EY744633

Overview
NameEY744633
Unique NameEY744633
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length958
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744633 vs. ExPASy Swiss-Prot
Match: CAD96_DROME (Tyrosine kinase receptor Cad96Ca OS=Drosophila melanogaster GN=Cad96Ca PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 8.196e-11
Identity = 43/121 (35.54%), Postives = 65/121 (53.72%), Query Frame = 2 
Query:   53 CTIGDLGLSK-VKQQTLVSGGVRGTLP--WMAPELLSGKSHMVTEKIDVYSFGIVMWELLT-GDEPYADMHCASIIGGIVNNTLRPQIPTWCDPEWRSLMESCWASDPAERPSFSEISRRL 403
            C + D G ++ V    +      G LP  WMA E L    ++ + K D++SFGI+MWE++T G  PY  +  A ++   V +  R + P  C  E  ++M  CW+ DP ERP F+EI + L
Sbjct:  624 CKVADFGFARDVITSKIYERKSEGKLPIRWMATESLY--DNIFSVKSDIWSFGILMWEIVTLGSTPYPGISAADVMRK-VRDGYRLEKPEHCRRELYNIMYYCWSHDPQERPLFAEIIQML 741
The following BLAST results are available for this feature:
BLAST of EY744633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
CAD96_DROME8.196e-1135.54Tyrosine kinase receptor Cad96Ca OS=Drosophila mel... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-002-G07-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744633 ID=EY744633; Name=EY744633; organism=Citrus sinensis; type=EST; length=958bp
CTTGAAATGTGAAAATCTGTTGGTGAATATGAGAGACCCTCAGCGGCCTG
TATGCACCATTGGTGATTTGGGCTTGTCGAAGGTGAAACAACAGACTTTA
GTATCGGGAGGTGTTCGTGGAACTTTACCATGGATGGCACCTGAGCTCCT
GAGTGGAAAAAGTCACATGGTAACAGAAAAGATTGATGTTTACTCATTTG
GGATTGTTATGTGGGAACTGCTGACGGGGGATGAACCGTATGCTGATATG
CATTGTGCTTCTATCATTGGAGGAATTGTGAATAACACATTACGCCCCCA
AATTCCAACATGGTGTGATCCTGAATGGAGGTCTTTGATGGAAAGTTGTT
GGGCCTCTGATCCAGCTGAGAGACCTTCGTTTTCAGAAATTTCTCGGAGG
CTACGGAGTATGGCTGCTGCAATAAATGTGAAATAGATATATTATAACCG
GTTGATTTCACATATTGCTCTGTCGTATTGGAATATGGAAACCATAAAAA
AGAATATATAATTAAGTTTTAGATCACACCTGTCTTGGTTTTGAAGAATT
GCAGGGTAATTAAAGCCTTGGTGCATCCTTAATCAACCCTTCTGTTGTAC
TGGCCTGAAAGGGTATTGCAAGAACGCATAATTTGATGGCGGGCCTAAAA
ACCCCCCCTGAAGAATTAAAAAAACACCCAATTCAAGGGGGGAATGCACA
TTCAGAAAGGTTTTTGGTTTTCCTCAATACATTAAGATGGCGGTATAAGG
GGGGGGAGCCACTATTAACGGCGAATGGGAACCACTTTTCCTTCCGAGAA
AATTGCAAAAAAAAATATAAAAAAAATAAAACGTGGTCTCTTATTTTCAT
ACCGGAAAAAACACAAGAGACATAAATTATCCTGGGTTCCACAAATTATT
TACCAAAAAATATCTTAGGACCCTATTTTGGTTGGGTGTTAATAAAAATA
TATAATAC
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