EY679277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679277 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 3.518e-72 Identity = 130/149 (87.25%), Postives = 139/149 (93.29%), Query Frame = 1 Query: 1 TGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDARAGRMGGTTQYTVNNHMV 447 +GTH+A+MSSY+YIS GLR YN DN +DG YIAPAFMDKLVVHITKNFM+LPN+KVPLILGIWGGKGQGKSFQCELVFAKM I+PIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMC L INDLDA AGR+GGTTQYTVNN MV Sbjct: 102 SGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRLGGTTQYTVNNQMV 250
BLAST of EY679277 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 2.521e-70 Identity = 126/148 (85.14%), Postives = 136/148 (91.89%), Query Frame = 1 Query: 4 GTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDARAGRMGGTTQYTVNNHMV 447 GTHYAV+SS+ Y+S GLR YN DN DG YIAPAF+DKLVVHI KNFM+LPNIKVPLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA+D+I+KGKMC L INDLDA AGR+GGTTQYTVNN MV Sbjct: 107 GTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMCVLFINDLDAGAGRLGGTTQYTVNNQMV 254
BLAST of EY679277 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 263.077 bits (671), Expect = 4.301e-70 Identity = 130/148 (87.84%), Postives = 136/148 (91.89%), Query Frame = 1 Query: 4 GTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDARAGRMGGTTQYTVNNHMV 447 GTHYAVMSSY+Y+S GLR LDN DG YIAPAF+DKLVVHITKNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC L INDLDA AGR+GGTTQYTVNN MV Sbjct: 107 GTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRLGGTTQYTVNNQMV 252
BLAST of EY679277 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 263.077 bits (671), Expect = 4.301e-70 Identity = 126/148 (85.14%), Postives = 136/148 (91.89%), Query Frame = 1 Query: 4 GTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDARAGRMGGTTQYTVNNHMV 447 GTH AV+SSYDYISQG ++YN DN +DG YIA FMDKLVVH++KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI PIMMSAGELESGNAGEPAKLIRQRYREA+D+I+KGKM CL INDLDA AGRMGGTTQYTVNN MV Sbjct: 99 GTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMSCLFINDLDAGAGRMGGTTQYTVNNQMV 246
BLAST of EY679277 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 253.832 bits (647), Expect = 2.609e-67 Identity = 120/148 (81.08%), Postives = 133/148 (89.86%), Query Frame = 1 Query: 4 GTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDARAGRMGGTTQYTVNNHMV 447 GTH + SS++Y SQGLR Y++DN + YIAPAFMDKLVVHITKNF++LPNIK+PLILG+WGGKGQGKSFQCELVFAK+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC L INDL+ AGRMGGTTQYTVNN MV Sbjct: 101 GTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLEPGAGRMGGTTQYTVNNQMV 248
BLAST of EY679277 vs. ExPASy Swiss-Prot
Match: RCA_CHLRE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 2.891e-58 Identity = 108/148 (72.97%), Postives = 124/148 (83.78%), Query Frame = 1 Query: 4 GTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDARAGRMGGTTQYTVNNHMV 447 GTH AV+SS +Y+SQ ++N N DG YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQGK+FQC L + K+GI PI+MSAGELESGNAGEPAKLIR RYREA+DII+KG+MC L INDLDA AGRMG TTQYTVNN MV Sbjct: 78 GTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAKLIRTRYREASDIIKKGRMCSLFINDLDAGAGRMGDTTQYTVNNQMV 223
BLAST of EY679277 vs. ExPASy Swiss-Prot
Match: RCA_ANASC (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain CA / ATCC 33047) GN=rca PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 4.638e-40 Identity = 79/120 (65.83%), Postives = 97/120 (80.83%), Query Frame = 1 Query: 91 YIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCCLMINDLDARAGRMGGTTQYTVNNHMV 447 YIAP F+DKL VHITKNF++LP ++VPLILGI G KG+GK+FQCEL F KMG+ ++S GELES +AG+PA+LIR RYRE A++I+ +GKMC LMINDLDA AGR TQYTVN +V Sbjct: 4 YIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLISGGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQLV 123
BLAST of EY679277 vs. ExPASy Swiss-Prot
Match: RCA_ANASP (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain PCC 7120) GN=rca PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 6.057e-40 Identity = 79/120 (65.83%), Postives = 97/120 (80.83%), Query Frame = 1 Query: 91 YIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCCLMINDLDARAGRMGGTTQYTVNNHMV 447 YIAP F+DKL VHITKNF+++P ++VPLILGI G KG+GK+FQCEL F KMGI ++S GELES +AG+PA+LIR RYRE A++I+ +GKMC LMINDLDA AGR TQYTVN +V Sbjct: 4 YIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLISGGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQLV 123
BLAST of EY679277 vs. ExPASy Swiss-Prot
Match: RCA_ARAHY (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Arachis hypogaea GN=RCA PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.082e-20 Identity = 64/135 (47.41%), Postives = 66/135 (48.89%), Query Frame = 1 Query: 4 GTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDARAGRM 408 GTHYAVMSSY+YISQGLR VPLILGIWGGK MGINPIMMSAGELESGNAGEPA KMCCL INDLDA AGR+ Sbjct: 29 GTHYAVMSSYEYISQGLR------------------------------------VPLILGIWGGK--------------MGINPIMMSAGELESGNAGEPA-----------------KMCCLFINDLDAGAGRV 96
BLAST of EY679277 vs. ExPASy Swiss-Prot
Match: RCA_VITSX (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.979e-12 Identity = 38/61 (62.30%), Postives = 40/61 (65.57%), Query Frame = 1 Query: 238 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDARAGRMGGTT 420 +MGINPIMMSAGELESGNAGEPA KMCCL INDLDA AGR+G T Sbjct: 15 RMGINPIMMSAGELESGNAGEPA-----------------KMCCLFINDLDAGAGRIGVCT 58 The following BLAST results are available for this feature:
BLAST of EY679277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679277 ID=EY679277; Name=EY679277; organism=Citrus sinensis; type=EST; length=467bpback to top |