EY679162

Overview
NameEY679162
Unique NameEY679162
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679162 vs. ExPASy Swiss-Prot
Match: Y4NA_RHISN (Uncharacterized peptidase y4nA OS=Rhizobium sp. (strain NGR234) GN=NGR_a02410 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.418e-20
Identity = 48/107 (44.86%), Postives = 65/107 (60.75%), Query Frame = 3
Query:   12 DGSHPCPFYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD 332
            DG++P   Y YGGF I + PS+S     L    G  + +ANIRGGGE+G +WH  G    +Q  +DDF + ++ LI+   T +  L I GGSNGGLL+G  + QRPD
Sbjct:  492 DGTNPTILYAYGGFQIPMQPSYSAVLGKLWLEKGGAYALANIRGGGEFGPKWHDAGLKTNRQRVYDDFQAVAQDLIAKKVTSTPHLGIMGGSNGGLLMGVQMIQRPD 598          

HSP 2 Score: 20.7866 bits (42), Expect = 2.418e-20
Identity = 10/28 (35.71%), Postives = 14/28 (50.00%), Query Frame = 2
Query:  407 SWVPDFGCTQDYEEFYWLIKNSPLHIVR 490
            SW  ++G   D  E  +L   SP H V+
Sbjct:  623 SWQAEYGSPDDPVEGAFLRSISPYHNVK 650          
BLAST of EY679162 vs. ExPASy Swiss-Prot
Match: PTRB_ECOLI (Protease 2 OS=Escherichia coli (strain K12) GN=ptrB PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.582e-19
Identity = 46/110 (41.82%), Postives = 66/110 (60.00%), Query Frame = 3
Query:    9 RDGSHPCPFYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDSF 338
            R G +P   YGYG +  S+   FS SR  L+   G V+ I ++RGGGE G++W++ G   KK+N F+D++ A + L+  GY         GGS GG+L+G  INQRP+ F
Sbjct:  441 RKGHNPLLVYGYGSYGASIDADFSFSRLSLLDR-GFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYAMGGSAGGMLMGVAINQRPELF 549          
BLAST of EY679162 vs. ExPASy Swiss-Prot
Match: PTRB_MORLA (Protease 2 OS=Moraxella lacunata GN=ptrB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.350e-17
Identity = 45/109 (41.28%), Postives = 60/109 (55.05%), Query Frame = 3
Query:   12 DGSHPCPFYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDSF 338
            +G  P   YGYG +  +  P F   R  L+   G VF  A +RGG E G  W++ G +  K+N F DFI+A+++LI   YT   K+   GGS GGLLVGA  N   + F
Sbjct:  444 NGPAPLILYGYGSYGSNSDPRFDPYRLPLLEK-GIVFVTAQVRGGSEMGRGWYEDGKMQNKRNTFTDFIAAAKHLIDQNYTSPTKMAARGGSAGGLLVGAVANMAGELF 551          
BLAST of EY679162 vs. ExPASy Swiss-Prot
Match: PPCEL_XENLA (Prolyl endopeptidase-like OS=Xenopus laevis GN=prepl PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.071e-11
Identity = 37/105 (35.24%), Postives = 52/105 (49.52%), Query Frame = 3
Query:   24 PCPFYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDSF 338
            P   + YG + + +  SF V + +L+   G +    ++RGGGE G  WH  G L KK N  +D  S   +L   GY+Q     +E  S GG+L GA  N  P  F
Sbjct:  452 PLLIHVYGAYGMDLNMSFKVEKRMLVEE-GWLLAYCHVRGGGELGCNWHSEGVLDKKLNGLEDLGSCISHLHGLGYSQPHYSAVEAASAGGVLAGALCNSAPRLF 555          
The following BLAST results are available for this feature:
BLAST of EY679162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
Y4NA_RHISN2.418e-2044.86Uncharacterized peptidase y4nA OS=Rhizobium sp. (s... [more]
PTRB_ECOLI1.582e-1941.82Protease 2 OS=Escherichia coli (strain K12) GN=ptr... [more]
PTRB_MORLA7.350e-1741.28Protease 2 OS=Moraxella lacunata GN=ptrB PE=3 SV=1[more]
PPCEL_XENLA2.071e-1135.24Prolyl endopeptidase-like OS=Xenopus laevis GN=pre... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-056-A04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679162 ID=EY679162; Name=EY679162; organism=Citrus sinensis; type=EST; length=936bp
CACGCGTCCGGGATGGATCGCACCCATGTCCCTTTTATGGATATGGTGGA
TTTAACATCAGTGTGACACCTTCCTTCAGTGTCAGTCGTACTATTCTCAT
GAGGCATCTTGGTGCGGTCTTCTGCATTGCCAACATCCGAGGTGGTGGAG
AGTATGGAGAGGAGTGGCATAAAGGAGGTGCACTTGCAAAAAAGCAGAAT
TGCTTTGACGACTTTATTTCTGCATCCGAGTATCTAATATCTGCTGGTTA
TACCCAGTCCAGAAAGTTGTGTATTGAAGGGGGGAGCAATGGCGGGCTTC
TTGTTGGGGCTTGCATAAATCAGAGACCTGATTCTTTTTGGTTGTGCTCT
GGCTCATGTTGGTGTAATGGACATGCTTCGGTACCATCAGTTTACCATAG
GTCATGTCATGGGTTCCCGATTTTGGTTGTACACAGGATTATGAAGAGTT
CTATTGGCTAATCAAGAACTCCCCTCTACATATTGTGAGAAGACCATGGG
AATCAAACCCTTACAAACCTTTTTCGGTACCCCTCCTACCCTATTGATGA
AGTCCAATCTGATGATTCTGTTGGGCCTTTGCACTTCATTAAATTATTGG
CGATTATGAAAAAGGTTTAATAGTAGAACTTGGAAAATCATCCCCCAAAC
CTATCCATATAATGGCCGCATTTGTCTATGGTTGGACTGGATCTGGAATT
TCACATAAAAACAGTTTGATAAACTGTTGATCCCTATACTTCTCTGGGAA
ATAGTTTGGAAGCTTTTTGTGTTATTTATCCCCCTTAACTACCAAAAAAA
AACTTGTTGGGGAGTCAAAATTTCTGCAACCAGATATATAACTCCCTCTT
TTTTCTTTTTTTTTCTGTTTTTTGTTCTCAAATATACGATATCTTTTTTA
TCTAGCGTTAGATGACACTTTATCTATTGTTTACTT
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