EY744523

Overview
NameEY744523
Unique NameEY744523
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1012
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744523 vs. ExPASy Swiss-Prot
Match: BBS_PHASS (Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.442e-53
Identity = 99/165 (60.00%), Postives = 128/165 (77.58%), Query Frame = 2
Query:   17 ELIEKFKRMCDKSMINKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLISLRPSVKRFMMYQQ*CFAGGTVLRLAKDLAENNKGARVLVVCSEIAAVTFRGPADTHLDSLVGHALF 511
            +L +KF+R+C+K+ I KR+    EE L  NP    +M  SL+ RQ++ + E+PKLG +AATKAI++WGQPKS+ITHLIFCTTSG+D+PGADYQLT+++ L P+V+R M+YQQ CFAGGT LRLAK LAE+ KGARVLVVC+E   V FR P++ H D LV  ALF
Sbjct:   51 DLKKKFQRICEKTAIRKRHFVWNEEFLTANPCFSTFMDKSLNVRQEVAISEIPKLGAKAATKAIEDWGQPKSRITHLIFCTTSGMDLPGADYQLTQILGLNPNVERVMLYQQGCFAGGTTLRLAKCLAESRKGARVLVVCAETTTVLFRAPSEEHQDDLVTQALF 215          
BLAST of EY744523 vs. ExPASy Swiss-Prot
Match: CHS6_MEDSA (Chalcone synthase 6-4 (Fragment) OS=Medicago sativa GN=CHS6-4 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 9.344e-53
Identity = 101/111 (90.99%), Postives = 105/111 (94.59%), Query Frame = 2
Query:  179 LGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLISLRPSVKRFMMYQQ*CFAGGTVLRLAKDLAENNKGARVLVVCSEIAAVTFRGPADTHLDSLVGHALF 511
            LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+ LRP VKR+MMYQQ CFAGGTVLRLAKDLAENNKGARVLVVCSE+ AVTFRGP+DTHLDSLVG ALF
Sbjct:    1 LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALF 111          
BLAST of EY744523 vs. ExPASy Swiss-Prot
Match: CHS7_MEDSA (Chalcone synthase (Fragment) OS=Medicago sativa GN=CHSII PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 5.880e-39
Identity = 81/92 (88.04%), Postives = 85/92 (92.39%), Query Frame = 2
Query:  236 ITHLIFCTTSGVDMPGADYQLTKLISLRPSVKRFMMYQQ*CFAGGTVLRLAKDLAENNKGARVLVVCSEIAAVTFRGPADTHLDSLVGHALF 511
            ITHLI CTTS VDMPGADYQLTKL+ LRP VKR+MMYQQ CFAGGTVLRLAKDLAENNKGARVLVVCSE+ AVTFRGP+DTHLDSLVG ALF
Sbjct:    1 ITHLIVCTTS-VDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALF 91          
BLAST of EY744523 vs. ExPASy Swiss-Prot
Match: CHSY_MALDO (Chalcone synthase (Fragment) OS=Malus domestica GN=CHS PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.652e-23
Identity = 54/58 (93.10%), Postives = 55/58 (94.83%), Query Frame = 2
Query:  338 MMYQQ*CFAGGTVLRLAKDLAENNKGARVLVVCSEIAAVTFRGPADTHLDSLVGHALF 511
            MMYQQ CFAGGTVLRLAKDLAENNKGARVLVVCSEI AVTFRGP+DTHLDSLVG ALF
Sbjct:    1 MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 58          
BLAST of EY744523 vs. ExPASy Swiss-Prot
Match: PKS1_DICDI (Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.471e-15
Identity = 56/190 (29.47%), Postives = 94/190 (49.47%), Query Frame = 2
Query:   17 ELIEKFKRMCDKSMINKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLISLRPSVKRFMMYQQ*CFAGGTVLRLAKDLAENNKGARVLVVCSEIAAVTFRGPADTHLDSLVGHALFQRWGCCCDRGCPC*HPRPSRPDETP 586
            E  EK KR+ ++S I  R++ + +    EN     ++    D       V VP L ++A  +A+K+WG  K  ITH++  T++G+ +P  +++L  L+ L   V+R  +    C AG + LR A  LA+ +   R+LVVC+E+ ++ F        D +V  ++F         GC        R +ETP
Sbjct: 2819 ETNEKVKRIFEQSQIKTRHL-VRDYTKPENSIKFRHLETITDVNNQFKKV-VPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHFSNTDGG--DQMVASSIFADGSAAYIIGC------NPRIEETP 2998          
The following BLAST results are available for this feature:
BLAST of EY744523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
BBS_PHASS1.442e-5360.00Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 ... [more]
CHS6_MEDSA9.344e-5390.99Chalcone synthase 6-4 (Fragment) OS=Medicago sativ... [more]
CHS7_MEDSA5.880e-3988.04Chalcone synthase (Fragment) OS=Medicago sativa GN... [more]
CHSY_MALDO2.652e-2393.10Chalcone synthase (Fragment) OS=Malus domestica GN... [more]
PKS1_DICDI3.471e-1529.47Probable polyketide synthase 1 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-009-E09-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744523 ID=EY744523; Name=EY744523; organism=Citrus sinensis; type=EST; length=1012bp
CCACGCGTCCGCGACGGAGCTTATAGAGAAGTTCAAGCGCATGTGTGACA
AGTCGATGATTAATAAGCGTTACATGTACTTAACGGAAGAGATTTTGAAG
GAAAACCCCAACATGTGCGCTTACATGGCTCCATCACTCGACGCACGTCA
AGACATTGTGGTGGTCGAAGTGCCGAAGCTCGGGAAAGAAGCTGCTACGA
AGGCCATCAAAGAATGGGGCCAGCCCAAGTCTAAGATCACCCACCTCATC
TTCTGCACCACCTCCGGCGTCGACATGCCCGGCGCCGACTACCAGCTCAC
CAAACTGATCAGCCTGCGCCCCTCCGTCAAGCGCTTCATGATGTACCAAC
AATGATGTTTCGCCGGCGGCACTGTTCTTCGCCTCGCTAAAGACTTGGCT
GAGAACAACAAGGGCGCTCGCGTTCTTGTTGTCTGTTCGGAGATCGCGGC
AGTCACTTTCCGCGGCCCTGCAGATACTCATCTTGATTCTCTTGTGGGCC
ATGCTTTGTTCCAGAGATGGGGTTGCTGCTGTGATCGTGGGTGCCCATGC
TGACACCCTCGGCCTAGCCGTCCAGATGAAACACCTACTGTTCACTTGAC
ACAAGATTCACCACCGTAACCGAAGGGAGGGAGACAGAAAAATCATTTGC
GAATAAGCGCCGACTTACATTACCTATTTGATTCAACAAAGCCCACCGGT
CTCCCATCTCACACAATAAAGAAAACACACTCCTGTCGCCAAACATCTGC
CCACCGTTTGGCCCATCGCCCTACTTCCACCCTCATCCTTTCTGGGATCA
GTACACCCCGCGCGGGGCCCTGCCGACGCGAGCCGCCCCACTCGAACACG
ACTACCGGCACCACCAACACAGCGGAGCACACCACAAACGCGACCTACCC
GACCCCACGGTGCACGCGACACAAACATCACAGCGACAACCCACACACCT
GCCCGCTATCAATCCAACAGCTCCTCACTCAACCGGATACTCAAACAACA
CCACCATCCACT
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