EY744470

Overview
NameEY744470
Unique NameEY744470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1035
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_PYRAB (Signal recognition 54 kDa protein OS=Pyrococcus abyssi GN=srp54 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.454e-26
Identity = 63/141 (44.68%), Postives = 84/141 (59.57%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K A + QK+G+K  +VC+DT+R GA+ QLKQ      I  +G   E D +++A EGVE FK +  DLIIVDT+GRHK+E  L EEMR +S    P  VI V+D +IG            +   G++IVTK D +  GG AL
Sbjct:  119 KLARHFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNEKDAIKLAKEGVEHFKAKGVDLIIVDTAGRHKEEKDLIEEMRMISNEIKPHEVILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDSSAKGGGAL 259          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_STAMF (Signal recognition 54 kDa protein OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=srp54 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.891e-26
Identity = 60/144 (41.67%), Postives = 84/144 (58.33%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +  K AYY++ +G++  LV ADT+R  A+DQLKQ   +  +P YG     D V IA  GVE F     D++IVDT+GRH +E  L  EMR+++E   PD V+ V+D++IG            +   G++IVTK DG   GG AL
Sbjct:  113 TAAKLAYYYKLEGYRVGLVAADTYRPAAYDQLKQLGEQIGVPVYGEPDNKDAVEIARRGVEYFVSRGFDIVIVDTAGRHHREEDLLREMREIAENIKPDEVVLVIDAAIGQQAHDLAKKFHEATPIGSIIVTKLDGTAKGGGAL 256          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_PYRIL (Signal recognition 54 kDa protein OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=srp54 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.239e-25
Identity = 63/144 (43.75%), Postives = 84/144 (58.33%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +  K A Y  K+G++  LV  DT R  AFDQLKQ A K  +PFYG     D V IA  GV+ FK  N D++I+DT+GRHK E AL +E++ + EA NPD VI V+D+++G             +   +VI+TK D    GG AL
Sbjct:  115 TAAKLARYLVKRGYRVGLVETDTIRPAAFDQLKQLAEKIGVPFYGERDSKDAVEIARRGVQNFK--NMDVVIIDTAGRHKNEEALLQEVKMIYEAVNPDEVILVIDATVGKLAAAQAEAFMKYLPIHSVIITKMDSTARGGGAL 256          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_METM7 (Signal recognition 54 kDa protein OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=srp54 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.239e-25
Identity = 64/146 (43.84%), Postives = 88/146 (60.27%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVS-AGAVIVTKTDGNGWGGEAL 439
            S  K A Y QKKG +P L+ AD +R  A+ QLKQ + K  +P +G  T +  PV I  EG+E  KK   D+II+DT+GRHK+E  L  EMR++ + TNP  +I V+D ++G            SVS  G+++VTK DG+  GG AL
Sbjct:  116 SAAKLARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGMEKLKK--VDVIIIDTAGRHKEEEGLLAEMREMKDLTNPTEIILVIDGTLGQQAKNQAKAFKESVSEIGSILVTKLDGSAKGGGAL 259          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_SULIY (Signal recognition 54 kDa protein OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=srp54 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.924e-25
Identity = 60/143 (41.96%), Postives = 86/143 (60.14%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRH--KQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K AY+++++G+K  LV AD +R  A+DQL Q   +  +P YG     + + IA +GV+TF K   D+IIVDT+GRH   +E  L EEM+++ EA  PD VI V+D+SIG            +   G++I+TK DG   GG AL
Sbjct:  115 KLAYFYKRRGYKVGLVAADVYRPAAYDQLLQLGNQIGVPVYGEPNNQNAIEIAKKGVDTFVKNKMDIIIVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSIIITKMDGTAKGGGAL 257          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_SULIN (Signal recognition 54 kDa protein OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=srp54 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.924e-25
Identity = 60/143 (41.96%), Postives = 86/143 (60.14%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRH--KQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K AY+++++G+K  LV AD +R  A+DQL Q   +  +P YG     + + IA +GV+TF K   D+IIVDT+GRH   +E  L EEM+++ EA  PD VI V+D+SIG            +   G++I+TK DG   GG AL
Sbjct:  115 KLAYFYKRRGYKVGLVAADVYRPAAYDQLLQLGNQIGVPVYGEPNNQNAIEIAKKGVDTFVKNKMDIIIVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSIIITKMDGTAKGGGAL 257          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_SULIM (Signal recognition 54 kDa protein OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=srp54 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.924e-25
Identity = 60/143 (41.96%), Postives = 86/143 (60.14%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRH--KQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K AY+++++G+K  LV AD +R  A+DQL Q   +  +P YG     + + IA +GV+TF K   D+IIVDT+GRH   +E  L EEM+++ EA  PD VI V+D+SIG            +   G++I+TK DG   GG AL
Sbjct:  115 KLAYFYKRRGYKVGLVAADVYRPAAYDQLLQLGNQIGVPVYGEPNNQNAIEIAKKGVDTFVKNKMDIIIVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSIIITKMDGTAKGGGAL 257          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_SULIL (Signal recognition 54 kDa protein OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=srp54 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.924e-25
Identity = 60/143 (41.96%), Postives = 86/143 (60.14%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRH--KQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K AY+++++G+K  LV AD +R  A+DQL Q   +  +P YG     + + IA +GV+TF K   D+IIVDT+GRH   +E  L EEM+++ EA  PD VI V+D+SIG            +   G++I+TK DG   GG AL
Sbjct:  115 KLAYFYKRRGYKVGLVAADVYRPAAYDQLLQLGNQIGVPVYGEPNNQNAIEIAKKGVDTFVKNKMDIIIVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSIIITKMDGTAKGGGAL 257          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_SULIK (Signal recognition 54 kDa protein OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=srp54 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.924e-25
Identity = 60/143 (41.96%), Postives = 86/143 (60.14%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRH--KQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K AY+++++G+K  LV AD +R  A+DQL Q   +  +P YG     + + IA +GV+TF K   D+IIVDT+GRH   +E  L EEM+++ EA  PD VI V+D+SIG            +   G++I+TK DG   GG AL
Sbjct:  115 KLAYFYKRRGYKVGLVAADVYRPAAYDQLLQLGNQIGVPVYGEPNNQNAIEIAKKGVDTFVKNKMDIIIVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSIIITKMDGTAKGGGAL 257          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_SULIA (Signal recognition 54 kDa protein OS=Sulfolobus islandicus (strain M.16.27) GN=srp54 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.924e-25
Identity = 60/143 (41.96%), Postives = 86/143 (60.14%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRH--KQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K AY+++++G+K  LV AD +R  A+DQL Q   +  +P YG     + + IA +GV+TF K   D+IIVDT+GRH   +E  L EEM+++ EA  PD VI V+D+SIG            +   G++I+TK DG   GG AL
Sbjct:  115 KLAYFYKRRGYKVGLVAADVYRPAAYDQLLQLGNQIGVPVYGEPNNQNAIEIAKKGVDTFVKNKMDIIIVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSIIITKMDGTAKGGGAL 257          
The following BLAST results are available for this feature:
BLAST of EY744470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
SRP54_PYRAB3.454e-2644.68Signal recognition 54 kDa protein OS=Pyrococcus ab... [more]
SRP54_STAMF5.891e-2641.67Signal recognition 54 kDa protein OS=Staphylotherm... [more]
SRP54_PYRIL2.239e-2543.75Signal recognition 54 kDa protein OS=Pyrobaculum i... [more]
SRP54_METM72.239e-2543.84Signal recognition 54 kDa protein OS=Methanococcus... [more]
SRP54_SULIY2.924e-2541.96Signal recognition 54 kDa protein OS=Sulfolobus is... [more]
SRP54_SULIN2.924e-2541.96Signal recognition 54 kDa protein OS=Sulfolobus is... [more]
SRP54_SULIM2.924e-2541.96Signal recognition 54 kDa protein OS=Sulfolobus is... [more]
SRP54_SULIL2.924e-2541.96Signal recognition 54 kDa protein OS=Sulfolobus is... [more]
SRP54_SULIK2.924e-2541.96Signal recognition 54 kDa protein OS=Sulfolobus is... [more]
SRP54_SULIA2.924e-2541.96Signal recognition 54 kDa protein OS=Sulfolobus is... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-H12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744470 ID=EY744470; Name=EY744470; organism=Citrus sinensis; type=EST; length=1035bp
CCACGCGTCCGGTACAAAATATGCTTATTATCATCAAAAGAAAGGTTGGA
AACCGGCTTTAGTCTGTGCTGATACATTCAGAGCTGGTGCTTTTGATCAG
TTGAAGCAGAATGCCACCAAAGCTAAGATTCCATTTTATGGAAGCTACAC
AGAGTCTGATCCTGTGAGAATTGCAGTGGAAGGTGTGGAAACATTTAAAA
AGGAAAACTGTGATCTCATAATTGTTGATACCAGTGGTCGCCATAAACAG
GAAGCTGCTCTTTTTGAAGAGATGCGTCAAGTTTCTGAAGCAACGAATCC
AGATCTTGTTATATTTGTTATGGATAGCAGTATTGGTCAAGCCGCATTTG
ATCAAGCTCAAGCATTCAAGCAAAGTGTTTCTGCTGGAGCTGTGATTGTT
ACTAAAACGGATGGCAATGGGTGGGGTGGGGAAGCTCTTCGCGCCCACGC
CGCCCCCGCGCACTCCCCAGACCACCCCCAGCCGAGCGCAGACGTCTCAG
GGCCTGGTGCTCGCGCCGGCCAAAGGCCCCCCACCGATCACCTAAGCACG
AGAAGCTCGTCAAAGCGCTCCTCACAAAACAAAGGCCCCCACCCGAACCA
CGCCCCACACCCGCCGGGCCGCAACGGCGTACACTGCTCCCCACCAACCC
ACGGTCGGTCGTAACCCACGAAGACAGAACACCACAAAGACCACGGACAG
GCGACCGCAGCGACCGAAACCCTCGGTCCGCACGCGCCCGGCGCGCGACC
GCGCGCGCGCCGCGCACCCCCCAGCGGGCCTGCAGACCGACAGCGCCCAC
ACAGACGCGGCGGCGCGCACCGCAGCACGACAGCGCAAGGCGCCACACCC
CAGCTGAGCCGCCGCCGCCCGCAGGACGGGCCGCCCAACGCCTCGCGCCC
CTCCCCCCCGTCACGACACCTCCGCGGCGCCACCGATCCACCCTGCACCC
GCGGCCACGAGCCCCCGCCGCCCACCTCGGTGCAGCCGCTCGCCCCCGCC
CANCGACCCCCACCCCGGCTGCCGCCGCTGTGCCC
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