EY744506

Overview
NameEY744506
Unique NameEY744506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744506 vs. ExPASy Swiss-Prot
Match: IF4A_EMENI (ATP-dependent RNA helicase eIF4A OS=Emericella nidulans GN=tif1 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.581e-31
Identity = 60/99 (60.61%), Postives = 80/99 (80.81%), Query Frame = 1
Query:  151 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSTEVQALILSPTRELATQTEKVILAIGDFI 447
            E   SFD+M +K +LLRG+Y YGFE+PSAIQQRA++PI+KG DVIAQAQSGTGKT+  +++  Q +D +    QALI++PTRELA Q +KV++AIGDF+
Sbjct:   45 EITDSFDSMELKPELLRGVYAYGFERPSAIQQRAILPIVKGNDVIAQAQSGTGKTATFSISALQKLDPNVKACQALIVAPTRELAQQIQKVVIAIGDFM 143          

HSP 2 Score: 26.9498 bits (58), Expect = 8.581e-31
Identity = 10/22 (45.45%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  446 LNIRAPACVGGKSVGEDIRKLR 511
            +NI+  AC+GG +V +D+  LR
Sbjct:  143 MNIQCHACIGGTAVRDDMNALR 164          

HSP 3 Score: 21.557 bits (44), Expect = 8.581e-31
Identity = 9/19 (47.37%), Postives = 12/19 (63.16%), Query Frame = 3
Query:  516 GLDVVSGTPAAL*DMITRK 572
            G  +V GTP  + DMI R+
Sbjct:  166 GPQIVVGTPGRIHDMIQRR 184          
BLAST of EY744506 vs. ExPASy Swiss-Prot
Match: IF4A_ASPTN (ATP-dependent RNA helicase eIF4A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tif1 PE=3 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 1.116e-30
Identity = 61/95 (64.21%), Postives = 79/95 (83.16%), Query Frame = 1
Query:  163 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSTEVQALILSPTRELATQTEKVILAIGDFI 447
            SFD+M +K +LLRG+Y YGFE+PSAIQQRA+MPIIKG DVIAQAQSGTGKT+  +++  Q +D +    QALI++PTRELA Q +KV++AIGDF+
Sbjct:   24 SFDSMELKAELLRGVYAYGFERPSAIQQRAIMPIIKGNDVIAQAQSGTGKTATFSISALQKIDPNLKACQALIVAPTRELAQQIQKVVVAIGDFM 118          

HSP 2 Score: 25.409 bits (54), Expect = 1.116e-30
Identity = 8/22 (36.36%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  446 LNIRAPACVGGKSVGEDIRKLR 511
            +NI   AC+GG ++ +D++ L+
Sbjct:  118 MNINCHACIGGTAIRDDMKALQ 139          

HSP 3 Score: 21.9422 bits (45), Expect = 1.116e-30
Identity = 9/21 (42.86%), Postives = 13/21 (61.90%), Query Frame = 3
Query:  510 EHGLDVVSGTPAAL*DMITRK 572
            + G  +V GTP  + DMI R+
Sbjct:  139 QEGPPIVVGTPGRIQDMIQRR 159          
BLAST of EY744506 vs. ExPASy Swiss-Prot
Match: IF4A_ASPNC (ATP-dependent RNA helicase eIF4A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tif1 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.450e-30
Identity = 60/99 (60.61%), Postives = 77/99 (77.78%), Query Frame = 1
Query:  151 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSTEVQALILSPTRELATQTEKVILAIGDFI 447
            E   SFD+M +K +LLRG+Y YGFE+PSAIQQRA+ PII G DVIAQAQSGTGKT+  +++  Q +D      QALI++PTRELA Q +KV++AIGDF+
Sbjct:   22 EVTDSFDSMDLKPELLRGVYAYGFERPSAIQQRAIKPIIAGHDVIAQAQSGTGKTATFSISALQKIDQELKACQALIVAPTRELAQQIQKVVVAIGDFM 120          

HSP 2 Score: 28.1054 bits (61), Expect = 1.450e-30
Identity = 11/23 (47.83%), Postives = 16/23 (69.57%), Query Frame = 2
Query:  446 LNIRAPACVGGKSVGEDIRKLRA 514
            +NI   AC+GG +V +D+  LRA
Sbjct:  120 MNIECHACIGGTNVRDDMNALRA 142          

HSP 3 Score: 21.9422 bits (45), Expect = 1.450e-30
Identity = 10/19 (52.63%), Postives = 12/19 (63.16%), Query Frame = 3
Query:  516 GLDVVSGTPAAL*DMITRK 572
            G  VV GTP  + DMI R+
Sbjct:  143 GPQVVVGTPGRIHDMIERR 161          
BLAST of EY744506 vs. ExPASy Swiss-Prot
Match: IF4A_PHANO (ATP-dependent RNA helicase eIF4A OS=Phaeosphaeria nodorum GN=TIF1 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.612e-30
Identity = 63/99 (63.64%), Postives = 81/99 (81.82%), Query Frame = 1
Query:  151 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSTEVQALILSPTRELATQTEKVILAIGDFI 447
            E   SFDAM +K +LLRG+Y YGFE+PSAIQQRA+MP+IKG DVIAQAQSGTGKT+  +++  Q +D++    QALIL+PTRELA Q +KV++AIGDF+
Sbjct:   20 ETTDSFDAMNLKAELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISTLQKIDSNVKACQALILAPTRELAQQIQKVVVAIGDFM 118          

HSP 2 Score: 21.9422 bits (45), Expect = 1.612e-30
Identity = 10/21 (47.62%), Postives = 13/21 (61.90%), Query Frame = 3
Query:  510 EHGLDVVSGTPAAL*DMITRK 572
            + G  VV GTP  + DMI R+
Sbjct:  139 QDGPQVVVGTPGRVHDMIQRR 159          
BLAST of EY744506 vs. ExPASy Swiss-Prot
Match: IF4A2_RAT (Eukaryotic initiation factor 4A-II OS=Rattus norvegicus GN=Eif4a2 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.808e-29
Identity = 63/102 (61.76%), Postives = 81/102 (79.41%), Query Frame = 1
Query:  151 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSTEVQALILSPTRELATQTEKVILAIGDFIKHT 456
            E + +FD M +K+ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+  A+++ Q ++    E QAL+L+PTRELA Q +KVILA+GD++  T
Sbjct:   30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT 131          
BLAST of EY744506 vs. ExPASy Swiss-Prot
Match: IF4A2_PONAB (Eukaryotic initiation factor 4A-II OS=Pongo abelii GN=EIF4A2 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.808e-29
Identity = 63/102 (61.76%), Postives = 81/102 (79.41%), Query Frame = 1
Query:  151 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSTEVQALILSPTRELATQTEKVILAIGDFIKHT 456
            E + +FD M +K+ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+  A+++ Q ++    E QAL+L+PTRELA Q +KVILA+GD++  T
Sbjct:   30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT 131          
BLAST of EY744506 vs. ExPASy Swiss-Prot
Match: IF4A2_MOUSE (Eukaryotic initiation factor 4A-II OS=Mus musculus GN=Eif4a2 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.808e-29
Identity = 63/102 (61.76%), Postives = 81/102 (79.41%), Query Frame = 1
Query:  151 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSTEVQALILSPTRELATQTEKVILAIGDFIKHT 456
            E + +FD M +K+ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+  A+++ Q ++    E QAL+L+PTRELA Q +KVILA+GD++  T
Sbjct:   30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT 131          
BLAST of EY744506 vs. ExPASy Swiss-Prot
Match: IF4A2_MACFA (Eukaryotic initiation factor 4A-II OS=Macaca fascicularis GN=EIF4A2 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.808e-29
Identity = 63/102 (61.76%), Postives = 81/102 (79.41%), Query Frame = 1
Query:  151 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSTEVQALILSPTRELATQTEKVILAIGDFIKHT 456
            E + +FD M +K+ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+  A+++ Q ++    E QAL+L+PTRELA Q +KVILA+GD++  T
Sbjct:   31 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT 132          
BLAST of EY744506 vs. ExPASy Swiss-Prot
Match: IF4A2_HUMAN (Eukaryotic initiation factor 4A-II OS=Homo sapiens GN=EIF4A2 PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.808e-29
Identity = 63/102 (61.76%), Postives = 81/102 (79.41%), Query Frame = 1
Query:  151 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSTEVQALILSPTRELATQTEKVILAIGDFIKHT 456
            E + +FD M +K+ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+  A+++ Q ++    E QAL+L+PTRELA Q +KVILA+GD++  T
Sbjct:   30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT 131          
BLAST of EY744506 vs. ExPASy Swiss-Prot
Match: IF4A2_CHICK (Eukaryotic initiation factor 4A-II OS=Gallus gallus GN=EIF4A2 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.808e-29
Identity = 63/102 (61.76%), Postives = 81/102 (79.41%), Query Frame = 1
Query:  151 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSTEVQALILSPTRELATQTEKVILAIGDFIKHT 456
            E + +FD M +K+ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+  A+++ Q ++    E QAL+L+PTRELA Q +KVILA+GD++  T
Sbjct:   30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDLKETQALVLAPTRELAQQIQKVILALGDYMGAT 131          
The following BLAST results are available for this feature:
BLAST of EY744506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
IF4A_EMENI8.581e-3160.61ATP-dependent RNA helicase eIF4A OS=Emericella nid... [more]
IF4A_ASPTN1.116e-3064.21ATP-dependent RNA helicase eIF4A OS=Aspergillus te... [more]
IF4A_ASPNC1.450e-3060.61ATP-dependent RNA helicase eIF4A OS=Aspergillus ni... [more]
IF4A_PHANO1.612e-3063.64ATP-dependent RNA helicase eIF4A OS=Phaeosphaeria ... [more]
IF4A2_RAT1.808e-2961.76Eukaryotic initiation factor 4A-II OS=Rattus norve... [more]
IF4A2_PONAB1.808e-2961.76Eukaryotic initiation factor 4A-II OS=Pongo abelii... [more]
IF4A2_MOUSE1.808e-2961.76Eukaryotic initiation factor 4A-II OS=Mus musculus... [more]
IF4A2_MACFA1.808e-2961.76Eukaryotic initiation factor 4A-II OS=Macaca fasci... [more]
IF4A2_HUMAN1.808e-2961.76Eukaryotic initiation factor 4A-II OS=Homo sapiens... [more]
IF4A2_CHICK1.808e-2961.76Eukaryotic initiation factor 4A-II OS=Gallus gallu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-009-D04-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744506 ID=EY744506; Name=EY744506; organism=Citrus sinensis; type=EST; length=975bp
CCACGCGTCCGCTCTCATTGATTCTTTGATTTCGAAGAGTAATTGTTGCG
AATTTCGTGCGAGATGGCGGCGGCGACGGCTATGCGGAGGAGAGGAGGGG
GCGGCGGAATGGATGACGACAAGATGGTGTTCGAAACAACGGAAGGAGTG
GAGGCAATCACGAGCTTCGACGCAATGGGAATAAAAGACGATCTGTTGCG
TGGAATTTATCAGTACGGATTCGAGAAGCCATCGGCCATACAACAGAGGG
CCGTTATGCCAATAATAAAGGGCCGTGATGTAATTGCACAGGCCCAGTCT
GGTACTGGCAAGACCTCTATGATTGCCCTAACTGTTTGCCAGACGGTCGA
TACTTCTAGCACAGAGGTGCAGGCGTTGATTTTGTCACCTACGAGGGAGT
TGGCGACGCAGACAGAGAAAGTGATTTTGGCAATTGGTGATTTTATTAAA
CATACGAGCACCTGCGTGTGTTGGAGGCAAAAGTGTCGGGGAAGATATTA
GGAAGTTAAGAGCATGGACTTGATGTGGTGTCTGGAACTCCTGCTGCACT
CTGAGATATGATAACCAGGAAACCTTTTGCCGTACCTACACTTATTAATT
TATTTGGAGCCTCCCTACAACCCCCATCATGTGCTGACGCAACAGGTCCC
TGGAGAAACCTCTTCATAGGTGCCTGCCAAATTTCACCCAAATCTTTCCG
GGCAGTATCACCACAACCACGGCCCTTCTTCTTCATCCCATTGGCACACG
ACCTACCACCTCCAAAAAACCACCATCGCTCAAAAAAATCTCGGGCCAAA
ACCCGCTACGTGTACCTTTTTTAATGCGCCCCACCACCCTACTCTTCTAG
TCCTGGTCTGGGCGAGCTAGAATCAGCACGCCCGGTCCATCTATTAACTC
CCCCGATACTACATTCTATTCTATTTCCGCTACACACCACAGCAACGCAA
ACAACCAGCAACTCTACTGACTCCG
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