EY679276

Overview
NameEY679276
Unique NameEY679276
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1017
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSI (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 5.949e-18
Identity = 44/109 (40.37%), Postives = 56/109 (51.38%), Query Frame = 3
Query:  144 VVGWPPIRSFRKNSLATSSKNN------------------DEVDG-KAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSES 413
            VVGWPPIR FR NSL   +K N                  D+ +G K G  A +VKV+MDG    RKVDL  +  Y+ L+ ALE MF+  +IG   SH     ++L  S
Sbjct:  112 VVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNS 220          

HSP 2 Score: 46.595 bits (109), Expect = 5.949e-18
Identity = 20/33 (60.61%), Postives = 27/33 (81.82%), Query Frame = 1
Query:  418 LKDLLHGS*FVLTYEDKDGDWMLVGDVPCDMYI 516
            LK L + + + LTYED+DGDWMLVGDVP +M++
Sbjct:  214 LKLLDNSAEYQLTYEDRDGDWMLVGDVPWEMFV 246          
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: AUX22_SOYBN (Auxin-induced protein AUX22 OS=Glycine max GN=AUX22 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.829e-18
Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 3
Query:  141 QVVGWPPIRSFRKNSLATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCF 356
            QVVGWPP+ S+RK +    S N        G+S ++VKVSMDGAP+LRK+DL  +  Y +L+ AL+K+F C+
Sbjct:   64 QVVGWPPVCSYRKKN----SMNE-------GASKMYVKVSMDGAPFLRKIDLGLHKGYSDLALALDKLFGCY 124          

HSP 2 Score: 41.9726 bits (97), Expect = 7.829e-18
Identity = 16/20 (80.00%), Postives = 19/20 (95.00%), Query Frame = 1
Query:  457 YEDKDGDWMLVGDVPCDMYI 516
            YEDKDGDWMLVGDVP +M++
Sbjct:  142 YEDKDGDWMLVGDVPWEMFM 161          
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: AX22A_PHAAU (Auxin-induced protein 22A OS=Phaseolus aureus GN=AUX22A PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.019e-17
Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 3
Query:  141 QVVGWPPIRSFRK-NSLATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCF 356
            QVVGWPP+ S+RK NS+  +SK             ++VKVSMDGAP+LRK+DL  +  Y +L+ ALEK+F C+
Sbjct:   64 QVVGWPPVCSYRKKNSVNEASK-------------MYVKVSMDGAPFLRKMDLGMHKGYSDLAFALEKLFGCY 123          

HSP 2 Score: 42.743 bits (99), Expect = 1.019e-17
Identity = 20/33 (60.61%), Postives = 26/33 (78.79%), Query Frame = 1
Query:  418 LKDLLHGS*FVLTYEDKDGDWMLVGDVPCDMYI 516
            LK++ +G   V  YEDKDGDWMLVGDVP +M++
Sbjct:  129 LKNVENGE-HVPIYEDKDGDWMLVGDVPWEMFM 160          
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: IAA11_ARATH (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana GN=IAA11 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.313e-17
Identity = 34/84 (40.48%), Postives = 48/84 (57.14%), Query Frame = 3
Query:  141 QVVGWPPIRSFRKNSLATSSK---------------NNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMF 347
            QVVGWPPIR++R NS+   +K               N +  D     +++FVKV+MDG P  RK+DL  +  Y+ LS+ LE+MF
Sbjct:   88 QVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMF 171          

HSP 2 Score: 45.4394 bits (106), Expect = 1.313e-17
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 1
Query:  448 VLTYEDKDGDWMLVGDVPCDMYI 516
            VLTYEDK+GDWMLVGDVP  M+I
Sbjct:  202 VLTYEDKEGDWMLVGDVPWGMFI 224          
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: IAA6_ARATH (Auxin-responsive protein IAA6 OS=Arabidopsis thaliana GN=IAA6 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 1.407e-16
Identity = 34/75 (45.33%), Postives = 45/75 (60.00%), Query Frame = 3
Query:  141 QVVGWPPIRSFRKNSLATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIG 365
            Q VGWPP+ S+R+       KNN+E     G    +VKVSMDG PY+RK+DL + + Y  L + LE +F C  IG
Sbjct:   70 QAVGWPPVCSYRRK------KNNEEASKAIG----YVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGIG 134          

HSP 2 Score: 40.4318 bits (93), Expect = 1.407e-16
Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = 1
Query:  445 FVLTYEDKDGDWMLVGDVPCDMY 513
            +++ YEDKD DWMLVGDVP  M+
Sbjct:  144 YIIIYEDKDRDWMLVGDVPWQMF 166          
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: IAA5_ARATH (Auxin-responsive protein IAA5 OS=Arabidopsis thaliana GN=IAA5 PE=2 SV=3)

HSP 1 Score: 65.4698 bits (158), Expect = 1.418e-16
Identity = 31/72 (43.06%), Postives = 48/72 (66.67%), Query Frame = 3
Query:  141 QVVGWPPIRSFRKNSLATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCF 356
            QVVGWPP+ S+R+ +    +K++            +VKVS+DGA +LRK+DL+ Y  YQ+L+SAL+ +F C+
Sbjct:   53 QVVGWPPVCSYRRKNSLERTKSS------------YVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCY 112          

HSP 2 Score: 42.3578 bits (98), Expect = 1.418e-16
Identity = 19/31 (61.29%), Postives = 22/31 (70.97%), Query Frame = 1
Query:  424 DLLHGS*FVLTYEDKDGDWMLVGDVPCDMYI 516
            D L  S  V  YEDKDGDWML GDVP +M++
Sbjct:  117 DTLKESECVPIYEDKDGDWMLAGDVPWEMFL 147          
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: IAA18_ORYSJ (Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica GN=IAA18 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.795e-16
Identity = 46/101 (45.54%), Postives = 57/101 (56.44%), Query Frame = 3
Query:  144 VVGWPPIRSFRKNSLATSS------KNNDEVDGKAG---SSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKV 419
            VVGWPPIRSFR+N    SS      + NDE D KA         VK++MDG P  RKVDL+ Y  YQ+LSSA+E++F  F   Q     A   E  +E K+
Sbjct:  168 VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKI 268          

HSP 2 Score: 33.4982 bits (75), Expect = 1.795e-16
Identity = 12/24 (50.00%), Postives = 17/24 (70.83%), Query Frame = 1
Query:  445 FVLTYEDKDGDWMLVGDVPCDMYI 516
            + L YED DGD ML GD+P  +++
Sbjct:  279 YTLVYEDNDGDRMLAGDIPWKVFV 302          
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: AX22D_PHAAU (Auxin-induced protein 22D OS=Phaseolus aureus GN=AUX22D PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.415e-16
Identity = 46/126 (36.51%), Postives = 66/126 (52.38%), Query Frame = 3
Query:   69 ANNETITNHNGXXXXXXXXXXXXXQVVGWPPIRSFRKNSLATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKVEGSATWLII 446
            ++ E+I+N +              QVVGWPPIRS+RKN++    +   E +G      ++VKVSM GAPYLRK+DLK Y  Y EL  ALE MF C   G+Y           + +  +    W+++
Sbjct:   46 SDEESISNGSDVTKEDNVVPPAKAQVVGWPPIRSYRKNNVQQKKEEESEGNG------MYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCI-FGEYSEREGYNGSEYAPTYEDKDGDWMLV 164          
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: IAA26_ARATH (Auxin-responsive protein IAA26 OS=Arabidopsis thaliana GN=IAA26 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 3.051e-16
Identity = 39/100 (39.00%), Postives = 51/100 (51.00%), Query Frame = 3
Query:  144 VVGWPPIRSFRKNSLATSSKN-----------NDEVDGK----AGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGRE 398
            VVGWPP+RSFRKN  +TSS             N   DG+         +FVK++MDG P  RKVDL  Y+ Y++LS  ++K+F      Q       G E
Sbjct:  104 VVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEE 203          

HSP 2 Score: 38.891 bits (89), Expect = 3.051e-16
Identity = 16/24 (66.67%), Postives = 19/24 (79.17%), Query Frame = 1
Query:  445 FVLTYEDKDGDWMLVGDVPCDMYI 516
            F LTYED +GD MLVGDVP  M++
Sbjct:  216 FTLTYEDNEGDKMLVGDVPWQMFV 239          
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: AX22E_PHAAU (Auxin-induced protein 22E OS=Phaseolus aureus GN=AUX22E PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.119e-16
Identity = 45/102 (44.12%), Postives = 61/102 (59.80%), Query Frame = 3
Query:  141 QVVGWPPIRSFRKNSLATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKVEGSATWLII 446
            QVVGWPPIRSFRKNSL    K  ++ DG    + +++KVSM GAPYLRK+DLK Y  Y EL  AL+ +F C T G+Y           + +  +    W+++
Sbjct:   80 QVVGWPPIRSFRKNSL--QQKKVEQGDG----TGMYLKVSMAGAPYLRKIDLKVYKSYPELLKALQNLFKC-TFGEYSEREGYNGSEYAPTYEDKDGDWMLV 174          
The following BLAST results are available for this feature:
BLAST of EY679276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
IAA10_ORYSI5.949e-1840.37Auxin-responsive protein IAA10 OS=Oryza sativa sub... [more]
AUX22_SOYBN7.829e-1848.61Auxin-induced protein AUX22 OS=Glycine max GN=AUX2... [more]
AX22A_PHAAU1.019e-1749.32Auxin-induced protein 22A OS=Phaseolus aureus GN=A... [more]
IAA11_ARATH1.313e-1740.48Auxin-responsive protein IAA11 OS=Arabidopsis thal... [more]
IAA6_ARATH1.407e-1645.33Auxin-responsive protein IAA6 OS=Arabidopsis thali... [more]
IAA5_ARATH1.418e-1643.06Auxin-responsive protein IAA5 OS=Arabidopsis thali... [more]
IAA18_ORYSJ1.795e-1645.54Auxin-responsive protein IAA18 OS=Oryza sativa sub... [more]
AX22D_PHAAU2.415e-1636.51Auxin-induced protein 22D OS=Phaseolus aureus GN=A... [more]
IAA26_ARATH3.051e-1639.00Auxin-responsive protein IAA26 OS=Arabidopsis thal... [more]
AX22E_PHAAU4.119e-1644.12Auxin-induced protein 22E OS=Phaseolus aureus GN=A... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-058-D07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679276 ID=EY679276; Name=EY679276; organism=Citrus sinensis; type=EST; length=1017bp
TCCGGGGCCTCAAACCGCTAAAGGCCCTTTAGATGGCCAACCAAAAAGCA
GTGCAGGAAAGGCCTCATGCTAACAATGAGACCATAACAAACCATAATGG
TTCTGCAAGTAACAGTAGCAGTGCACCTGCTGCCAAGGCACAGGTTGTGG
GTTGGCCACCAATTAGATCATTTAGGAAGAATTCATTGGCCACTTCGTCT
AAAAATAATGACGAAGTAGATGGAAAAGCAGGTTCCAGTGCTCTGTTTGT
CAAGGTCAGCATGGATGGTGCTCCTTATTTAAGAAAAGTGGACTTGAAAA
ATTACTCTAAATATCAGGAACTATCTTCTGCCCTTGAGAAGATGTTCAGC
TGCTTTACAATTGGGCAATATGGATCTCATGGGGCTCTGGGCAGGGAGAT
GCTGAGTGAAAGCAAAGTTGAAGGATCTGCTACATGGCTCATAATTCGTT
CTCACTTATGAAGACAAAGATGGGGATTGGATGCTTGTGGGTGATGTCCC
CTGTGATATGTATATTTGATACATGCAAGAGGTTGAGGAATATTAAGAGC
ACCTGATGCCATTGGCCTAATCGCCCAAGGGCTTGTGGAGAAATGCCCGG
AACCAAAACCAAGCATATGGTTCAACATAATTGTTGGGCATTCATCCCAT
CAAATTTTCGGTGGATAAAAATACTTGGGCAAATAACAAAAAAAAAAATG
GAAACAAATTCAATGCTTAGGGGATGTTGGGAAGGCACCCGCTTTTTCCT
GTGTTACCCCCATTAATACCTTTTACATGGCGATGAATTTTCTCAGGTTC
TCTGTAGCCAACTGTATTGTTGACTTTTTCAATTTTAAAATTCTTAATAC
ACAAACGTAAAAAACCATTTTCTTTTTTTCGAATTAGAAACCCTTCATCA
AAAAATAGGTTTTCCCCCCCTATAAGAAATTTTCTGAATAAATAATTTTA
TTTGTTTTCTTTACAAACACGGAATCGCCTAAAATTATTTTACTGGCACA
TAAGGAGACGTACCTTG
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