EY744538

Overview
NameEY744538
Unique NameEY744538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length976
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744538 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 6.587e-22
Identity = 59/139 (42.45%), Postives = 85/139 (61.15%), Query Frame = 2
Query:   89 VNDFCVADLK-LSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSG 493
            + DFCVADL   + S  G+ C P +    DDF+FS  L  AGNT++   +AVT   VA++P  N LG+S+ R+D A GG  P H HP A+EI +V+ G +  G + S  S N +Y + ++ G+  + P+GL+HFQ N G
Sbjct:   29 LQDFCVADLDGKAVSVNGHTCKPMSEA-GDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVG 166          

HSP 2 Score: 23.483 bits (49), Expect = 6.587e-22
Identity = 12/25 (48.00%), Postives = 17/25 (68.00%), Query Frame = 3
Query:  495 RTEPSVFVNFISPNPGL---PITDF 560
            +TE S+ V+F S NPG+   P+T F
Sbjct:  167 KTEASMVVSFNSQNPGIVFVPLTLF 191          
BLAST of EY744538 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.813e-21
Identity = 60/143 (41.96%), Postives = 81/143 (56.64%), Query Frame = 2
Query:   89 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTT-SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD 499
            + DFCVAD        G+PC     V  DDF  +  L    +TT S   + VT   V +   +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+     N ++ KTL KGD+ +FPQGL+HFQ N   D
Sbjct:   28 LQDFCVADRNSPVHVNGFPCKDAKDVNVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVLEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYD 170          
BLAST of EY744538 vs. ExPASy Swiss-Prot
Match: GL121_ORYSJ (Germin-like protein 12-1 OS=Oryza sativa subsp. japonica GN=Os12g0154700 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.092e-21
Identity = 60/143 (41.96%), Postives = 80/143 (55.94%), Query Frame = 2
Query:   89 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVF-SGLGVAGNTT-SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD 499
            + DFCVAD        G+PC     V  DDF   + L    +TT S   + VT   V +   +N LG+S+AR+D A  G  P HTHP A+EIL V  G +  GF++S+     N ++ KTL KGD+ +FPQGL+HFQ N   D
Sbjct:   28 LQDFCVADRNSPVRVNGFPCKDAKDVNVDDFFLEANLDKPMDTTKSKAGSNVTLINVMKLTGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVFEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYD 170          
BLAST of EY744538 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.171e-21
Identity = 59/139 (42.45%), Postives = 85/139 (61.15%), Query Frame = 2
Query:   89 VNDFCVADLK-LSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSG 493
            + DFCVADL   + S  G+ C P +    DDF+FS  L  AGNT++   +AVT   VA++P  N LG+S+ R+D A GG  P H HP A+EI +V+ G +  G + S  S N +Y + ++ G+  + P+GL+HFQ N G
Sbjct:    6 LQDFCVADLDGKAVSVNGHTCKPMSEA-GDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVG 143          

HSP 2 Score: 21.1718 bits (43), Expect = 4.171e-21
Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 3
Query:  495 RTEPSVFVNFISPNPGL---PITDF 560
            +TE  + V+F S NPG+   P+T F
Sbjct:  144 KTEAYMVVSFNSQNPGIVFVPLTLF 168          
BLAST of EY744538 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.274e-21
Identity = 59/139 (42.45%), Postives = 85/139 (61.15%), Query Frame = 2
Query:   89 VNDFCVADLK-LSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSG 493
            + DFCVADL   + S  G+ C P +    DDF+FS  L  AGNT++   +AVT   VA++P  N LG+S+ R+D A GG  P H HP A+EI +V+ G +  G + S  S N +Y + ++ G+  + P+GL+HFQ N G
Sbjct:   29 LQDFCVADLDGKAVSVNGHMCKPMSEA-GDDFLFSSKLAKAGNTSTPNGSAVTDLNVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVG 166          
BLAST of EY744538 vs. ExPASy Swiss-Prot
Match: GL33_ORYSJ (Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.029e-21
Identity = 56/139 (40.29%), Postives = 80/139 (57.55%), Query Frame = 2
Query:   89 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAA-VTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSG 493
            + DFCVADL    +  GYPC  P     D+F+FS  L   G+  +  N + VT   VA +P VN LG+S+ R+D A GG  P H HP A+E+ +V+ G +  G I S  + N  Y + ++ G+  + P+GL+HFQ N G
Sbjct:   32 LQDFCVADLDSEVTLNGYPC-KPTPAAGDEFLFSSRLATGGDVNANPNGSNVTQLDVAGWPGVNTLGVSMNRIDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVIPRGLMHFQFNVG 169          

HSP 2 Score: 22.3274 bits (46), Expect = 7.029e-21
Identity = 11/25 (44.00%), Postives = 17/25 (68.00%), Query Frame = 3
Query:  495 RTEPSVFVNFISPNPGL---PITDF 560
            +TE ++ V+F S NPG+   P+T F
Sbjct:  170 KTEATMVVSFNSQNPGIVFVPLTLF 194          
BLAST of EY744538 vs. ExPASy Swiss-Prot
Match: GL35_ORYSJ (Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.013e-20
Identity = 54/139 (38.85%), Postives = 81/139 (58.27%), Query Frame = 2
Query:   89 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAA-VTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSG 493
            + DFCVADL    +  G+ C  PA    D+F+FS  +   G+  +  N + VT   VA++P VN LG+S+ R+D A GG  P H HP A+E+ +V+ G +  G I +  + N  Y K ++ G+  + P+GL+HFQ N G
Sbjct:   32 LQDFCVADLNSEVTVNGHAC-KPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVG 169          

HSP 2 Score: 22.3274 bits (46), Expect = 2.013e-20
Identity = 11/25 (44.00%), Postives = 17/25 (68.00%), Query Frame = 3
Query:  495 RTEPSVFVNFISPNPGL---PITDF 560
            +TE ++ V+F S NPG+   P+T F
Sbjct:  170 KTEATMVVSFNSQNPGIVFVPLTLF 194          
BLAST of EY744538 vs. ExPASy Swiss-Prot
Match: GL36_ORYSJ (Germin-like protein 3-6 OS=Oryza sativa subsp. japonica GN=Os03g0694000 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.617e-20
Identity = 54/139 (38.85%), Postives = 81/139 (58.27%), Query Frame = 2
Query:   89 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAA-VTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSG 493
            + DFCVADL    +  G+ C  PA    D+F+FS  +   G+  +  N + VT   VA++P VN LG+S+ R+D A GG  P H HP A+E+ +V+ G +  G I +  + N  Y K ++ G+  + P+GL+HFQ N G
Sbjct:   34 LQDFCVADLDSKVTVNGHAC-KPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVG 171          

HSP 2 Score: 22.3274 bits (46), Expect = 2.617e-20
Identity = 11/25 (44.00%), Postives = 17/25 (68.00%), Query Frame = 3
Query:  495 RTEPSVFVNFISPNPGL---PITDF 560
            +TE ++ V+F S NPG+   P+T F
Sbjct:  172 KTEATMVVSFNSQNPGIVFVPLTLF 196          
BLAST of EY744538 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.617e-20
Identity = 59/143 (41.26%), Postives = 80/143 (55.94%), Query Frame = 2
Query:   89 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTT-SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD 499
            + DFCVAD        G PC     V+ DDF  +  L    +TT S   + VT   V +   +N L +S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+     N ++ KTL KGD+ +FPQGL+HFQ N   D
Sbjct:   28 LQDFCVADKHSPVRVNGLPCKDAKDVSVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLSISMARIDYAPKGQNPPHTHPRATEILTVLEGSLYVGFVTSNQANRENKLFTKTLNKGDVFVFPQGLIHFQFNPSYD 170          
BLAST of EY744538 vs. ExPASy Swiss-Prot
Match: GL123_ORYSJ (Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.617e-20
Identity = 56/150 (37.33%), Postives = 80/150 (53.33%), Query Frame = 2
Query:   89 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG---------LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD 499
            + D CVAD        G+PC     V+ DDF  +             AG+  ++IN       V +   +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+     N ++ KTL KGD+ +FP+GL+HFQ N   D
Sbjct:   28 LQDLCVADKNSPVRVNGFPCKDAKDVSVDDFFLAANLDKPMDITKSKAGSNVTLIN-------VMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILSVIEGSLYVGFVTSNQANGENKLFTKTLNKGDVFVFPEGLIHFQFNPSYD 170          
The following BLAST results are available for this feature:
BLAST of EY744538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GER2_WHEAT6.587e-2242.45Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
GL122_ORYSJ1.813e-2141.96Germin-like protein 12-2 OS=Oryza sativa subsp. ja... [more]
GL121_ORYSJ3.092e-2141.96Germin-like protein 12-1 OS=Oryza sativa subsp. ja... [more]
OXO1_HORVU4.171e-2142.45Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]
GER3_WHEAT5.274e-2142.45Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
GL33_ORYSJ7.029e-2140.29Germin-like protein 3-3 OS=Oryza sativa subsp. jap... [more]
GL35_ORYSJ2.013e-2038.85Germin-like protein 3-5 OS=Oryza sativa subsp. jap... [more]
GL36_ORYSJ2.617e-2038.85Germin-like protein 3-6 OS=Oryza sativa subsp. jap... [more]
GL124_ORYSJ2.617e-2041.26Putative germin-like protein 12-4 OS=Oryza sativa ... [more]
GL123_ORYSJ2.617e-2037.33Putative germin-like protein 12-3 OS=Oryza sativa ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-009-F12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744538 ID=EY744538; Name=EY744538; organism=Citrus sinensis; type=EST; length=976bp
ATCAAAATAACTACACTAGATATTAGTCAAAATGCTTCACATTCTCTTCT
TCTTCCTTGCTTTCGTATCCTCTTCCTCCAATGCTATGGTTAACGACTTC
TGCGTCGCTGACCTAAAGCTGTCGGATAGTCCCGCCGGCTATCCTTGCGT
GCCCCCCGCTATGGTTACCGCTGACGACTTCGTATTTTCGGGCCTCGGCG
TGGCCGGAAACACCACGAGCATTATCAACGCGGCAGTGACACCTGCATTT
GTAGCTCAATTTCCGGCCGTGAATGGGCTCGGACTCTCCTTGGCACGCCT
AGATCTTGCAAAGGGTGGCGTAATCCCAATCCACACTCATCCAGCTGCTT
CCGAAATCCTTCTTGTTGTGCATGGCTGCATAACTGCCGGGTTCATTTCC
TCTTCAGCTAACACTGTTTACGTAAAGACGCTTAAGAAGGGAGATATCAT
GATCTTTCCACAAGGGTTGTTGCATTTTCAAGTAAATTCCGGTGCGGACG
GAGCCCTCGGTTTTTGTTAACTTCATCAGCCCGAATCCTGGACTCCCAAT
CACCGATTTCGCCCTTATTTGGCTAACAACTTGTCTTCCCCATTGGTGGA
CCAAACCACTTTCCTTGACAAGCCTAACGGTGAAAAAGGCTCAAGGCTAT
CCCTGGGGGGACCCGGGTAGGGTTAATTAGTAACCAAAATTCCTCATTTG
GTAATCTTAAAACTCTAACATATGCATTTAACTACCAAAGGGTTTTCGAA
TTCGAGGGACATCCACAAAATATCACATTATCTCGAGCCACCACTTCCAC
CCAATCTTTTCTTCTCCGATGGGGAGACAAATTTCCACCGCCACACAAGC
CAACACGTAACACCAGACCCGAACGCACGCGAAGGCAACCCAAATGTCGC
GTGCCGCACACACACGAACAGAGCATGCCAAGTAATGAAACGGACACCGC
ACACACAAAACGCGCACGAAAAAAGC
back to top