EY744514

Overview
NameEY744514
Unique NameEY744514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY744514 vs. ExPASy Swiss-Prot
Match: GLGA_PARUW (Glycogen synthase OS=Protochlamydia amoebophila (strain UWE25) GN=glgA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.327e-12
Identity = 48/133 (36.09%), Postives = 68/133 (51.13%), Query Frame = 2 
Query:   14 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDL----------SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILADDVQFVMLGS 382
            +D + TVS  Y+ E+ T + G GL   L   +    GI NGID + WNP  D  + +HYS+ ++            K   K  L+++L L      P+IG I RL  QKGIDLI+     I+    QF++LGS
Sbjct:  214 SDFVTTVSPNYAKEVLTPKEGRGLEATLVEYQHKFKGILNGIDYSYWNPEIDRFLPAHYSLREMPKNKKDRNTVDKKGFIKKILREKLYL-AEEHRPIIGCITRLVPQKGIDLIKHTIRHIVEKKGQFILLGS 345
The following BLAST results are available for this feature:
BLAST of EY744514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 351
Match NameE-valueIdentityDescription
GLGA_PARUW8.327e-1236.09Glycogen synthase OS=Protochlamydia amoebophila (s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-009-D12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744514 ID=EY744514; Name=EY744514; organism=Citrus sinensis; type=EST; length=868bp
CCACGCGTCCGCAGCTGATCGATTACTTACAGTGAGCAAGGGTTATTCAT
GGGAAATAACAACTGTTGAAGGTGGATATGGCTTACATGAGATATTAAGC
AGTCGAAAGAGTGTTCTGAATGGAATCACAAATGGCATTGATATAACCGA
GTGGAATCCATCTTCAGATGAGCACATTGCTTCCCATTATTCAATTGACG
ATCTCTCTGGAAAGGTTCAGTGCAAGATTGCTTTGCAGAAGGAACTTGGC
CTTCCCATTCGGCCTGATTGTCCCCTGATTGGATTTATTGGAAGACTGGA
TCACCAGAAAGGCATTGACCTGATTCGCTTGGCAGCCCCAGAGATCTTGG
CAGACGATGTTCAATTTGTCATGCTTGGTTCTGGGGATCCTCAATTTGAG
AGCTGGATGACAGACACGGAGGCAACTTACAAAGACAAGTATCGTGGTTG
GGTTGGATTCCCTGCGCCAATTTATCGAACCGATCCATGCTGGGCTACTC
ACAATTAGACTTCCCAGAACATGTGCCTAGGAGCGGCGAACCCGCGAATC
GAAAGCATAGAAAGGACACCAACACCACCACCAGCACCCGCCGTCCCAGC
CCCCACAGCGGCGGGACCTCGCACCACAACCCAGTACTGGCAAAAAGCAC
AAAGCCCAGCCCCCTCAACCCCAGCGAGACGCAAACGGGCCTGCCAAGCA
CACTGCACAAAACCCACGGGAGGAATCGCCACCACAGACCGCTAGCTCGG
ACAAAAAGCGGGAGTCAACCAGCGACCATAACGAGCAGACACAGTCAACG
CGACGGACCCAACACATCCAACAAGCCAAGACCACACCCCAGCCGCACCA
ACGAGCATTACCCACGCG
back to top