EY744470

Overview
NameEY744470
Unique NameEY744470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1035
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_METMP (Signal recognition 54 kDa protein OS=Methanococcus maripaludis GN=srp54 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.924e-25
Identity = 63/146 (43.15%), Postives = 89/146 (60.96%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVS-AGAVIVTKTDGNGWGGEAL 439
            S  K A Y QKKG +P L+ AD +R  A+ QLKQ + K  +P +G  T +  PV I  EG+E  KK   D+II+DT+GRHK+E  L  EM+++ + TNP+ +I V+D ++G            SVS  G+++VTK DG+  GG AL
Sbjct:  116 SAAKLARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGMEKLKK--VDVIIIDTAGRHKEEEGLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKESVSEIGSILVTKLDGSAKGGGAL 259          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_METM5 (Signal recognition 54 kDa protein OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=srp54 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.818e-25
Identity = 63/146 (43.15%), Postives = 90/146 (61.64%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVS-AGAVIVTKTDGNGWGGEAL 439
            S  K A Y QKKG +P L+ AD +R  A+ QLKQ + K  +P +G  T +  PV I  EG+E  KK   D+II+DT+GRHK+E +L  EM+++ + TNP+ +I V+D ++G            SVS  G+++VTK DG+  GG AL
Sbjct:  116 SAAKLARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVDITKEGMEKLKK--VDVIIIDTAGRHKEEESLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKESVSEIGSILVTKLDGSAKGGGAL 259          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_ACIAM (Signal recognition 54 kDa protein (Fragment) OS=Acidianus ambivalens GN=srp54 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 3.818e-25
Identity = 64/143 (44.76%), Postives = 84/143 (58.74%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRH--KQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K AY+++KKG+K  LV AD +R  A +QL+Q   +  +P YG   E D V IA  GVE F  E  ++IIVDT+GRH   +EAAL EEM+ + EA  PD V  V+D+SIG            +   G +I+TK DG   GG AL
Sbjct:  117 KLAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEKDAVGIAKRGVEKFLSEKMEIIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASIGQKAYDLASKFNQASKIGTIIITKMDGTAKGGGAL 259          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_METM6 (Signal recognition 54 kDa protein OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=srp54 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.987e-25
Identity = 63/146 (43.15%), Postives = 89/146 (60.96%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVS-AGAVIVTKTDGNGWGGEAL 439
            S  K A Y QKKG +P L+ AD +R  A+ QLKQ + K  +P +G  T +  PV I  EG+E  KK   D+II+DT+GRHK+E  L  EM+++ + TNP+ +I V+D ++G            SVS  G+++VTK DG+  GG AL
Sbjct:  116 SAAKLARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVDITKEGMEKLKK--VDVIIIDTAGRHKEEEGLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKDSVSEIGSILVTKLDGSAKGGGAL 259          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_HYPBU (Signal recognition 54 kDa protein OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=srp54 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.987e-25
Identity = 60/143 (41.96%), Postives = 88/143 (61.54%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRH--KQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K A +++  G++  +V ADT+R GA++QLKQ A +A   FYG     DPV IA  GVE  K+   D++IVDT+GRH   +E AL +EM++++EA  PD V+ V+D+++G            +   G++IVTK DG   GG AL
Sbjct:  117 KLAKFYRGMGYRVGVVAADTYRPGAYEQLKQLADRAGAMFYGEPGSKDPVGIARRGVEELKQRGADIVIVDTAGRHGYGEEEALLDEMKRIAEAIKPDEVVLVIDAAMGQKSYDLAKRFHEATPVGSIIVTKMDGTAKGGGAL 259          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_METBU (Signal recognition 54 kDa protein OS=Methanococcoides burtonii (strain DSM 6242) GN=srp54 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.513e-25
Identity = 60/142 (42.25%), Postives = 79/142 (55.63%), Query Frame = 2
Query:   14 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +K + Y Q+KG KPA++CADTFR GA+ QLK    K  +PFYG     D V I   G+    K   D++IVDT+GRH  EA L +EM Q+ E   PD  + V+D +IG            SV    V+++K DG   GG AL
Sbjct:  115 SKLSRYFQRKGLKPAVICADTFRPGAYQQLKTLCDKLNVPFYGEVGNPDAVGIVERGLAELGKN--DVLIVDTAGRHSLEADLIDEMEQIHEIAQPDYKLLVLDGAIGQQASEQARAFNDSVGISGVVISKLDGTAKGGGAL 254          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_META3 (Signal recognition 54 kDa protein OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=srp54 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.111e-24
Identity = 61/146 (41.78%), Postives = 93/146 (63.70%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSV-SAGAVIVTKTDGNGWGGEAL 439
            S  K A   QK+G+KPAL+ AD +R  A+ QLKQ + K  IP +G  T++  P+ I  EG++ FKK   D+II+DT+GRHK+E+ L EEM+++ E  NP+ +I V+D ++G            +V + G++++TK DG+  GG AL
Sbjct:  116 SAAKLARTLQKRGFKPALIAADVYRPAAYQQLKQLSEKIHIPLHGDPTKTKTPMEITEEGLKQFKKN--DVIIIDTAGRHKEESGLLEEMKEMKEKFNPEEIILVIDGTLGQQAKNQAKAFKDAVENIGSILITKMDGSAKGGGAL 259          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_HALVO (Signal recognition 54 kDa protein OS=Halobacterium volcanii GN=srp54 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.111e-24
Identity = 59/144 (40.97%), Postives = 85/144 (59.03%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +  K A++  KKG +PA++  DTFR GA+DQ KQ   +A++ FYG     DPV+IA EG+E    E+ D+ IVDT+GRH  E  L +E+ ++     PDL + V+D++IG            S+  G V++TK DG   GG AL
Sbjct:  113 TSAKMAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEA--TEDADVHIVDTAGRHALEDDLIDEIEEIEGVVQPDLNLLVLDAAIGQGAKEQAQQFDESIGIGGVVITKLDGTAKGGGAL 254          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_PYRAE (Signal recognition 54 kDa protein OS=Pyrobaculum aerophilum GN=srp54 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.475e-24
Identity = 62/144 (43.06%), Postives = 84/144 (58.33%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +  K A Y  K+G+K  LV  DT R  AFDQL+Q A K  +PFYG     D V IA  GV+ FK  N D+IIVDT+GRH+ E AL +E+R + +A +PD V+ V+D+++G             +   +VI+TK D    GG AL
Sbjct:  115 TAAKLAKYLAKRGYKVGLVETDTIRPAAFDQLRQLAEKIGVPFYGERDGKDAVEIAKRGVQNFK--NMDVIIVDTAGRHRNEEALLKEVRAIYDAVSPDEVVLVIDATVGKMAAAQAEAFMKYLPIHSVIITKMDSTARGGGAL 256          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_SULSO (Signal recognition 54 kDa protein OS=Sulfolobus solfataricus GN=srp54 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.514e-24
Identity = 59/143 (41.26%), Postives = 84/143 (58.74%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRH--KQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K AY+++K+G+K  LV AD +R  A+DQL Q   +  +  YG     +P+ IA +GV+ F K   D+IIVDT+GRH   +E  L EEM+++ +   PD VI V+D+SIG            +   G+VI+TK DG   GG AL
Sbjct:  115 KLAYFYKKRGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAKKGVDIFVKNKMDIIIVDTAGRHGYGEETKLLEEMKEMYDVLKPDDVILVIDASIGQKAYDLASRFHQASPIGSVIITKMDGTAKGGGAL 257          
The following BLAST results are available for this feature:
BLAST of EY744470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
SRP54_METMP2.924e-2543.15Signal recognition 54 kDa protein OS=Methanococcus... [more]
SRP54_METM53.818e-2543.15Signal recognition 54 kDa protein OS=Methanococcus... [more]
SRP54_ACIAM3.818e-2544.76Signal recognition 54 kDa protein (Fragment) OS=Ac... [more]
SRP54_METM64.987e-2543.15Signal recognition 54 kDa protein OS=Methanococcus... [more]
SRP54_HYPBU4.987e-2541.96Signal recognition 54 kDa protein OS=Hyperthermus ... [more]
SRP54_METBU6.513e-2542.25Signal recognition 54 kDa protein OS=Methanococcoi... [more]
SRP54_META31.111e-2441.78Signal recognition 54 kDa protein OS=Methanococcus... [more]
SRP54_HALVO1.111e-2440.97Signal recognition 54 kDa protein OS=Halobacterium... [more]
SRP54_PYRAE2.475e-2443.06Signal recognition 54 kDa protein OS=Pyrobaculum a... [more]
SRP54_SULSO5.514e-2441.26Signal recognition 54 kDa protein OS=Sulfolobus so... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-H12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744470 ID=EY744470; Name=EY744470; organism=Citrus sinensis; type=EST; length=1035bp
CCACGCGTCCGGTACAAAATATGCTTATTATCATCAAAAGAAAGGTTGGA
AACCGGCTTTAGTCTGTGCTGATACATTCAGAGCTGGTGCTTTTGATCAG
TTGAAGCAGAATGCCACCAAAGCTAAGATTCCATTTTATGGAAGCTACAC
AGAGTCTGATCCTGTGAGAATTGCAGTGGAAGGTGTGGAAACATTTAAAA
AGGAAAACTGTGATCTCATAATTGTTGATACCAGTGGTCGCCATAAACAG
GAAGCTGCTCTTTTTGAAGAGATGCGTCAAGTTTCTGAAGCAACGAATCC
AGATCTTGTTATATTTGTTATGGATAGCAGTATTGGTCAAGCCGCATTTG
ATCAAGCTCAAGCATTCAAGCAAAGTGTTTCTGCTGGAGCTGTGATTGTT
ACTAAAACGGATGGCAATGGGTGGGGTGGGGAAGCTCTTCGCGCCCACGC
CGCCCCCGCGCACTCCCCAGACCACCCCCAGCCGAGCGCAGACGTCTCAG
GGCCTGGTGCTCGCGCCGGCCAAAGGCCCCCCACCGATCACCTAAGCACG
AGAAGCTCGTCAAAGCGCTCCTCACAAAACAAAGGCCCCCACCCGAACCA
CGCCCCACACCCGCCGGGCCGCAACGGCGTACACTGCTCCCCACCAACCC
ACGGTCGGTCGTAACCCACGAAGACAGAACACCACAAAGACCACGGACAG
GCGACCGCAGCGACCGAAACCCTCGGTCCGCACGCGCCCGGCGCGCGACC
GCGCGCGCGCCGCGCACCCCCCAGCGGGCCTGCAGACCGACAGCGCCCAC
ACAGACGCGGCGGCGCGCACCGCAGCACGACAGCGCAAGGCGCCACACCC
CAGCTGAGCCGCCGCCGCCCGCAGGACGGGCCGCCCAACGCCTCGCGCCC
CTCCCCCCCGTCACGACACCTCCGCGGCGCCACCGATCCACCCTGCACCC
GCGGCCACGAGCCCCCGCCGCCCACCTCGGTGCAGCCGCTCGCCCCCGCC
CANCGACCCCCACCCCGGCTGCCGCCGCTGTGCCC
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