EY744538

Overview
NameEY744538
Unique NameEY744538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length976
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744538 vs. ExPASy Swiss-Prot
Match: GL34_ORYSJ (Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.428e-20
Identity = 54/139 (38.85%), Postives = 80/139 (57.55%), Query Frame = 2
Query:   89 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAA-VTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSG 493
            + DFCVADL    +  G+ C  PA    D+F+FS  +   G+  +  N + VT   VA++P VN LG+S+ R+D A GG  P H HP A+E+ +V+ G +  G I +    N  Y K ++ G+  + P+GL+HFQ N G
Sbjct:   34 LQDFCVADLDSKVTVNGHAC-KPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDMGNRYYSKVVRAGETFVIPRGLMHFQFNVG 171          

HSP 2 Score: 22.3274 bits (46), Expect = 4.428e-20
Identity = 11/25 (44.00%), Postives = 17/25 (68.00%), Query Frame = 3
Query:  495 RTEPSVFVNFISPNPGL---PITDF 560
            +TE ++ V+F S NPG+   P+T F
Sbjct:  172 KTEATMVVSFNSQNPGIVFVPLTLF 196          
BLAST of EY744538 vs. ExPASy Swiss-Prot
Match: GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.420e-19
Identity = 51/121 (42.15%), Postives = 73/121 (60.33%), Query Frame = 2
Query:  155 PAMVTADDFVFSGLGVAGNTTSIINA---AVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGAL 508
            P  +T D F F+G     NT+S        VT A +A+FPA+NG  +S A L      V P HTHP ++E+LLVV G ++ GFI ++ N +Y + L  GD+ +FP+G++HFQ NSG   A+
Sbjct:   42 PMNITGDFFTFTGFRKVFNTSSAPEPNSFTVTKATMAEFPALNGQSVSYATLVFPPSTVNPPHTHPRSAELLLVVDGALSVGFIDTT-NKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAM 161          
BLAST of EY744538 vs. ExPASy Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.420e-19
Identity = 61/178 (34.27%), Postives = 89/178 (50.00%), Query Frame = 2
Query:   95 DFCVADLKLSDSPA-----GYPCVPPAMVTADDFVFSGLGVAGNTTSII---NAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFC*LHQPESWTPNHRFRPYLANNLSSPLVDQ 604
            D+CVAD   + +       G  C+ PA+  AD F  S L  A N  + +   NA +T    A  P  N  GL++AR+DLA GG+ P H+HP ASE  LV+ G +  GF  +S   +Y + L+ G+  +FP+ ++HF  N   D A     L    S +P  +  P+ A      L D+
Sbjct:   29 DYCVADTAAATAAGAFHLNGLACIDPALARADHFATSALSRATNPAATLYGFNATLTSP-AASLPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLSGSVLVGFADTSYR-LYTQLLRAGEAFVFPRAMVHFLYN--MDTAAPAVVLSGLNSQSPGAQLVPFSAFRTEPRLPDE 202          
BLAST of EY744538 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.450e-18
Identity = 45/119 (37.82%), Postives = 72/119 (60.50%), Query Frame = 2
Query:  137 GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSG 493
            G+ C  P+ + A DF    L  AG+  +++ ++       +FP +N LG+S+AR D+A  G +  H+HP ASE++ V  G + AGF  +    ++ KTL +GD+ IFP+GL+HF +N G
Sbjct:   46 GFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDTKGK-LFQKTLAEGDVFIFPRGLVHFIMNYG 163          
BLAST of EY744538 vs. ExPASy Swiss-Prot
Match: GL91_ORYSJ (Germin-like protein 9-1 OS=Oryza sativa subsp. japonica GN=Os09g0568500 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.537e-17
Identity = 48/116 (41.38%), Postives = 69/116 (59.48%), Query Frame = 2
Query:  155 PAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAN-TVYVKTLKKGDIMIFPQGLLHFQVNSGAD 499
            P+ +    F +  L V GN+       VT A  A+FPA+ G  +S A L    G V P H HP ASE+L+VV G +  G + ++ N TVY +TL+ GD+ +FP+G++HFQ N+G D
Sbjct:   42 PSGIDGAFFTYKNL-VTGNSGDPAKLTVTKATHAEFPALLGQSVSYAALVFGAGTVNPPHIHPRASELLVVVQGPLLVGLVDAARNGTVYTQTLQTGDMFVFPKGMVHFQFNNGTD 156          
BLAST of EY744538 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 7.881e-17
Identity = 50/139 (35.97%), Postives = 73/139 (52.52%), Query Frame = 2
Query:   89 VNDFCVADLKLSDSPA---GYPCVPPAMVTADDFVFSGLGVAGNTTS---IINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVN 487
            + D+CV+    S       G  C  P   +  DF  S L   GNT +   +IN  VT    A  P +N +GL++ARLD    GV+P H HP ASE+ + + G +  GF+ +S   V+ + L  G+  +FP+GL+HF  N
Sbjct:   23 LQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRPGNTKTKPFMINVTVTTT--ANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVLLVGFVDTSGR-VFTQELHPGETFVFPKGLIHFLYN 158          
BLAST of EY744538 vs. ExPASy Swiss-Prot
Match: GL93_ORYSJ (Germin-like protein 9-3 OS=Oryza sativa subsp. japonica GN=Os09g0568700 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.138e-15
Identity = 47/123 (38.21%), Postives = 72/123 (58.54%), Query Frame = 2
Query:  164 VTADDFVFSGLGVAGNTTSI--------INAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGAL 508
            +T D F F+G     N  S+         N  VT A +A+FPA+NG  +S A L      + P HTHP ++E+LL+V G ++ GF+ ++ N +Y + L  GD+ +FP+G++HFQ NSG   A+
Sbjct:   43 ITGDFFTFTGFR---NPLSMNMSMPMPNANFTVTKATMAEFPALNGQSVSYAVLMYPPATLNPPHTHPRSAELLLLVDGALSVGFVDTT-NKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAM 161          
The following BLAST results are available for this feature:
BLAST of EY744538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL34_ORYSJ4.428e-2038.85Putative germin-like protein 3-4 OS=Oryza sativa s... [more]
GL92_ORYSJ8.420e-1942.15Putative germin-like protein 9-2 OS=Oryza sativa s... [more]
GL31_ORYSJ8.420e-1934.27Germin-like protein 3-1 OS=Oryza sativa subsp. jap... [more]
GL111_ORYSJ2.450e-1837.82Germin-like protein 11-1 OS=Oryza sativa subsp. ja... [more]
GL91_ORYSJ3.537e-1741.38Germin-like protein 9-1 OS=Oryza sativa subsp. jap... [more]
GL11_ARATH7.881e-1735.97Germin-like protein subfamily 1 member 1 OS=Arabid... [more]
GL93_ORYSJ1.138e-1538.21Germin-like protein 9-3 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-009-F12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744538 ID=EY744538; Name=EY744538; organism=Citrus sinensis; type=EST; length=976bp
ATCAAAATAACTACACTAGATATTAGTCAAAATGCTTCACATTCTCTTCT
TCTTCCTTGCTTTCGTATCCTCTTCCTCCAATGCTATGGTTAACGACTTC
TGCGTCGCTGACCTAAAGCTGTCGGATAGTCCCGCCGGCTATCCTTGCGT
GCCCCCCGCTATGGTTACCGCTGACGACTTCGTATTTTCGGGCCTCGGCG
TGGCCGGAAACACCACGAGCATTATCAACGCGGCAGTGACACCTGCATTT
GTAGCTCAATTTCCGGCCGTGAATGGGCTCGGACTCTCCTTGGCACGCCT
AGATCTTGCAAAGGGTGGCGTAATCCCAATCCACACTCATCCAGCTGCTT
CCGAAATCCTTCTTGTTGTGCATGGCTGCATAACTGCCGGGTTCATTTCC
TCTTCAGCTAACACTGTTTACGTAAAGACGCTTAAGAAGGGAGATATCAT
GATCTTTCCACAAGGGTTGTTGCATTTTCAAGTAAATTCCGGTGCGGACG
GAGCCCTCGGTTTTTGTTAACTTCATCAGCCCGAATCCTGGACTCCCAAT
CACCGATTTCGCCCTTATTTGGCTAACAACTTGTCTTCCCCATTGGTGGA
CCAAACCACTTTCCTTGACAAGCCTAACGGTGAAAAAGGCTCAAGGCTAT
CCCTGGGGGGACCCGGGTAGGGTTAATTAGTAACCAAAATTCCTCATTTG
GTAATCTTAAAACTCTAACATATGCATTTAACTACCAAAGGGTTTTCGAA
TTCGAGGGACATCCACAAAATATCACATTATCTCGAGCCACCACTTCCAC
CCAATCTTTTCTTCTCCGATGGGGAGACAAATTTCCACCGCCACACAAGC
CAACACGTAACACCAGACCCGAACGCACGCGAAGGCAACCCAAATGTCGC
GTGCCGCACACACACGAACAGAGCATGCCAAGTAATGAAACGGACACCGC
ACACACAAAACGCGCACGAAAAAAGC
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