAGGTGATACGAAGAGAACACATTTTGGA
GAATCACAATATTCAATTGCAAATCTAAAATTAAAGAAGTTCCAGAAAAG
GGGGGAAAATAACTAAAATCAGCAAATAGGGGAATAGTAAAGAAAGAGGG
ACACAAATATATTCTAGAGAGTTGTTCTTTTATCTATTCGATAATTGTTT
TATTCTCTGTCAGGTCCCCACCCTTTTGAGGGAGAGCTGCGG
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