EY679145

Overview
NameEY679145
Unique NameEY679145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679145 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.564e-22
Identity = 74/179 (41.34%), Postives = 95/179 (53.07%), Query Frame = 1
Query:   85 VNDFCVADLKLSDSPA------GYPCVPPAMVTADDFGVSGLGVAGNT-TSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAGGG-YVKTLKKGDIMIFPQGLLHFQVISGGGRSPRFC-LPSAAPILGLQITDFRLICVTPCLSPN 594
            + DFC+      ++PA      G  C  P +VTADDF  SGL  A  T +S + + VT   V Q P +N LG+SL R+D    G  P HTHP A+EILLV  G +  GF SS      + KTL KGD+ +FP+GL+HFQV  G   +  F  L S  P  G+ I    L    P + PN
Sbjct:   30 LQDFCIG----VNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFPENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNP--GVIIIGNTLFGSKPPIDPN 202          
BLAST of EY679145 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.267e-22
Identity = 60/139 (43.17%), Postives = 79/139 (56.83%), Query Frame = 1
Query:   85 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFGVSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAGGG--YVKTLKKGDIMIFPQGLLHFQVISG 489
            + DFCVA  D K      G  C  P    A+DF  SGL  AG T + + + VT   V Q P +N LG+SL R+D A  G  P HTHP A+EIL++V G +  GF+SS+      + K L  GD+ +FP G++HFQV  G
Sbjct:   27 LQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIG 165          
BLAST of EY679145 vs. ExPASy Swiss-Prot
Match: GL117_ARATH (Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.267e-22
Identity = 60/139 (43.17%), Postives = 79/139 (56.83%), Query Frame = 1
Query:   85 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFGVSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAGGG--YVKTLKKGDIMIFPQGLLHFQVISG 489
            + DFCVA  D K      G  C  P    A+DF  SGL  AG T + + + VT   V Q P +N LG+SL R+D A  G  P HTHP A+EIL++V G +  GF+SS+      + K L  GD+ +FP G++HFQV  G
Sbjct:   27 LQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIG 165          
BLAST of EY679145 vs. ExPASy Swiss-Prot
Match: GL115_ARATH (Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.267e-22
Identity = 60/139 (43.17%), Postives = 79/139 (56.83%), Query Frame = 1
Query:   85 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFGVSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAGGG--YVKTLKKGDIMIFPQGLLHFQVISG 489
            + DFCVA  D K      G  C  P    A+DF  SGL  AG T + + + VT   V Q P +N LG+SL R+D A  G  P HTHP A+EIL++V G +  GF+SS+      + K L  GD+ +FP G++HFQV  G
Sbjct:   27 LQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIG 165          
BLAST of EY679145 vs. ExPASy Swiss-Prot
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.492e-22
Identity = 58/136 (42.65%), Postives = 80/136 (58.82%), Query Frame = 1
Query:   82 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFGVSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAGGGYVKTLKKGDIMIFPQGLLHFQVISG 489
            M+ D CVADL       G+PC      TA DF    +   G T +   + VT A V Q P +N LG+SLAR+D A GG+ P HTHP ASE++ V+ G +  GFI ++A     K + KG++ +FP+GL+HFQ  +G
Sbjct:   37 MLQDVCVADLHSKVKVNGFPC--KTNFTAADFSSFAISKPGATNNKFGSKVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFI-TTANVLVSKQITKGEVFVFPRGLVHFQKNNG 169          
BLAST of EY679145 vs. ExPASy Swiss-Prot
Match: GLT1_ARATH (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 9.492e-22
Identity = 56/131 (42.75%), Postives = 80/131 (61.07%), Query Frame = 1
Query:   85 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFGVSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAGGGYVKTLKKGDIMIFPQGLLHFQ 477
            + DFCV DLK S S  G+PC   + V+A DF  SGLG   +T++     V PA V  FP +N LG+S+  ++LA GGV P H HP A+E+  V+ G +  GF+S++    + K L  G+  + P+GL+HFQ
Sbjct:   33 LQDFCVGDLKASASINGFPC--KSAVSASDFFYSGLGGPLDTSNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPRATEVGTVIEGSVFVGFLSTN-NTLFSKVLNAGEAFVIPRGLVHFQ 160          
BLAST of EY679145 vs. ExPASy Swiss-Prot
Match: GL88_ORYSJ (Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.492e-22
Identity = 55/132 (41.67%), Postives = 78/132 (59.09%), Query Frame = 1
Query:   85 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFGVSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAGGG-YVKTLKKGDIMIFPQGLLHFQ 477
            + DFCVAD        G+ C+ P  VTAD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+     + K L KGD+ +FP+GL+HFQ
Sbjct:   28 LQDFCVADKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQ 159          
BLAST of EY679145 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.240e-21
Identity = 58/136 (42.65%), Postives = 80/136 (58.82%), Query Frame = 1
Query:   82 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFGVSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAGGGYVKTLKKGDIMIFPQGLLHFQVISG 489
            M+ D CVADL       G+PC      TA DF    +   G T +   + VT A V Q P +N LG+SLAR+D A GG+ P HTHP ASE++ V+ G +  GFI ++A     K + KG++ +FP+GL+HFQ  +G
Sbjct:   37 MLQDVCVADLHSKVKVNGFPC--KTNFTAADFSSLAISKPGATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFI-TTANVLVSKKIIKGEVFVFPRGLVHFQKNNG 169          
BLAST of EY679145 vs. ExPASy Swiss-Prot
Match: GL810_ORYSJ (Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.240e-21
Identity = 54/132 (40.91%), Postives = 78/132 (59.09%), Query Frame = 1
Query:   85 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFGVSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAGGG-YVKTLKKGDIMIFPQGLLHFQ 477
            + DFCVAD+       G+ C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+     + K L KGD+ +FP+GL+HFQ
Sbjct:   28 LQDFCVADMHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQ 159          
BLAST of EY679145 vs. ExPASy Swiss-Prot
Match: GL14_ORYSJ (Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.240e-21
Identity = 59/142 (41.55%), Postives = 83/142 (58.45%), Query Frame = 1
Query:   82 MVNDFCVADLKLSDSPA---GYPCVPPAMVTADDFGVSGLGVAGNTTS--IINAAVTPAFVAQFPAVNGLGLSLARLDLAK-GGVIPIHTHPAASEILLVVHGCITAGFISSSAGGG----YVKTLKKGDIMIFPQGLLHFQ 477
            M+ D CVAD K    P    G+PC P A VTA+DF   GLG   +  S   + +AVT A V + P +N LG+S+AR+D A  GG  P H+HP A+EIL V  G +  GF+ ++A         + + KG + +FP+GLLH++
Sbjct:   32 MLQDICVADYKSLQGPLRVNGFPCKPEANVTAEDFFFPGLGKPADVYSGNPMGSAVTAATVERIPGLNTLGVSMARVDYAPWGGANPPHSHPRATEILFVADGLLEVGFVVATAAPASSRLITRVVPKGGVFVFPRGLLHYE 173          
The following BLAST results are available for this feature:
BLAST of EY679145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL112_ARATH5.564e-2241.34Putative germin-like protein subfamily 1 member 12... [more]
GL119_ARATH7.267e-2243.17Germin-like protein subfamily 1 member 19 OS=Arabi... [more]
GL117_ARATH7.267e-2243.17Germin-like protein subfamily 1 member 17 OS=Arabi... [more]
GL115_ARATH7.267e-2243.17Germin-like protein subfamily 1 member 15 OS=Arabi... [more]
NEC1_NICPL9.492e-2242.65Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE... [more]
GLT1_ARATH9.492e-2242.75Germin-like protein subfamily T member 1 OS=Arabid... [more]
GL88_ORYSJ9.492e-2241.67Germin-like protein 8-8 OS=Oryza sativa subsp. jap... [more]
NEC1_NICLS1.240e-2142.65Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
GL810_ORYSJ1.240e-2140.91Germin-like protein 8-10 OS=Oryza sativa subsp. ja... [more]
GL14_ORYSJ1.240e-2141.55Germin-like protein 1-4 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-055-G03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679145 ID=EY679145; Name=EY679145; organism=Citrus sinensis; type=EST; length=903bp
AAATAACTACACTAAATATTAGTCAAAATGCTTCACATTCTCTTCTTCTT
CCTTGCTTTCGTATCCTCTTCCTCCAATGCTATGGTTAACGACTTCTGCG
TCGCTGACCTAAAGCTGTCGGATAGTCCCGCCGGCTATCCTTGCGTGCCC
CCCGCTATGGTTACCGCTGACGACTTCGGGGTTTCGGGCCTCGGCGTGGC
CGGAAACACCACGAGCATTATCAACGCGGCAGTGACACCTGCATTTGTAG
CTCAATTTCCGGCCGTGAATGGGCTCGGACTCTCCTTGGCACGCCTAGAT
CTTGCAAAGGGTGGCGTAATCCCAATCCACACTCATCCAGCTGCTTCCGA
AATCCTTCTTGTTGTGCATGGCTGCATAACTGCCGGGTTCATTTCCTCTT
CAGCTGGGGGGGGTTACGTAAAGACGCTTAAGAAGGGAGATATCATGATC
TTTCCACAAGGGTTGTTGCATTTTCAAGTAATTTCGGGGGGCGGACGGAG
CCCTCGGTTTTGTTTACCTTCAGCGGCCCCAATCCTGGGACTCCAAATCA
CCGATTTTCGCCTTATTTGCGTAACACCTTGTCTTTCCCCAAATTGGGGG
GGGAAGCAAACCCCTTTCCCTTGAACAATCTACGGGGGAAAAAGGGTCGA
GGGTATCCGTGGGGGGGACCCGGGTAAGGCTTATTTAAATAGACCAACAT
TCCTCCTTTGGAGGGTTTGGGGGTTCTTAATTCTAAATTTGAGTGGGCAA
GGGGGTGTGTGGGGGGGTGGGAAGGCCAAGGAGGAAGGATTTTGTCGGGG
GTCCAGCATTCCCCCGAAACTTTTTTGATGGGGGAGAGAGAGGAAGTTGT
TTGCCCCGTTGAAGGACCGTGATAAAGGGGAGGAGAGGAGGAGGAAAGGA
AAC
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