EY744524

Overview
NameEY744524
Unique NameEY744524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length969
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744524 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.732e-41
Identity = 47/87 (54.02%), Postives = 61/87 (70.11%), Query Frame = 1
Query:  433 ALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSSYDMIGWPWITN*GDQGGPLNLPILPPELFKSLGTPPPTGCIAYLVHPGTGKTLV 693
            AL+++SY LH ILP+K+DPLV+LMKVEK+PDS+YDM+G        +    + LPI  PELF+SLG   P G + Y   PGTGKTL+
Sbjct:  111 ALKHESYTLHRILPNKIDPLVSLMKVEKIPDSTYDMVG-GLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLY-GPPGTGKTLL 195          

HSP 2 Score: 73.559 bits (179), Expect = 1.732e-41
Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 2
Query:  140 EGLRQYYLQHIHELQLQVRQKTHNLSRLEAQRNELNSIVRMLKEELQLLQEPVSYVGEVV 319
            +G++ YY   I EL+++V +K  +L RLEAQRNELN+ VRMLKEELQLL  P S+V EVV
Sbjct:   14 KGIKSYYCSKIEELEIKVNEKAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEVV 73          

HSP 3 Score: 52.7582 bits (125), Expect = 1.732e-41
Identity = 23/39 (58.97%), Postives = 31/39 (79.49%), Query Frame = 3
Query:  312 KLLPVMGKNKVLVKGHPEGKYVVDIDKNIDITKIAPPAR 428
            +++ +MGKNKVLVK +PEGK+VVDID  +DI K+ P  R
Sbjct:   71 EVVKLMGKNKVLVKVNPEGKFVVDIDPTVDIAKLTPSTR 109          
BLAST of EY744524 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.105e-30
Identity = 111/286 (38.81%), Postives = 141/286 (49.30%), Query Frame = 2
Query:   53 MAAVRIETNQPESAAPEEVCAAKGSS-KQGEGLRQYYLQHIHELQLQVRQKTHNLSRLEAQRNELNSIVRMLKEELQLLQEPVSYVGEVVTSYXXXXXXXXXXXXXXXXX*Y**KY*YNQDRSA----------------SKMLHFVMTAMFFI*SCQAK*IPWSTL*RLKRSLIPHMT*LGGLGSQIREIKEGH*TFLSYLPNCSSPLEHLHPRGVLLIWYTLVLGKPWSG*NW----GLHHTDCAFNQGSPDHRNSPTSYMTARPR*TEKLFFPFTRHLPPRTF 847
            MAAV +++ +PE+A  EE C  KG++ KQGEGL+QYYLQHIHELQ Q+RQKT+NL+RLEAQRNELNS VRML+EELQLLQEP SYVGEVV                        KY  + D+S                 S +LH V+          +K  P   L ++++        +GGL  QI+EIKE     + + P     L    P+GVLL       G P +G         HHTDC F + S         Y+    R   +LF     H P   F
Sbjct:    1 MAAVGVDSRRPETAM-EETCNVKGAAAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEG--------KYVVDIDKSIDITKITPSTRVALRNDSYVLHLVL---------PSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKH-PELFESLGIAQPKGVLL------YGPPGTGKTLLARAVAHHTDCTFIRVSGS--ELVQKYIGEGSRMVRELFVMAREHAPSIIF 259          
BLAST of EY744524 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.877e-28
Identity = 49/88 (55.68%), Postives = 60/88 (68.18%), Query Frame = 1
Query:  430 VALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSSYDMIGWPWITN*GDQGGPLNLPILPPELFKSLGTPPPTGCIAYLVHPGTGKTLV 693
            VALR+DSY +H ILP+KVDPLV+LM VEKVPDS+Y MIG        +    + LPI  PELF++LG   P G + Y   PGTGKTL+
Sbjct:  161 VALRSDSYDVHRILPTKVDPLVSLMMVEKVPDSTYQMIG-GLDEQIKEIREVIELPIKHPELFENLGIAQPKGVLLY-GPPGTGKTLL 246          

HSP 2 Score: 50.0618 bits (118), Expect = 9.877e-28
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 2
Query:  131 KQGEGL-RQYYLQHIHELQLQVRQKTHNLSRLEAQRNELNSIVRMLKEELQLLQEPVSYVGEVV 319
            +  EG  + +Y   +  L++Q+ +KT  L  LE +R ELN  VR L+EE+ ++QEP S VG VV
Sbjct:   61 RMAEGFCKNFYSNKLDHLEVQIAKKTKILRVLEQKRAELNRRVRFLREEISIVQEPSSNVGVVV 124          

HSP 3 Score: 32.3426 bits (72), Expect = 9.877e-28
Identity = 13/34 (38.24%), Postives = 23/34 (67.65%), Query Frame = 3
Query:  327 MGKNKVLVKGHPEGKYVVDIDKNIDITKIAPPAR 428
            MGK +VLVK +P+GKY+V ++  ++  ++    R
Sbjct:  127 MGKMQVLVKTNPDGKYLVKVEPGVNYDELKAGVR 160          
BLAST of EY744524 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.154e-26
Identity = 105/286 (36.71%), Postives = 134/286 (46.85%), Query Frame = 2
Query:   53 MAAVRIETNQPESAAPEEVCAAKGSS-KQGEGLRQYYLQHIHELQLQVRQKTHNLSRLEAQRNELNSIVRMLKEELQLLQEPVSYVGEVVTSYXXXXXXXXXXXXXXXXX*Y**KY*YNQDRSA----------------SKMLHFVMTAMFFI*SCQAK*IPWSTL*RLKRSLIPHMT*LGGLGSQIREIKEGH*TFLSYLPNCSSPLEHLHPRGVLLIWYTLVLGKPWSG*NW----GLHHTDCAFNQGSPDHRNSPTSYMTARPR*TEKLFFPFTRHLPPRTF 847
            MAAV +E   P +A  EE C  KG++ KQGEGL +YYLQH+ ELQ   R+K++NL+RLEAQRNELNS VRML+EELQLLQEP SYVGEVV                        KY  + D+S                 S +LH V+          +K  P   L ++++        +GGL  QI+EIKE     + + P     L    P+GVLL       G P +G         HHTDC F + S         Y+    R   +LF     H P   F
Sbjct:    1 MAAVGVEARPPVTAM-EETCNVKGAAAKQGEGLNKYYLQHLDELQRLQREKSYNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEG--------KYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVL---------PSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKH-PELFESLGIAQPKGVLL------YGPPGTGKTLLARAVAHHTDCTFIRVSGS--ELVQKYIGEGSRMVRELFVMAREHAPSIIF 259          
BLAST of EY744524 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4)

HSP 1 Score: 84.7297 bits (208), Expect = 8.629e-16
Identity = 48/90 (53.33%), Postives = 60/90 (66.67%), Query Frame = 1
Query:  424 QDVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSSYDMIGWPWITN*GDQGGPLNLPILPPELFKSLGTPPPTGCIAYLVHPGTGKTLV 693
            Q V LR+DSY+LH +L +K DPLV+LM VEKVPDS+YDM+G        +    + LP+  PELF+SLG   P G I Y   PGTGKTL+
Sbjct:  111 QRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVG-GLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILY-GPPGTGKTLL 198          

HSP 2 Score: 75.0998 bits (183), Expect = 6.804e-13
Identity = 75/246 (30.49%), Postives = 106/246 (43.09%), Query Frame = 2
Query:  143 GLRQYYLQHIHELQLQVRQKTHNLSRLEAQRNELNSIVRMLKEELQLLQEPVSYVGEVVTSYXXXXXXXXXXXXXXXXX*Y**KY*YN-------QDRSASKMLHFVMTAMFFI*SCQAK*IPWSTL*RLKRSLIPHMT*LGGLGSQIREIKEGH*TFLSYLPNCSSPLEHLHPRGVLLIWYTLVLGKPWSG*NW----GLHHTDCAFNQGSPDHRNSPTSYMTARPR*TEKLFFPFTRHLPPRTF 847
            G++ Y+ Q I E +L++R KT N+ RLEAQRN LN  VR +K+EL+LLQEP SYVGEV+                        KY  +       +D  AS+ +     +       + K  P  +L  +++        +GGL  QI+EIKE     + + P     L    P+GV+L       G P +G         HHTDC F + S         Y+    R   +LF     H P   F
Sbjct:   18 GIKPYFEQKIQETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIKIVSDKKVLVKVQPEG--------KYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKH-PELFESLGIAQPKGVIL------YGPPGTGKTLLARAVAHHTDCKFIRVS--GAELVQKYIGEGSRMVRELFVMAREHAPSIIF 246          
The following BLAST results are available for this feature:
BLAST of EY744524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
PRS8_DICDI1.732e-4154.0226S protease regulatory subunit 8 OS=Dictyostelium... [more]
PRS8A_ARATH2.105e-3038.8126S protease regulatory subunit 8 homolog A OS=Ara... [more]
PRS8_ENCCU9.877e-2855.6826S protease regulatory subunit 8 homolog OS=Encep... [more]
PRS8B_ARATH9.154e-2636.7126S protease regulatory subunit 8 homolog B OS=Ara... [more]
PRS8_YEAST8.629e-1653.3326S protease regulatory subunit 8 homolog OS=Sacch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-009-E10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744524 ID=EY744524; Name=EY744524; organism=Citrus sinensis; type=EST; length=969bp
CCACGCGTCCGCGATTAGATTCGAACAAATCGAACTCGTTCTCTCGGAAA
GAATGGCCGCTGTAAGAATCGAAACGAACCAGCCGGAATCGGCGGCGCCA
GAGGAGGTGTGTGCGGCGAAAGGATCATCTAAACAAGGAGAGGGATTGAG
GCAATACTACCTCCAACACATTCACGAACTCCAGCTCCAAGTCCGTCAAA
AAACCCACAATCTCAGTCGCCTCGAAGCCCAGCGTAACGAACTCAATTCT
ATAGTGCGGATGCTTAAAGAAGAATTACAGCTTCTTCAAGAGCCTGTATC
CTATGTCGGTGAAGTTGTTACCAGTTATGGGAAAAAATAAGGTTCTTGTT
AAGGGTCATCCTGAGGGGAAATATGTTGTTGATATTGATAAAAATATTGA
TATAACCAAGATCGCTCCGCCAGCAAGATGTTGCACTTCGTAATGACAGC
TATGTTCTTCATTTGATCCTGCCAAGCAAAGTAGATCCCCTGGTCAACCT
TATGAAGGTTGAAAAGGTCCCTGATTCCTCATATGACATGATTGGGTGGC
CTTGGATCACAAATTAGGGAGATCAAGGAGGGCCATTGAACCTTCCTATC
CTACCTCCCGAATTGTTCAAGTCCCTTGGAACACCTCCACCCACGGGGTG
TATTGCTTATTTGGTACACCCTGGTACTGGGAAAACCCTGGTCTGGCTAA
AACTGGGGCCTCCACCACACTGATTGTGCTTTCAACCAAGGGTCCCCGGA
CCACCGTAACAGCCCCACATCTTATATGACAGCGCGCCCCAGATGAACTG
AAAAACTTTTCTTCCCCTTCACACGACACTTACCCCCACGCACCTTTTCC
TAGTAGTATGACTGAGGAACCGAACACGAGAATCTGCCGTGATACGCAAC
TTGAAAGGCGGAGAACGCCACACAAATGCAGAAGCGCCAATCACACCTGA
CACACCAAACCGAGAAAAC
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