EY744520

Overview
NameEY744520
Unique NameEY744520
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1081
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY744520 vs. ExPASy Swiss-Prot
Match: RAB15_MOUSE (Ras-related protein Rab-15 OS=Mus musculus GN=Rab15 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 2.082e-37
Identity = 76/149 (51.01%), Postives = 104/149 (69.80%), Query Frame = 3 
Query:  102 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN 548
            L +LLLIGDSGVGK+CLL R                  K++TI++DG ++++QIWDTAGQER++TIT  YYR A GI LVYD++ E S+ +I  W+ +++++A + V KIL+GNKAD +E KR V   +GQ LA EYG+ F+ETSA TN
Sbjct:    8 LFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIDVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKAD-EEQKRQVGREQGQQLAKEYGMDFYETSACTN 155
[Close]
BLAST of EY744520 vs. ExPASy Swiss-Prot
Match: RAB3_DROME (Ras-related protein Rab-3 OS=Drosophila melanogaster GN=Rab3 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.719e-37
Identity = 76/149 (51.01%), Postives = 103/149 (69.13%), Query Frame = 3 
Query:  102 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN 548
            + KLL+IG+S VGK+  L R                  K++T+    KR+KLQIWDTAGQER+RTITTAYYRGAMG +L+YDVT+E SFN++++W+  I+ ++ DN   ILVGNK DM E +R +   +G+ LAD+ G++FFETSAK N
Sbjct:   21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDM-EDQRVISFERGRQLADQLGVEFFETSAKEN 168
[Close]
BLAST of EY744520 vs. ExPASy Swiss-Prot
Match: RAB3B_MOUSE (Ras-related protein Rab-3B OS=Mus musculus GN=Rab3b PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 3.551e-37
Identity = 77/149 (51.68%), Postives = 101/149 (67.79%), Query Frame = 3 
Query:  102 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN 548
            + KLL+IG+S VGK+  L R                  K++T+    KR+KLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W   I+ ++ DN   ILVGNK DM+E +R VPT KG+ LA++ G  FFE SAK N
Sbjct:   22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEE-ERVVPTEKGRLLAEQLGFDFFEASAKEN 169
[Close]
BLAST of EY744520 vs. ExPASy Swiss-Prot
Match: RAB3B_MESAU (Ras-related protein Rab-3B OS=Mesocricetus auratus GN=RAB3B PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 3.551e-37
Identity = 77/149 (51.68%), Postives = 101/149 (67.79%), Query Frame = 3 
Query:  102 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN 548
            + KLL+IG+S VGK+  L R                  K++T+    KR+KLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W   I+ ++ DN   ILVGNK DM+E +R VPT KG+ LA++ G  FFE SAK N
Sbjct:   22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEE-ERVVPTEKGRLLAEQLGFDFFEASAKEN 169
[Close]
BLAST of EY744520 vs. ExPASy Swiss-Prot
Match: RAB3B_BOVIN (Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 3.551e-37
Identity = 77/149 (51.68%), Postives = 101/149 (67.79%), Query Frame = 3 
Query:  102 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN 548
            + KLL+IG+S VGK+  L R                  K++T+    KR+KLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W   I+ ++ DN   ILVGNK DM+E +R VPT KG+ LA++ G  FFE SAK N
Sbjct:   22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEE-ERVVPTEKGRLLAEQLGFDFFEASAKEN 169
[Close]
BLAST of EY744520 vs. ExPASy Swiss-Prot
Match: RAB3B_RAT (Ras-related protein Rab-3B OS=Rattus norvegicus GN=Rab3b PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 4.637e-37
Identity = 76/149 (51.01%), Postives = 101/149 (67.79%), Query Frame = 3 
Query:  102 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN 548
            + KLL+IG+S VGK+  L R                  K++T+    KR+KLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W   I+ ++ DN   ILVGNK DM+E +R +PT KG+ LA++ G  FFE SAK N
Sbjct:   22 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEE-ERVIPTEKGRLLAEQLGFDFFEASAKEN 169
[Close]
BLAST of EY744520 vs. ExPASy Swiss-Prot
Match: RAB3_CAEEL (Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 7.910e-37
Identity = 75/149 (50.34%), Postives = 103/149 (69.13%), Query Frame = 3 
Query:  102 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN 548
            + KLL+IG+S VGK+  L R                  K++T+    KR+KLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN++++W   I+ ++ +N   +LVGNK DMD S+R V   +G+ LAD+ G++FFETSAK N
Sbjct:   22 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMD-SERVVSMDRGRQLADQLGLEFFETSAKEN 169
[Close]
BLAST of EY744520 vs. ExPASy Swiss-Prot
Match: RAB3C_HUMAN (Ras-related protein Rab-3C OS=Homo sapiens GN=RAB3C PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 2.301e-36
Identity = 76/149 (51.01%), Postives = 101/149 (67.79%), Query Frame = 3 
Query:  102 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN 548
            + KLL+IG+S VGK+  L R                  K++T+  + KRIKLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W   I+ ++ DN   ILVGNK DM E +R + T +GQ L ++ G +FFETSAK N
Sbjct:   30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDM-EDERVISTERGQHLGEQLGFEFFETSAKDN 177
[Close]
BLAST of EY744520 vs. ExPASy Swiss-Prot
Match: RAB3C_BOVIN (Ras-related protein Rab-3C OS=Bos taurus GN=RAB3C PE=2 SV=3)

HSP 1 Score: 153.295 bits (386), Expect = 2.301e-36
Identity = 76/149 (51.01%), Postives = 101/149 (67.79%), Query Frame = 3 
Query:  102 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN 548
            + KLL+IG+S VGK+  L R                  K++T+  + KRIKLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W   I+ ++ DN   ILVGNK DM E +R + T +GQ L ++ G +FFETSAK N
Sbjct:   30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDM-EDERVISTERGQHLGEQLGFEFFETSAKDN 177
[Close]
BLAST of EY744520 vs. ExPASy Swiss-Prot
Match: RAB3C_RAT (Ras-related protein Rab-3C OS=Rattus norvegicus GN=Rab3c PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.926e-36
Identity = 76/149 (51.01%), Postives = 100/149 (67.11%), Query Frame = 3 
Query:  102 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN 548
            + KLL+IG+S VGK+  L R                  K++T+  + KRIKLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W   I+ ++ DN   IL GNK DM E +R V T +GQ L ++ G +FFETSAK N
Sbjct:   30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDM-EDERVVSTERGQRLGEQLGFEFFETSAKDN 177
The following BLAST results are available for this feature:
BLAST of EY744520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB15_MOUSE2.082e-3751.01Ras-related protein Rab-15 OS=Mus musculus GN=Rab1... [more]
RAB3_DROME2.719e-3751.01Ras-related protein Rab-3 OS=Drosophila melanogast... [more]
RAB3B_MOUSE3.551e-3751.68Ras-related protein Rab-3B OS=Mus musculus GN=Rab3... [more]
RAB3B_MESAU3.551e-3751.68Ras-related protein Rab-3B OS=Mesocricetus auratus... [more]
RAB3B_BOVIN3.551e-3751.68Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B ... [more]
RAB3B_RAT4.637e-3751.01Ras-related protein Rab-3B OS=Rattus norvegicus GN... [more]
RAB3_CAEEL7.910e-3750.34Ras-related protein Rab-3 OS=Caenorhabditis elegan... [more]
RAB3C_HUMAN2.301e-3651.01Ras-related protein Rab-3C OS=Homo sapiens GN=RAB3... [more]
RAB3C_BOVIN2.301e-3651.01Ras-related protein Rab-3C OS=Bos taurus GN=RAB3C ... [more]
RAB3C_RAT3.926e-3651.01Ras-related protein Rab-3C OS=Rattus norvegicus GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-009-E06-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744520 ID=EY744520; Name=EY744520; organism=Citrus sinensis; type=EST; length=1081bp
CCCACGCGTCCGCTCTCTCTCTTGATCTGCTTGTGAGATATAAATTTTGG
TTAATTGCTATGGCTGCTCCACCTGCAAGAGCCCGGGCTGATTACGATTA
CCTCATAAAGCTGCTCCTGATCGGCGACAGCGGTGTTGGTAAGAGTTGTC
TCCTTCTGCGATTCTCTGATGGTTCCTTTACTACCAGTTTTATTACAACC
ATTGGTATTGACTTCAAGATTAGGACCATAGAGCTTGATGGAAAACGAAT
TAAACTTCAAATATGGGATACTGCAGGTCAAGAGAGGTTTCGAACAATTA
CAACCGCATACTACCGAGGAGCCATGGGAATATTGCTCGTATATGATGTC
ACCGACGAGTCATCTTTCAACAACATTAGGAATTGGATCCGTAATATCGA
ACAGCATGCATCTGACAATGTAAACAAGATTCTGGTGGGTAACAAGGCCG
ACATGGACGAAAGCAAAAGGGCTGTCCCCACTTCAAAGGGCCAAGCTCTT
GCTGATGAATATGGCATCAAGTTCTTTGAAACTAGTGCCAAGACCAACCC
TAAATGTGGAGGAGGGTTTCTTTTCAATTGCCAGGGACCTCACGCAAGGG
CTTGCGCATCAGGAATTCTAGGGGCTGAGCCTCCAACTATTCCAATTTAA
CCCACCTCGACAGCACACGGGGGGGGCTGCCCAAGTTCGCCCAAAAATTC
CACTGGCCTGGGGCTTTTAACACAAACATTTAAGGGGAGAGAAATACAGG
GGCGCATTGTCACCGCGGCCGCCTTTTATGGTTCAGCAACCGATATATAT
GCTGAAAATAAAAAGCTTGCGCGGGTTTGGCTGGGAACCCTAGCCTCAAC
TTCCACCCACCCCCCCACCCGCCCTGCTCCTCGCGAAAGCCGCACCAAAC
TCGCCGCGGGACTCAGAGCCATCTCCCATGACAACACCTTGACCGGCCAC
CCGTCTTGTGACGCCTCCACTCACATCTCAGCCGGTCAGGTCGCGCGAAC
AAGAGAGGCCCGGACGTGCGGAGGACGAGCGAGACCGAAGAGAAGCATTG
TGCCTATCCTGCGACGTTCGCATGACGANAA
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