EY744470
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_METBF (Signal recognition 54 kDa protein OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=srp54 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 6.740e-22 Identity = 61/144 (42.36%), Postives = 75/144 (52.08%), Query Frame = 2 Query: 8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439 S K A Y Q+KG K +V ADTFR GA+ QLK K + FYG D V I G++ +K D+ IVDT+GRH EA L EEM Q++ PD V+D+ IG SV VI+TK DG GG AL Sbjct: 113 STAKLARYFQRKGLKAGVVAADTFRPGAYHQLKTLCEKLNVAFYGEENNPDAVEITRNGLKALEKY--DVKIVDTAGRHALEADLIEEMEQINAVAKPDHKFMVLDAGIGQQASQQAHAFNDSVGITGVIITKLDGTAKGGGAL 254
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_PYRAR (Signal recognition 54 kDa protein OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=srp54 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.803e-22 Identity = 57/144 (39.58%), Postives = 79/144 (54.86%), Query Frame = 2 Query: 8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439 + K A Y K+G+K +V DT R AFDQL+Q A K PFYG D V IA GV K D++I+DT+GRH+ E AL +E++ + +A NPD V+ V+D+++G + VI+TK D GG AL Sbjct: 115 TSAKLARYLMKRGYKVGMVETDTIRPAAFDQLRQLAEKIGAPFYGERDGKDAVEIARRGVANLK--GVDVLIIDTAGRHRNEEALLQEVKAIYDAVNPDEVVLVVDATVGKLAAAQAEAFMKYLPIHTVIITKMDSTARGGGAL 256
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_METAC (Signal recognition 54 kDa protein OS=Methanosarcina acetivorans GN=srp54 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.803e-22 Identity = 61/144 (42.36%), Postives = 75/144 (52.08%), Query Frame = 2 Query: 8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439 S K A Y Q+KG K +V ADTFR GA+ QLK A K + FYG D V I G++ +K D+ IVDT+GRH EA L EEM ++ PD V+D+ IG SV VI+TK DG GG AL Sbjct: 113 SAAKLARYFQRKGLKAGVVAADTFRPGAYHQLKTLAEKLNVGFYGEEGNPDAVEITKNGLKALEKY--DIRIVDTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSVGITGVIITKLDGTAKGGGAL 254
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_METTP (Signal recognition 54 kDa protein OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=srp54 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.150e-21 Identity = 58/144 (40.28%), Postives = 80/144 (55.56%), Query Frame = 2 Query: 8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439 + K A Y Q++G + A++CADTFRAGA+DQLK + I FYG + +A G+E KK D+ IVDT+GRH E+ L +EM+ + N D + VMD++IG +V VI+TK DG GG AL Sbjct: 113 TAAKLATYFQRRGLRTAVICADTFRAGAYDQLKALCDRQGIFFYGEKGNENAPEVAKNGLEATKK--YDVRIVDTAGRHALESDLIQEMKDIHAVVNADHKLLVMDAAIGQQASEQARAFNEAVGITGVIITKLDGTAKGGGAL 254
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_THEAC (Signal recognition 54 kDa protein OS=Thermoplasma acidophilum GN=srp54 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.502e-21 Identity = 54/141 (38.30%), Postives = 80/141 (56.74%), Query Frame = 2 Query: 17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439 K A + KKG L+ AD R A+DQLKQ A++ FYG +E DPVR+ G+E K + + I+DTSGR +A LF+E+R++ EA PD V+ ++D+++G ++ +I+TK DG GG AL Sbjct: 116 KLARFFAKKGLNSGLIAADVHRYAAYDQLKQIASEVNAKFYGDQSEKDPVRLIKHGLEQLK--DVAVKIIDTSGRDSMDAELFDEIRRIKEAVAPDEVLMIIDATMGQQAGPEAKAFNDAIGVTGIIITKMDGTAKGGGAL 254
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_METS3 (Signal recognition 54 kDa protein OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=srp54 PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 2.561e-21 Identity = 54/141 (38.30%), Postives = 80/141 (56.74%), Query Frame = 2 Query: 17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439 K Y QKKG+ PA+VC DT+R A++QL+Q + ++P YG D + +A +G++ FK N +II DT+GRHKQE L EM + + P I V+D +IG + G++I+TK DG+ GG A+ Sbjct: 118 KLCRYLQKKGFNPAVVCTDTWRPAAYEQLRQLTEEMQVPLYGDPDNKDALDLAQKGLKEFK--NRKVIIFDTAGRHKQEEDLIAEMDTLDDIIQPTESILVIDGTIGQQAGEQAKAFSQATDVGSIIITKLDGSAKGGGAM 256
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_UNCMA (Signal recognition 54 kDa protein OS=Uncultured methanogenic archaeon RC-I GN=srp54 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 5.706e-21 Identity = 56/144 (38.89%), Postives = 78/144 (54.17%), Query Frame = 2 Query: 8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439 + K A Y +KG KPA++CADT+R GA+DQLKQ K + FYG D V I G++ K D+ IVDT+GRH E L +EM+ + T D + V+D++IG ++ V++TK DG GG AL Sbjct: 113 TSAKIARYFARKGLKPAVICADTYRPGAYDQLKQLCDKLGVGFYGEAGNKDAVAIVRNGLKEMAK--YDVKIVDTAGRHALETDLIQEMKDIYGLTKFDHKLLVLDAAIGQQASEQARAFNDAIGITGVVITKLDGTAKGGGAL 254
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_HALMA (Signal recognition 54 kDa protein OS=Haloarcula marismortui GN=srp54 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 5.706e-21 Identity = 52/144 (36.11%), Postives = 82/144 (56.94%), Query Frame = 2 Query: 8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439 + K A++ KG +PA++ DT R GA+DQ K+ A +A++ FYG E DPV+IA +G+E EN D+ IVDT+GR L E++ ++ + PD + V+D+++G ++ V++TK DG GG AL Sbjct: 113 TAAKMAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEA--TENADVRIVDTAGRDGLNEELIEQIERIEQEVQPDRDLLVLDAAMGQSAKSQAADFEAAIGIDGVVITKLDGTAKGGGAL 254
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_ARCFU (Signal recognition 54 kDa protein OS=Archaeoglobus fulgidus GN=srp54 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.660e-20 Identity = 54/141 (38.30%), Postives = 79/141 (56.03%), Query Frame = 2 Query: 17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439 K A Y + +G K A+V ADT+R A++QL+Q A + I FYG E D V+I +E K D+II+DT+GRH E L +EM +++E PD + V+D++IG ++ +I+TK DG GG AL Sbjct: 112 KMAKYFKDRGMKVAVVAADTWRPAAYEQLRQLAEEYGITFYGEKGEKDAVKIVKNALEKLKDH--DMIIIDTAGRHALEDELIDEMIKIAEVARPDYKLLVLDAAIGQLASKQAQAFHEAIGINGIIITKFDGTAKGGGAL 250
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_METST (Signal recognition 54 kDa protein OS=Methanosphaera stadtmanae (strain DSM 3091) GN=srp54 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 4.830e-20 Identity = 52/141 (36.88%), Postives = 81/141 (57.45%), Query Frame = 2 Query: 17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439 K + +KKG A+VC DT+R A++QL+Q +P +G D + +A +G+E + D+I+VDT+GRHK+E L +EM ++S+ PD VI V+D +IG + G++IV+K DG+ GG AL Sbjct: 118 KLVKHLKKKGHTSAIVCTDTWRPAAYEQLRQLTEPLDVPVFGDPENKDAIDLAKKGLEKCGSKY-DVILVDTAGRHKEEKDLLDEMAELSQIVQPDEVILVIDGTIGQQARSQAETFKKTTDIGSIIVSKLDGSAKGGGAL 257 The following BLAST results are available for this feature:
BLAST of EY744470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744470 ID=EY744470; Name=EY744470; organism=Citrus sinensis; type=EST; length=1035bpback to top |