EY679191

Overview
NameEY679191
Unique NameEY679191
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length990
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679191 vs. ExPASy Swiss-Prot
Match: FAL1_VANPO (ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=FAL1 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.943e-27
Identity = 61/146 (41.78%), Postives = 93/146 (63.70%), Query Frame = 3
Query:   30 ITLKGITQYYAPFEERQ-KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIYIQAVNGVINFDFPKNSETYLHKVGRSERFGHLGLTVNLIT*EDRFKLEK 464
            I+L+GI QYY   E+   K   L  L+  L I Q +IFCN+  +V+ L+ K+T+  ++   +H  M Q+ RN+V  DFR+G  R L+ TD++ RGI +Q V+ VIN+D P+  E Y+H++GRS RFG  G+ +N IT  D  K+++
Sbjct:  234 ISLEGIKQYYVNVEKEDWKFDTLCDLYDSLTITQCVIFCNTKKKVDWLSAKLTQSNFAVVSMHGDMKQEDRNKVMSDFRSGHSRVLISTDVWARGIDVQQVSLVINYDIPEIMENYIHRIGRSGRFGRKGVAINFITSSDLSKMKE 379          
BLAST of EY679191 vs. ExPASy Swiss-Prot
Match: FAL1_CANGA (ATP-dependent RNA helicase FAL1 OS=Candida glabrata GN=FAL1 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.943e-27
Identity = 60/146 (41.10%), Postives = 94/146 (64.38%), Query Frame = 3
Query:   30 ITLKGITQYYAPFEERQ-KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIYIQAVNGVINFDFPKNSETYLHKVGRSERFGHLGLTVNLIT*EDRFKLEK 464
            ITL+GI QYY   E+ + K   L  ++  L I Q +IFCNS  +V+ LA K+ +  ++   +H  M QD R+RV ++FR G  R L+ TD++ RGI +Q V+ VIN+D P+ +E Y+H++GRS RFG  G+ +N +T  D  ++++
Sbjct:  234 ITLEGIKQYYVNVEKEEWKFDTLCDIYDSLTITQCVIFCNSKKKVDWLAHKLKQSNFAVISMHGDMKQDERDRVMNEFRTGQSRVLISTDVWARGIDVQQVSLVINYDLPEITENYVHRIGRSGRFGRKGVAINFLTKIDASRMKE 379          
BLAST of EY679191 vs. ExPASy Swiss-Prot
Match: IF4A_LODEL (ATP-dependent RNA helicase eIF4A OS=Lodderomyces elongisporus GN=TIF1 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.843e-27
Identity = 58/140 (41.43%), Postives = 89/140 (63.57%), Query Frame = 3
Query:   30 ITLKGITQYYAPFE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIYIQAVNGVINFDFPKNSETYLHKVGRSERFGHLGLTVNLIT*ED 446
            +TL+GI QY+   E E  K  CL  L+  + + Q++IFCN+ ++VE L  K+ E  ++   IHA + Q  R+ +  +FR+G+ R L+ TDL  RGI +Q V+ VIN+D P N E Y+H++GR  RFG  G+ +N +T +D
Sbjct:  231 LTLEGIKQYFINVEVEDYKFDCLVDLYDSISVTQAVIFCNTRSKVEFLTNKLREQKFTVSAIHADLPQGERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDKD 370          
BLAST of EY679191 vs. ExPASy Swiss-Prot
Match: IF4A_CANGA (ATP-dependent RNA helicase eIF4A OS=Candida glabrata GN=TIF1 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 6.556e-27
Identity = 57/140 (40.71%), Postives = 89/140 (63.57%), Query Frame = 3
Query:   30 ITLKGITQYYAPFEERQ-KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIYIQAVNGVINFDFPKNSETYLHKVGRSERFGHLGLTVNLIT*ED 446
            +TL+GI Q+Y   EE Q K  CL  L+  + + Q++IFCN+  +VE L +++T   ++   I++ + Q  R+ +  +FR+G+ R L+ TDL  RGI +Q V+ VIN+D P N E Y+H++GR  RFG  G+ +N I  ED
Sbjct:  230 LTLEGIKQFYVNVEEEQFKYDCLTDLYDSISVTQAVIFCNTRRKVEELTQRLTADNFTVSSIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPTNKENYIHRIGRGGRFGRKGVAINFIVNED 369          
BLAST of EY679191 vs. ExPASy Swiss-Prot
Match: IF4A_CANAL (ATP-dependent RNA helicase eIF4A OS=Candida albicans GN=TIF1 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 6.556e-27
Identity = 58/140 (41.43%), Postives = 88/140 (62.86%), Query Frame = 3
Query:   30 ITLKGITQYYAPFE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIYIQAVNGVINFDFPKNSETYLHKVGRSERFGHLGLTVNLIT*ED 446
            +TL+GI Q+Y   E E  K  CL  L+  + + Q++IFCN+ ++VE L  K+ E  ++   IHA + Q  R+ +  +FR+G+ R L+ TDL  RGI +Q V+ VIN+D P N E Y+H++GR  RFG  G+ +N +T  D
Sbjct:  231 LTLEGIKQFYINVELEDYKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDRD 370          
BLAST of EY679191 vs. ExPASy Swiss-Prot
Match: IF4A_TRYCR (Probable eukaryotic initiation factor 4A OS=Trypanosoma cruzi GN=Tc00.1047053511585.190 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.118e-26
Identity = 58/139 (41.73%), Postives = 89/139 (64.03%), Query Frame = 3
Query:   30 ITLKGITQYYAPFEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIYIQAVNGVINFDFPKNSETYLHKVGRSERFGHLGLTVNLIT*ED 446
            +TL+GI QY+   EE  K+  L  L+  + I QS+IF N+  +V+ LA+++ +  ++   +H++M +  R +V   FRNG+ R LV TDL  RGI +  VN VINFD P N E+YLH++GR  R+G  G+ +N +T +D
Sbjct:  238 LTLEGIKQYFIAVEEEHKLDTLMDLYETVSIAQSVIFANTRRKVDWLAQQLNQSNHTVSCMHSEMPKQDREKVMSTFRNGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKESYLHRIGRGGRYGRKGVAINFVTQKD 376          
BLAST of EY679191 vs. ExPASy Swiss-Prot
Match: IF4A_LEIMA (Probable eukaryotic initiation factor 4A OS=Leishmania major GN=LMJ_0078 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.118e-26
Identity = 58/139 (41.73%), Postives = 89/139 (64.03%), Query Frame = 3
Query:   30 ITLKGITQYYAPFEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIYIQAVNGVINFDFPKNSETYLHKVGRSERFGHLGLTVNLIT*ED 446
            +TL+GI Q++   EE  K+  L  L+  + I QS+IF N+  +V+ +A+K+ +  ++   +HA+M +  R RV + FR+G+ R LV TDL  RGI +  VN VINFD P N E YLH++GR  R+G  G+ +N +T +D
Sbjct:  237 LTLEGIKQFFIAVEEEHKLDTLMDLYETVSIAQSVIFANTRRKVDWIAEKLNQSNHTVSSMHAEMPKSDRERVMNTFRSGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTEKD 375          
BLAST of EY679191 vs. ExPASy Swiss-Prot
Match: IF4A_LEIIN (Probable eukaryotic initiation factor 4A OS=Leishmania infantum GN=LinJ01.0780 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.118e-26
Identity = 58/139 (41.73%), Postives = 89/139 (64.03%), Query Frame = 3
Query:   30 ITLKGITQYYAPFEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIYIQAVNGVINFDFPKNSETYLHKVGRSERFGHLGLTVNLIT*ED 446
            +TL+GI Q++   EE  K+  L  L+  + I QS+IF N+  +V+ +A+K+ +  ++   +HA+M +  R RV + FR+G+ R LV TDL  RGI +  VN VINFD P N E YLH++GR  R+G  G+ +N +T +D
Sbjct:  237 LTLEGIKQFFIAVEEEHKLDTLMDLYETVSIAQSVIFANTRRKVDWIAEKLNQSNHTVSSMHAEMPKSDRERVMNTFRSGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTEKD 375          
BLAST of EY679191 vs. ExPASy Swiss-Prot
Match: IF4A_LEIBR (Probable eukaryotic initiation factor 4A OS=Leishmania braziliensis GN=LbrM01_V2.0740 PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 1.118e-26
Identity = 58/139 (41.73%), Postives = 89/139 (64.03%), Query Frame = 3
Query:   30 ITLKGITQYYAPFEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIYIQAVNGVINFDFPKNSETYLHKVGRSERFGHLGLTVNLIT*ED 446
            +TL+GI Q++   EE  K+  L  L+  + I QS+IF N+  +V+ +A+K+ +  ++   +HA+M +  R RV + FR+G+ R LV TDL  RGI +  VN VINFD P N E YLH++GR  R+G  G+ +N +T +D
Sbjct:  237 LTLEGIKQFFIAVEEEHKLDTLMDLYETVSIAQSVIFANTRRKVDWIAEKLNQSNHTVSSMHAEMPKSDRERVMNTFRSGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTEKD 375          
BLAST of EY679191 vs. ExPASy Swiss-Prot
Match: IF4A_YEAST (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae GN=TIF1 PE=1 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 1.907e-26
Identity = 56/140 (40.00%), Postives = 88/140 (62.86%), Query Frame = 3
Query:   30 ITLKGITQYYAPFEERQ-KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIYIQAVNGVINFDFPKNSETYLHKVGRSERFGHLGLTVNLIT*ED 446
            +TL+GI Q+Y   EE + K  CL  L+  + + Q++IFCN+  +VE L  K+    ++   I++ + Q  R+ +  +FR+G+ R L+ TDL  RGI +Q V+ VIN+D P N E Y+H++GR  RFG  G+ +N +T ED
Sbjct:  229 LTLEGIKQFYVNVEEEEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNED 368          
The following BLAST results are available for this feature:
BLAST of EY679191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FAL1_VANPO2.943e-2741.78ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma... [more]
FAL1_CANGA2.943e-2741.10ATP-dependent RNA helicase FAL1 OS=Candida glabrat... [more]
IF4A_LODEL3.843e-2741.43ATP-dependent RNA helicase eIF4A OS=Lodderomyces e... [more]
IF4A_CANGA6.556e-2740.71ATP-dependent RNA helicase eIF4A OS=Candida glabra... [more]
IF4A_CANAL6.556e-2741.43ATP-dependent RNA helicase eIF4A OS=Candida albica... [more]
IF4A_TRYCR1.118e-2641.73Probable eukaryotic initiation factor 4A OS=Trypan... [more]
IF4A_LEIMA1.118e-2641.73Probable eukaryotic initiation factor 4A OS=Leishm... [more]
IF4A_LEIIN1.118e-2641.73Probable eukaryotic initiation factor 4A OS=Leishm... [more]
IF4A_LEIBR1.118e-2641.73Probable eukaryotic initiation factor 4A OS=Leishm... [more]
IF4A_YEAST1.907e-2640.00ATP-dependent RNA helicase eIF4A OS=Saccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-056-D03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679191 ID=EY679191; Name=EY679191; organism=Citrus sinensis; type=EST; length=990bp
ACCATATGTTATTAATCTGACCCTTTTAGATTACTCTCAAGGGAATTACC
CAATACTATGCTCCTTTTGAAGAAAGGCAGAAAGTCCACTGCCTCAACAC
ACTTTTCTCTAAGTTGCAAATTAATCAATCTATCATTTTCTGCAATTCGG
TGAATCGGGTTGAACTCCTTGCCAAGAAAATTACAGAACTTGGGTACTCT
TGTTTTTATATCCATGCAAAGATGCTGCAAGACCATCGCAACAGAGTATT
TCATGACTTCCGCAATGGTGCATGCAGGAATCTTGTTTGTACTGACCTAT
TTACGAGGGGTATATACATTCAAGCAGTGAATGGAGTCATTAACTTTGAT
TTTCCTAAGAACTCTGAGACATATCTGCACAAAGTTGGGCGATCTGAAAG
GTTTGGACACCTTGGATTAACTGTAAATTTGATTACTTAAGAAGACCGCT
TCAAACTTGAAAAGGATTGAACAAGAAATCGGGAAAGAATCTAACAAAAA
ACCTCAGCTAATTGATCAGAGAATTAACAGAAGGAGATTAATGGGCCGGT
AGCTCGCTAGATATACCATGGTAGGTAGCTAGAGGATTCCTGAAAGCAGG
TGAATATAAGGCTCTGGTTCCAACAGCTAAAGGATAAATTTATTTAATAT
GTCTTATGTAGGTTATGAGGAAAAATATGCAACTTGGAGTTGCTCATATT
TAACCTTTTTAAACTATTATCCTTCCATGGGTTTCGGGTAATTTCTAAAG
TACATAAACTATAATTAAGAGCAAAGTCATAGAAGATTATTAAACACAAT
ATCGAAAAATCCCCCACAATCTAACAACGAGGGAAAGCCAATACCTACAA
CTTAAACGCTTTATATGTCACAGATGAAATTCAACTAGTGTTTCTATTGA
AAAATATTACAACCACCATACTATATTTTAATTAAATTAATAATATTATT
CAATTAGCACGATCAAATATTTATGAAAAGGATGTATTAG
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