EY744602
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744602 vs. ExPASy Swiss-Prot
Match: RL13A_BOVIN (60S ribosomal protein L13a OS=Bos taurus GN=RPL13A PE=2 SV=3) HSP 1 Score: 214.542 bits (545), Expect = 7.361e-55 Identity = 102/183 (55.74%), Postives = 133/183 (72.68%), Query Frame = 3 Query: 66 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLESEVGWNYYDTIRELEKSRQERSQVAYERKKQLHKLRAKAEKGAKKKL 614 +V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG R K+KY+ FLRKRMNT PS GP HFRAP++IFWRTVRGM+PHKT ++G+P PYDK KRMV+P ALKV+RL+ K+ LGRL EVGW Y LE+ R+E++++ Y +KKQL +LR +AEK +KK+ Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNIEKKI 189
BLAST of EY744602 vs. ExPASy Swiss-Prot
Match: RL13A_RAT (60S ribosomal protein L13a OS=Rattus norvegicus GN=Rpl13a PE=1 SV=2) HSP 1 Score: 213.386 bits (542), Expect = 1.640e-54 Identity = 102/183 (55.74%), Postives = 132/183 (72.13%), Query Frame = 3 Query: 66 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLESEVGWNYYDTIRELEKSRQERSQVAYERKKQLHKLRAKAEKGAKKKL 614 +V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG R K+KY+ FLRKRMNT PS GP HFRAP++IFWRTVRGM+PHKT +G+P PYDK KRMV+P ALKV+RL+ K+ LGRL EVGW Y LE+ R+E++++ Y +KKQL +LR +AEK +KK+ Sbjct: 7 LVLDGRSHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLLRLRKQAEKNVEKKI 189
BLAST of EY744602 vs. ExPASy Swiss-Prot
Match: RL13A_MOUSE (60S ribosomal protein L13a OS=Mus musculus GN=Rpl13a PE=1 SV=4) HSP 1 Score: 211.46 bits (537), Expect = 6.232e-54 Identity = 101/183 (55.19%), Postives = 132/183 (72.13%), Query Frame = 3 Query: 66 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLESEVGWNYYDTIRELEKSRQERSQVAYERKKQLHKLRAKAEKGAKKKL 614 +V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG R K+KY+ FLRKRMNT PS GP HFRAP++IFWRTVRGM+PHKT +G+P PYDK KRMV+P ALKV+RL+ K+ LGRL EVGW Y LE+ R+E++++ Y +KKQ+ +LR +AEK +KK+ Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKMHYRKKKQILRLRKQAEKNVEKKI 189
BLAST of EY744602 vs. ExPASy Swiss-Prot
Match: RL16_NEUCR (60S ribosomal protein L16 OS=Neurospora crassa GN=rpl-16 PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 4.180e-50 Identity = 97/181 (53.59%), Postives = 125/181 (69.06%), Query Frame = 3 Query: 66 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHG-PIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLESEVGWNYYDTIRELEKSRQERSQVAYERKKQLHKLRAKAEKGAK 605 VV+D + H+LGRLASIVAK+LLNGQK+V VRCE + +SG R K+KY +LRK P+ G P HFRAP++IF++ VRGMIPHKT +EGVP PYDK K+MV+P AL+VLRLQ G K+C +GRL SEVGW Y D + LE+ R+ + YERKK + ++A+K AK Sbjct: 8 VVIDGKGHLLGRLASIVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHSYLRKMTRYNPTRGGPFHFRAPSRIFYKAVRGMIPHKTARGAAALERLKVFEGVPPPYDKKKKMVVPQALRVLRLQPGRKFCTVGRLSSEVGWKYEDVVSRLEERRKAKGAAYYERKKVAARQLSEAKKSAK 188
BLAST of EY744602 vs. ExPASy Swiss-Prot
Match: RL13A_SALTR (60S ribosomal protein L13a (Fragment) OS=Salmo trutta GN=rpl13a PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.709e-49 Identity = 95/175 (54.29%), Postives = 121/175 (69.14%), Query Frame = 3 Query: 90 MLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLESEVGWNYYDTIRELEKSRQERSQVAYERKKQLHKLRAKAEKGAKKKL 614 +LGRLA+IVA E+L G KVV VRCE I +SG R K+KY+ FLRKRMNT PS GP HFRAP++IFWRTVRGM+PHKT ++GVP PYDK KRMV+P ALK++RL+ K+ LLGRL EVGW Y LE+ R+E++++ Y +KK + KL AEK + + Sbjct: 1 LLGRLAAIVANEVLLGHKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGVPPPYDKRKRMVVPAALKIVRLKPTRKFALLGRLAHEVGWKYQAITATLEEKRKEKAKIRYAKKKTVTKLSKLAEKNVESTI 175
BLAST of EY744602 vs. ExPASy Swiss-Prot
Match: RL13A_DROME (60S ribosomal protein L13a OS=Drosophila melanogaster GN=RpL13A PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.709e-49 Identity = 90/188 (47.87%), Postives = 128/188 (68.09%), Query Frame = 3 Query: 45 SGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLESEVGWNYYDTIRELEKSRQERSQVAYERKKQLHKLRAKAEKGAKK 608 +G+ + VV+D R H+LGRLAS+VAK LL G KV VRCEE+ +SG R K+K++ +LRKR N P+ GP HFRAP++IF++ VRGMIPHKT ++G+P+PYDK +R+V+P A++VL L+ KYC +GRL EVGW+Y D I+ LE+ R+ + +V + ++L KL KA + K Sbjct: 2 TGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVVPIAMRVLTLRSDRKYCQVGRLSHEVGWHYQDVIKSLERKRKAKLRVTLKHNRELKKLTVKARENIAK 189
BLAST of EY744602 vs. ExPASy Swiss-Prot
Match: RL13A_SPOFR (60S ribosomal protein L13a OS=Spodoptera frugiperda GN=RpL13A PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 7.883e-49 Identity = 96/189 (50.79%), Postives = 124/189 (65.61%), Query Frame = 3 Query: 45 SGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLESEVGWNYYDTIRELEKSRQERS--QVAYERKKQLHKLRAKAEKGAK 605 +G K +V+D R H+LGRLA+++AK LL G KVV VRCE+I +SG R K+K+M FLRKR N P+ GP HFRAP+KI W+TVRGMIPHKT Y+G P PYD +R+V+P AL+V L+ G KYC +GRL EVGW Y D +R+LE R+ +S +AYE+K + R E G K Sbjct: 2 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKSALRRLRAYDGCPPPYDNRRRVVVPAALRVFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLENKRKVKSVKLMAYEKKLK----RITKESGEK 186
BLAST of EY744602 vs. ExPASy Swiss-Prot
Match: RL13A_CHOPR (60S ribosomal protein L13a OS=Choristoneura parallela GN=RpL13A PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.756e-48 Identity = 91/174 (52.30%), Postives = 120/174 (68.97%), Query Frame = 3 Query: 45 SGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLESEVGWNYYDTIRELEKSRQERS--QVAYERK 560 +G K +V+D R H+LGRLA+++AK LL G KVV VRCE++ +SG R K+K+M FLRKR N P+ GP HFRAP+KI W+TVRGMIPHKT Y+G P PYD +R+V+P AL+V L+ G KYC +GRL EVGW Y + +R+LE R+ ++ +VAYERK Sbjct: 2 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQLNISGNFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKDALRRLRSYDGCPPPYDNRRRVVVPAALRVFCLKPGRKYCHVGRLSHEVGWKYREVVRKLEDKRKFKAVHKVAYERK 175
BLAST of EY744602 vs. ExPASy Swiss-Prot
Match: RL16A_SCHPO (60S ribosomal protein L16-A OS=Schizosaccharomyces pombe GN=rpl16a PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.912e-48 Identity = 97/187 (51.87%), Postives = 124/187 (66.31%), Query Frame = 3 Query: 60 KRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLESEVGWNYYDTIRELEKSRQERSQVAYERK--KQLHKLRAKAEKGAKKKL 614 K VV+DA+ H+LGRLAS+VAK+LL GQKVV VRCEE+ +SG R K+KY+ +LRK PS G HFRAP++IF + VRGM+PHKT EG+P P+DK KR+V+P AL+VLRL+ G KYC +GRL SEVGW Y D + +LE+ R+ +S Y+ K KQ AKA KL Sbjct: 6 KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRYNPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAALRVLRLKPGRKYCTVGRLSSEVGWKYSDIVSKLEERRKVKSAAFYQAKLAKQKKIASAKAASSVNGKL 192
BLAST of EY744602 vs. ExPASy Swiss-Prot
Match: RL13A_CAEEL (60S ribosomal protein L13a OS=Caenorhabditis elegans GN=rpl-16 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.912e-48 Identity = 92/189 (48.68%), Postives = 124/189 (65.61%), Query Frame = 3 Query: 48 GICAKRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLESEVGWNYYDTIRELEKSRQERSQVAYERKKQLHKLRAKAEKGAKKKL 614 G+ + +++D ++H+LGRLASIVAK+LL G KVV +R EEI +SG R K+KYM FLRKR N P+ G H+RAP KIFWRTVRGM+PHKT YEGVPA Y K K + P A + RLQ K+C++GRL EVGW + D + +LE R+ + +E+KK++ KL +A+K A K+ Sbjct: 2 GLSNRAIIIDGKNHLLGRLASIVAKKLLQGDKVVVLRAEEIVISGNFHRSKLKYMSFLRKRCNINPARGAFHYRAPGKIFWRTVRGMLPHKTNRGNEALKNLRAYEGVPAKYQKTKSLHAPSASR-FRLQPRRKFCVVGRLSHEVGWQFQDVVAKLEAKRKVKGAAYFEQKKKMDKLAVQAKKNAAPKI 189 The following BLAST results are available for this feature:
BLAST of EY744602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744602 ID=EY744602; Name=EY744602; organism=Citrus sinensis; type=EST; length=983bpback to top |