EY744470

Overview
NameEY744470
Unique NameEY744470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1035
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_PONAB (Signal recognition particle 54 kDa protein OS=Pongo abelii GN=SRP54 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 3.004e-46
Identity = 92/142 (64.79%), Postives = 107/142 (75.35%), Query Frame = 2
Query:   14 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +K AYY+Q+KGWK  L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A  PD +++VMD+SIG             V   +VIVTK DG+  GG AL
Sbjct:  119 SKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGAL 260          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_MACFA (Signal recognition particle 54 kDa protein OS=Macaca fascicularis GN=SRP54 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 3.004e-46
Identity = 92/142 (64.79%), Postives = 107/142 (75.35%), Query Frame = 2
Query:   14 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +K AYY+Q+KGWK  L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A  PD +++VMD+SIG             V   +VIVTK DG+  GG AL
Sbjct:  119 SKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGAL 260          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_HUMAN (Signal recognition particle 54 kDa protein OS=Homo sapiens GN=SRP54 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 3.004e-46
Identity = 92/142 (64.79%), Postives = 107/142 (75.35%), Query Frame = 2
Query:   14 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +K AYY+Q+KGWK  L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A  PD +++VMD+SIG             V   +VIVTK DG+  GG AL
Sbjct:  119 SKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGAL 260          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_CANFA (Signal recognition particle 54 kDa protein OS=Canis familiaris GN=SRP54 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 3.004e-46
Identity = 92/142 (64.79%), Postives = 107/142 (75.35%), Query Frame = 2
Query:   14 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +K AYY+Q+KGWK  L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A  PD +++VMD+SIG             V   +VIVTK DG+  GG AL
Sbjct:  119 SKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGAL 260          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_BOVIN (Signal recognition particle 54 kDa protein OS=Bos taurus GN=SRP54 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 3.004e-46
Identity = 92/142 (64.79%), Postives = 107/142 (75.35%), Query Frame = 2
Query:   14 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +K AYY+Q+KGWK  L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A  PD +++VMD+SIG             V   +VIVTK DG+  GG AL
Sbjct:  119 SKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGAL 260          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_RAT (Signal recognition particle 54 kDa protein OS=Rattus norvegicus GN=Srp54 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.924e-46
Identity = 92/142 (64.79%), Postives = 107/142 (75.35%), Query Frame = 2
Query:   14 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +K AY++Q+KGWK  L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QVS A  PD +++VMD+SIG             V   +VIVTK DG+  GG AL
Sbjct:  119 SKLAYFYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGAL 260          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_DICDI (Signal recognition particle 54 kDa protein OS=Dictyostelium discoideum GN=srp54 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.910e-41
Identity = 83/144 (57.64%), Postives = 104/144 (72.22%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            S TK AY+++KKG+  A+VCADTFRAGAFDQ++ NA KAKI +YGS TE DPV +A  GV+ FKK+  ++IIVDTSGRHKQ++ LFEEM+Q+  A  PD  IFVMDSSIG            SV  G++I+TK DGN  GG A+
Sbjct:  117 SVTKLAYFYKKKGFSTAIVCADTFRAGAFDQVRHNAAKAKIHYYGSETEKDPVVVARTGVDIFKKDGTEIIIVDTSGRHKQDSELFEEMKQIETAVKPDNCIFVMDSSIGQAAYEQATAFRSSVKVGSIIITKMDGNSMGGGAI 260          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_YARLI (Signal recognition particle 54 kDa protein homolog OS=Yarrowia lipolytica GN=SRP54 PE=3 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 1.444e-40
Identity = 83/144 (57.64%), Postives = 103/144 (71.53%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            S TK A Y+Q++G+K  LVCADTFRAGAFDQLKQNATKAKIPF+GSYTE+DPV +A EGV  FKKE  ++IIVDTSGRH+QE+ LF EM  +  A  PD  I V+D+SIG            +   G++I+TK DG+  GG A+
Sbjct:  119 SCTKLAVYYQRRGFKVGLVCADTFRAGAFDQLKQNATKAKIPFFGSYTETDPVAVAAEGVAKFKKEKFEIIIVDTSGRHRQESELFTEMVDIGAAVKPDSTIMVLDASIGQAAEPQSRAFKDASDFGSIILTKMDGHAKGGGAI 262          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_ASPNG (Signal recognition particle 54 kDa protein homolog OS=Aspergillus niger GN=srpA PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.444e-40
Identity = 83/142 (58.45%), Postives = 101/142 (71.13%), Query Frame = 2
Query:   14 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            TK A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP  +A EGV  FKKE  ++IIVDTSGRHKQE  LF EM Q+  A  PD  I V+DS+IG            +   GA+I+TKTDG+  GG A+
Sbjct:  120 TKLARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAAEGVAKFKKERFEIIIVDTSGRHKQEEELFTEMTQIQTAVTPDQTILVLDSTIGQAAEAQSSAFKATADFGAIIITKTDGHAAGGGAI 261          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_CANAL (Signal recognition particle 54 kDa protein homolog OS=Candida albicans GN=SRP54 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 5.488e-40
Identity = 84/144 (58.33%), Postives = 101/144 (70.14%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            S TK A Y++K+G+K  LVCADTFRAGAFDQLKQNA KA IP+YGSY E DPV+IA EGV+ FK+E  D+IIVDTSGRH+QE  LF EM Q+ EA  P   I VMD SIG            S + G++I+TK DG+  GG A+
Sbjct:  134 SCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYYGSYLEPDPVKIAFEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAVQPTQTIMVMDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAI 277          
The following BLAST results are available for this feature:
BLAST of EY744470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
SRP54_PONAB3.004e-4664.79Signal recognition particle 54 kDa protein OS=Pong... [more]
SRP54_MACFA3.004e-4664.79Signal recognition particle 54 kDa protein OS=Maca... [more]
SRP54_HUMAN3.004e-4664.79Signal recognition particle 54 kDa protein OS=Homo... [more]
SRP54_CANFA3.004e-4664.79Signal recognition particle 54 kDa protein OS=Cani... [more]
SRP54_BOVIN3.004e-4664.79Signal recognition particle 54 kDa protein OS=Bos ... [more]
SRP54_RAT3.924e-4664.79Signal recognition particle 54 kDa protein OS=Ratt... [more]
SRP54_DICDI2.910e-4157.64Signal recognition particle 54 kDa protein OS=Dict... [more]
SRP54_YARLI1.444e-4057.64Signal recognition particle 54 kDa protein homolog... [more]
SRP54_ASPNG1.444e-4058.45Signal recognition particle 54 kDa protein homolog... [more]
SRP54_CANAL5.488e-4058.33Signal recognition particle 54 kDa protein homolog... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-H12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744470 ID=EY744470; Name=EY744470; organism=Citrus sinensis; type=EST; length=1035bp
CCACGCGTCCGGTACAAAATATGCTTATTATCATCAAAAGAAAGGTTGGA
AACCGGCTTTAGTCTGTGCTGATACATTCAGAGCTGGTGCTTTTGATCAG
TTGAAGCAGAATGCCACCAAAGCTAAGATTCCATTTTATGGAAGCTACAC
AGAGTCTGATCCTGTGAGAATTGCAGTGGAAGGTGTGGAAACATTTAAAA
AGGAAAACTGTGATCTCATAATTGTTGATACCAGTGGTCGCCATAAACAG
GAAGCTGCTCTTTTTGAAGAGATGCGTCAAGTTTCTGAAGCAACGAATCC
AGATCTTGTTATATTTGTTATGGATAGCAGTATTGGTCAAGCCGCATTTG
ATCAAGCTCAAGCATTCAAGCAAAGTGTTTCTGCTGGAGCTGTGATTGTT
ACTAAAACGGATGGCAATGGGTGGGGTGGGGAAGCTCTTCGCGCCCACGC
CGCCCCCGCGCACTCCCCAGACCACCCCCAGCCGAGCGCAGACGTCTCAG
GGCCTGGTGCTCGCGCCGGCCAAAGGCCCCCCACCGATCACCTAAGCACG
AGAAGCTCGTCAAAGCGCTCCTCACAAAACAAAGGCCCCCACCCGAACCA
CGCCCCACACCCGCCGGGCCGCAACGGCGTACACTGCTCCCCACCAACCC
ACGGTCGGTCGTAACCCACGAAGACAGAACACCACAAAGACCACGGACAG
GCGACCGCAGCGACCGAAACCCTCGGTCCGCACGCGCCCGGCGCGCGACC
GCGCGCGCGCCGCGCACCCCCCAGCGGGCCTGCAGACCGACAGCGCCCAC
ACAGACGCGGCGGCGCGCACCGCAGCACGACAGCGCAAGGCGCCACACCC
CAGCTGAGCCGCCGCCGCCCGCAGGACGGGCCGCCCAACGCCTCGCGCCC
CTCCCCCCCGTCACGACACCTCCGCGGCGCCACCGATCCACCCTGCACCC
GCGGCCACGAGCCCCCGCCGCCCACCTCGGTGCAGCCGCTCGCCCCCGCC
CANCGACCCCCACCCCGGCTGCCGCCGCTGTGCCC
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