EY744600

Overview
NameEY744600
Unique NameEY744600
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length969
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744600 vs. ExPASy Swiss-Prot
Match: GLPF_ECO57 (Glycerol uptake facilitator protein OS=Escherichia coli O157:H7 GN=glpF PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.393e-12
Identity = 53/186 (28.49%), Postives = 82/186 (44.09%), Query Frame = 1
Query:   34 LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH----------------EYNSLGGGANTVASGY-NKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHW 540
            + + W  G  + + +Y TAG+SG H+NPAVT  L+L       + + ++V+Q  GA C   LV     +                E   L G  +T  + + N   A   E++ T +L+  + + TD            LAPL IG  + ++  +  P+TG  +NPAR FG  V      AW   W
Sbjct:   44 ISVIWGLG--VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRG---PLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGW 219          
BLAST of EY744600 vs. ExPASy Swiss-Prot
Match: NIP41_ARATH (Putative aquaporin NIP4-1 OS=Arabidopsis thaliana GN=NIP4-1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.788e-12
Identity = 50/180 (27.78%), Postives = 83/180 (46.11%), Query Frame = 1
Query:   19 GGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 558
            G +   GI   +G ++ V++Y T  ISG H NPAVT    + R+    +   Y+ AQ  G++     ++   K    +  G         +   AL AEII +F+L++ +       R+     V  LA + +G  + +      PI+G  +NPARS G A++      +   W++ VGP
Sbjct:   71 GTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWHQVPLYIGAQFAGSLLASLTLRLMFKVTPEAFFG----TTPADSPARALVAEIIISFLLMFVISGVATDNRA-----VGELAGIAVGMTIMVNVFVAGPISGASMNPARSLGPALVMG---VYKHIWVYIVGP 238          
BLAST of EY744600 vs. ExPASy Swiss-Prot
Match: NIP31_ORYSJ (Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica GN=NIP3-1 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.788e-12
Identity = 53/180 (29.44%), Postives = 79/180 (43.89%), Query Frame = 1
Query:   19 GGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 558
            G +   G A   G  +  ++  T  ISG H+NP++T      R    ++  AY+  Q LG+IC  G     + H +  L GG        +   A   E I TF L++ V +     R+     V  LA + +G AV +  L   P TG  +NP R+ G AV   N   +   WI+ + P
Sbjct:  111 GAISPFGNAACAGLAVTTIILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQVLGSIC-AGFALKGVFHPF--LSGGVTVPDPTISTAQAFFTEFIITFNLLFVVTAVATDTRA-----VGELAGIAVGAAVTLNILIAGPTTGGSMNPVRTLGPAVAAGN---YRQLWIYLIAP 279          
BLAST of EY744600 vs. ExPASy Swiss-Prot
Match: YFF4_YEAST (Uncharacterized membrane protein YFL054C OS=Saccharomyces cerevisiae GN=YFL054C PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.560e-12
Identity = 66/204 (32.35%), Postives = 86/204 (42.16%), Query Frame = 1
Query:   19 GGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGAN--TVASG----------YNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPV---LAPLPIGFAVFMVHLATIPITGTGINPARSFG----AAVIYNNDKA-----WDDHWIFWVGP 558
            G    L  AW FG M+ V  Y   GISGGHINPAVT  + + RK    +   Y+VAQ +GA  G  +   +         GG +  T A+G              +A   E IG  +LV  + +  D      DS+ P    +  L IGF V  + +A    T   INPAR  G    A++I     A     W   W  W GP
Sbjct:  379 GSYESLSFAWGFGCMLGV--YVAGGISGGHINPAVTISMAIFRKFPWKKVPVYIVAQIIGAYFGGAMAYGYFWSSITEFEGGPHIRTTATGACLFTDPKSYVTWRNAFFDEFIGASILVGCLMALLD------DSNAPPGNGMTALIIGFLVAAIGMALGYQTSFTINPARDLGPRIFASMIGYGPHAFHLTHWWWTWGAWGGP 574          
BLAST of EY744600 vs. ExPASy Swiss-Prot
Match: GLPF_THEMA (Probable glycerol uptake facilitator protein OS=Thermotoga maritima GN=glpF PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.873e-12
Identity = 60/190 (31.58%), Postives = 83/190 (43.68%), Query Frame = 1
Query:   28 GLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLV-KAFMKHEYNSLGGGAN-----TVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIY-------NNDKAWDDHWIFWVGP 558
            G + I   +G  + + VY    ISG HINPAVT GL    +    +   Y+ +Q LGA  G  LV   ++ H   +    A      T  +    G+ L  EIIGT VL+  V      K +        L PL +GF V+ + L+    TG  INPAR FG  + +         D  W   W+  +GP
Sbjct:   36 GWIVITTGWGLAVAMSVYLVGRISGAHINPAVTIGLAFIGQFPWSKVPGYIFSQILGAFVGAILVYLTYLPHWKETDDPDAKLAVFCTGPAVRKYGANLLTEIIGTMVLLMGVLGIGANKLA------DGLNPLLVGFLVWSIGLSLGGPTGYAINPARDFGPRLAHAILPIPGKRDSDWSYSWVPIIGP 219          
BLAST of EY744600 vs. ExPASy Swiss-Prot
Match: GLPF_PSEAE (Glycerol uptake facilitator protein OS=Pseudomonas aeruginosa GN=glpF PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.873e-12
Identity = 52/175 (29.71%), Postives = 82/175 (46.86%), Query Frame = 1
Query:   22 GVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLV-----KAFMKHE--YNSLGGGANTVA----------SGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFG 495
            G+  + I W  G  + + +Y +AG+SG H+NPAV+  L+L       +   Y+ AQ  GA C   LV       F++ E   N + G  +++A             + G A   E++ T +L+  + + TD            LAPL IG  + ++  A  P+TG  +NPAR FG
Sbjct:   43 GLWEISIIWGVG--VSMAIYLSAGVSGAHLNPAVSIALWLFAGFEGRKLPFYITAQVAGAFCAAALVYTLYSSLFIEFEQAQNIVRGSQDSLALASVFSTYPHPALSVGQAFLVEVVITAILMAVIMALTDDGNGLPRG---PLAPLLIGLLIAVIGSAMGPLTGFAMNPARDFG 212          
BLAST of EY744600 vs. ExPASy Swiss-Prot
Match: NIP12_ORYSJ (Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica GN=NIP1-2 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.684e-11
Identity = 54/187 (28.88%), Postives = 84/187 (44.92%), Query Frame = 1
Query:   19 GGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGA-------NTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 558
            G V   GI   +G ++ VLVY  + ISG H NPAVT       +    +  +Y+VAQ LG+     +    ++  +   GGGA        T  +G +   A   E + +F L++ V       R+     +  LA L +G  V +  L   P+TG  +NPARS G A++      +   W++   P
Sbjct:   92 GAVTFPGICAVWGLVVMVLVYTVSHISGAHFNPAVTVAFATCGRFRWKQVPSYVVAQVLGST----MASLTLRVVFGGGGGGARGEHLFFGTTPAG-SMAQAAALEFVISFFLMFVVSGVATDNRA-----IGELAGLAVGATVAVNVLFAGPVTGASMNPARSLGPAMVAGR---YGGVWVYVAAP 265          
BLAST of EY744600 vs. ExPASy Swiss-Prot
Match: GLPF_STRR6 (Glycerol uptake facilitator protein OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=glpF PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.200e-11
Identity = 56/191 (29.32%), Postives = 88/191 (46.07%), Query Frame = 1
Query:   28 GLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSA-------LGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN-------NDKAWDDHWIFWVGP 558
            G + I   +G  + V V+ +  +S  H+NPAVT G+ L   +     + Y++AQ  GA+ G  LV    K  Y +     N +A+ ++ G A       L +EI+GTFVLV T+F+       A       +    +G  +  + L+    TG  +NPAR  G  ++++        D  W   WI  VGP
Sbjct:   37 GWIVITMGWGIAVAVAVFVSGKLSPAHLNPAVTIGVALKGGLPWASVLPYILAQFAGAMLGQILVWLQFKPHYEAEENAGNILAT-FSTGPAIKDTVSNLISEILGTFVLVLTIFALGLYDFQAG------IGTFAVGTLIVGIGLSLGGTTGYALNPARDLGPRIMHSILPIPNKGDGDWSYAWIPVVGP 220          
BLAST of EY744600 vs. ExPASy Swiss-Prot
Match: NIP31_MAIZE (Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.752e-11
Identity = 50/180 (27.78%), Postives = 79/180 (43.89%), Query Frame = 1
Query:   19 GGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 558
            G +   G A   G  +  ++  T  ISG H+NP++T      R    ++  AY+  Q L ++C    +K    H +  L GG     +  +   A   E I +F L++ V +     R+     V  LA + +G AV +  L   P TG  +NP R+ G AV   N   +   WI+ + P
Sbjct:  102 GAISPFGNAACAGLAVATVILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQALASVCAAFALKGVF-HPF--LSGGVTVPDATVSTAQAFFTEFIISFNLLFVVTAVATDTRA-----VGELAGIAVGAAVTLNILVAGPTTGGSMNPVRTLGPAVAAGN---YRQLWIYLLAP 270          
BLAST of EY744600 vs. ExPASy Swiss-Prot
Match: NIP32_ORYSJ (Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica GN=NIP3-2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.400e-11
Identity = 54/163 (33.13%), Postives = 78/163 (47.85%), Query Frame = 1
Query:   19 GGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAV 504
            G   LLGIA + G  + VLV     ISG H+NPAV+  + +   +     + Y+ AQ LG+I     VK      Y+ +  G  TV        A   E + TFVL++ + + ATDP      + V  L  + +G  + M  L   P TG  +NPAR+ G A+
Sbjct:  123 GVESLLGIATSAGLAVTVLVLSLIHISGCHLNPAVSIAMTVFGHLPPAHLLPYIAAQILGSITASFAVKGM----YHPVNPGIVTVPK-VGTVEAFFLEFVTTFVLLFIITALATDP------NAVKELIAVAVGATIMMNALVAGPSTGASMNPARTLGPAI 274          
The following BLAST results are available for this feature:
BLAST of EY744600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
GLPF_ECO573.393e-1228.49Glycerol uptake facilitator protein OS=Escherichia... [more]
NIP41_ARATH5.788e-1227.78Putative aquaporin NIP4-1 OS=Arabidopsis thaliana ... [more]
NIP31_ORYSJ5.788e-1229.44Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica G... [more]
YFF4_YEAST7.560e-1232.35Uncharacterized membrane protein YFL054C OS=Saccha... [more]
GLPF_THEMA9.873e-1231.58Probable glycerol uptake facilitator protein OS=Th... [more]
GLPF_PSEAE9.873e-1229.71Glycerol uptake facilitator protein OS=Pseudomonas... [more]
NIP12_ORYSJ1.684e-1128.88Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica G... [more]
GLPF_STRR62.200e-1129.32Glycerol uptake facilitator protein OS=Streptococc... [more]
NIP31_MAIZE3.752e-1127.78Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1[more]
NIP32_ORYSJ6.400e-1133.13Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-002-D08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744600 ID=EY744600; Name=EY744600; organism=Citrus sinensis; type=EST; length=969bp
CCACGCGTCCGTGCCTGTGGTGGTGTCGGCCTTTTGGGTATTGCATGGGC
CTTTGGTGGCATGATCTTCGTCCTTGTTTACTGTACCGCTGGCATTTCTG
GTGGTCACATTAACCCTGCTGTGACGTTTGGGCTGTTCTTGGCAAGGAAG
GTATCATTGATCAGGGCTGTGGCTTACATGGTGGCTCAGTGCTTGGGTGC
CATTTGCGGTGTTGGTTTGGTCAAGGCCTTCATGAAGCATGAGTACAACT
CACTTGGTGGTGGTGCTAACACTGTGGCTTCTGGCTACAACAAAGGATCA
GCCTTGGGTGCTGAGATTATTGGTACCTTCGTGCTTGTTTACACAGTCTT
CTCGGCCACAGACCCCAAGAGAAGCGCTCGTGACTCTCACGTGCCCGTTT
TGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTTCACTTGGCCACC
ATCCCCATCACTGGAACGGGCATCAACCCTGCTAGGAGCTTTGGTGCTGC
TGTTATCTACAACAATGACAAGGCCTGGGATGACCATTGGATCTTCTGGG
TTGGTCCTTTCTTTGGAGCATTTGCTGCAGCGGCATACCACCAATCTTCT
TGAAGGCTGCTGCTATCAAGGCTTTGGGATTCTTTCCCCACAACCCTTCC
AACTTAGAAAGCAAAATAATGAAGAATATGAAACACCAACCAAAAAAACT
TTATTTAACCCCTTTTACCTTTACCCCCTTCTGGTATTTTGACCCCTTGG
GTATAATAGAAAAAGAATGTTTTGCAAAAAAAATATCCAACCCCTTCCCT
TTTTTTTCCCCTTCTTCATTCTTCTGAGGGAGGAACTTATAAAAAAAAAA
AAAAAAAAAAAAAAAAAGGGGGGCGCCCCCCCCCCCACAAAAAAAGCTCC
AAAGTTTAACTAGCACGACTGAGGAACAAGGAACATCCAAAAAACATCTC
TCTATTCTATATAGGAGAC
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