EY744562

Overview
NameEY744562
Unique NameEY744562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length519
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744562 vs. ExPASy Swiss-Prot
Match: RL3L_HUMAN (60S ribosomal protein L3-like OS=Homo sapiens GN=RPL3L PE=1 SV=3)

HSP 1 Score: 122.094 bits (305), Expect = 1.542e-27
Identity = 56/89 (62.92%), Postives = 70/89 (78.65%), Query Frame = 3
Query:   15 TEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 281
            T +D T K ITP+GGFPHYG V +D++M+KGC  G KKRV+TLR+SLL   SR A+E I++KFIDT+SKFGHGRFQT QEK+ + G  K
Sbjct:  305 TSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 393          
BLAST of EY744562 vs. ExPASy Swiss-Prot
Match: RL3_ENCCU (60S ribosomal protein L3 OS=Encephalitozoon cuniculi GN=RPL3-1 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.014e-27
Identity = 59/90 (65.56%), Postives = 73/90 (81.11%), Query Frame = 3
Query:   15 TEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMKA 284
            TEFD TEK I+PMGGFPHYG V++D++M+KG  VG +KRVVTLR+SLL+Q    A EE+ IKF+DTSSK GHGRFQT+ EK+ +YG  KA
Sbjct:  290 TEFDLTEKPISPMGGFPHYGEVRNDFIMVKGAVVGARKRVVTLRKSLLRQR---AGEELVIKFVDTSSKIGHGRFQTSAEKKAFYGARKA 376          
BLAST of EY744562 vs. ExPASy Swiss-Prot
Match: RL3_RAT (60S ribosomal protein L3 OS=Rattus norvegicus GN=Rpl3 PE=1 SV=3)

HSP 1 Score: 121.324 bits (303), Expect = 2.631e-27
Identity = 55/89 (61.80%), Postives = 73/89 (82.02%), Query Frame = 3
Query:   15 TEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 281
            T++D ++K I P+GGF HYG V +D++M+KGC VG KKRV+TLR+SLL QT R ALE+I +KFIDT+SKFGHGRFQT +EK+ + G +K
Sbjct:  305 TDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393          
BLAST of EY744562 vs. ExPASy Swiss-Prot
Match: RL3_MOUSE (60S ribosomal protein L3 OS=Mus musculus GN=Rpl3 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 2.631e-27
Identity = 55/89 (61.80%), Postives = 73/89 (82.02%), Query Frame = 3
Query:   15 TEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 281
            T++D ++K I P+GGF HYG V +D++M+KGC VG KKRV+TLR+SLL QT R ALE+I +KFIDT+SKFGHGRFQT +EK+ + G +K
Sbjct:  305 TDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393          
BLAST of EY744562 vs. ExPASy Swiss-Prot
Match: RL3_BOVIN (60S ribosomal protein L3 OS=Bos taurus GN=RPL3 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 2.631e-27
Identity = 55/89 (61.80%), Postives = 73/89 (82.02%), Query Frame = 3
Query:   15 TEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 281
            T++D ++K I P+GGF HYG V +D++M+KGC VG KKRV+TLR+SLL QT R ALE+I +KFIDT+SKFGHGRFQT +EK+ + G +K
Sbjct:  305 TDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393          
BLAST of EY744562 vs. ExPASy Swiss-Prot
Match: RL3_MACFA (60S ribosomal protein L3 OS=Macaca fascicularis GN=RPL3 PE=2 SV=3)

HSP 1 Score: 120.939 bits (302), Expect = 3.436e-27
Identity = 55/89 (61.80%), Postives = 73/89 (82.02%), Query Frame = 3
Query:   15 TEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 281
            T++D ++K I P+GGF HYG V +D++M+KGC VG KKRV+TLR+SLL QT R ALE+I +KFIDT+SKFGHGRFQT +EK+ + G +K
Sbjct:  305 TDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393          
BLAST of EY744562 vs. ExPASy Swiss-Prot
Match: RL3_HUMAN (60S ribosomal protein L3 OS=Homo sapiens GN=RPL3 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 3.436e-27
Identity = 55/89 (61.80%), Postives = 73/89 (82.02%), Query Frame = 3
Query:   15 TEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 281
            T++D ++K I P+GGF HYG V +D++M+KGC VG KKRV+TLR+SLL QT R ALE+I +KFIDT+SKFGHGRFQT +EK+ + G +K
Sbjct:  305 TDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393          
BLAST of EY744562 vs. ExPASy Swiss-Prot
Match: RL3_ASHGO (60S ribosomal protein L3 OS=Ashbya gossypii GN=RPL3 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.227e-26
Identity = 56/89 (62.92%), Postives = 69/89 (77.53%), Query Frame = 3
Query:   15 TEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 281
            TEFDRT+K ITPMGGF HYG V +D++M+KG   G +KRVVTLR+SL   TSR ALEE+ +K+IDT+SKFG GRFQT  EK  + G +K
Sbjct:  297 TEFDRTKKTITPMGGFVHYGAVNNDFVMVKGSIPGTRKRVVTLRKSLYTSTSRRALEEVNLKWIDTASKFGKGRFQTPAEKHAFMGTLK 385          
BLAST of EY744562 vs. ExPASy Swiss-Prot
Match: RL3_KLULA (60S ribosomal protein L3 OS=Kluyveromyces lactis GN=RPL3 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.444e-25
Identity = 54/89 (60.67%), Postives = 69/89 (77.53%), Query Frame = 3
Query:   15 TEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 281
            TEFDRT+K ITPMGGF HYG + +D++++KG   G +KRVVTLR+SL   TSR ALEE+ +K+IDT+SKFG GRFQT  EK  + G +K
Sbjct:  296 TEFDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKWIDTASKFGKGRFQTPAEKHAFLGTLK 384          
BLAST of EY744562 vs. ExPASy Swiss-Prot
Match: RL3B_SCHPO (60S ribosomal protein L3-B OS=Schizosaccharomyces pombe GN=rpl3b PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 1.885e-25
Identity = 53/89 (59.55%), Postives = 70/89 (78.65%), Query Frame = 3
Query:   15 TEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 281
            T+FD TEK ITPMGGF  YG+V++D++M+ G   GP KRV+TLR+SLL  TSR ALE + +K+IDT+SKFGHGRFQT  E +++ G +K
Sbjct:  296 TDFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFLGTLK 384          
The following BLAST results are available for this feature:
BLAST of EY744562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
RL3L_HUMAN1.542e-2762.9260S ribosomal protein L3-like OS=Homo sapiens GN=R... [more]
RL3_ENCCU2.014e-2765.5660S ribosomal protein L3 OS=Encephalitozoon cunicu... [more]
RL3_RAT2.631e-2761.8060S ribosomal protein L3 OS=Rattus norvegicus GN=R... [more]
RL3_MOUSE2.631e-2761.8060S ribosomal protein L3 OS=Mus musculus GN=Rpl3 P... [more]
RL3_BOVIN2.631e-2761.8060S ribosomal protein L3 OS=Bos taurus GN=RPL3 PE=... [more]
RL3_MACFA3.436e-2761.8060S ribosomal protein L3 OS=Macaca fascicularis GN... [more]
RL3_HUMAN3.436e-2761.8060S ribosomal protein L3 OS=Homo sapiens GN=RPL3 P... [more]
RL3_ASHGO2.227e-2662.9260S ribosomal protein L3 OS=Ashbya gossypii GN=RPL... [more]
RL3_KLULA1.444e-2560.6760S ribosomal protein L3 OS=Kluyveromyces lactis G... [more]
RL3B_SCHPO1.885e-2559.5560S ribosomal protein L3-B OS=Schizosaccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-002-A03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744562 ID=EY744562; Name=EY744562; organism=Citrus sinensis; type=EST; length=519bp
CTCACACTGGCATAACTGAATTTGACAGGACTGAGAAGGACATTACCCCA
ATGGGTGGCTTTCCTCACTATGGTATTGTGAAAGATGATTATTTGATGAT
CAAGGGATGCTGTGTTGGACCTAAGAAGAGGGTGGTCACGCTTCGTCAGT
CGCTTCTCAAACAGACATCTCGTTTAGCTCTTGAGGAAATCAAAATCAAG
TTCATTGATACCTCTTCCAAGTTTGGGCATGGCCGCTTCCAGACTACACA
GGAGAAACAGAAGTACTATGGACGCATGAAAGCATAATTATGCTAAAAAG
ACAAGAGTTTTGCACCGTTATAGTTAATTCAGGCAGTCTAAATTTTATCC
AGTTTGACTATCTTGGAACAGTTTTTGAGCCTGGCATCAGCTGTGTTTCT
TTTTCCTTTTTTTATTTTATTTTTTAAGAGATGGTCGTGCTTTATTCTAT
TGAATATTTTTAAATTTAAAAAAATTCCTCAGCTCCTATCTTGAAAAAAA
AAAAAAAAAAAAAAAAAAA
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