EY744470

Overview
NameEY744470
Unique NameEY744470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1035
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_METBF (Signal recognition 54 kDa protein OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=srp54 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.740e-22
Identity = 61/144 (42.36%), Postives = 75/144 (52.08%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            S  K A Y Q+KG K  +V ADTFR GA+ QLK    K  + FYG     D V I   G++  +K   D+ IVDT+GRH  EA L EEM Q++    PD    V+D+ IG            SV    VI+TK DG   GG AL
Sbjct:  113 STAKLARYFQRKGLKAGVVAADTFRPGAYHQLKTLCEKLNVAFYGEENNPDAVEITRNGLKALEKY--DVKIVDTAGRHALEADLIEEMEQINAVAKPDHKFMVLDAGIGQQASQQAHAFNDSVGITGVIITKLDGTAKGGGAL 254          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_PYRAR (Signal recognition 54 kDa protein OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=srp54 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 8.803e-22
Identity = 57/144 (39.58%), Postives = 79/144 (54.86%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +  K A Y  K+G+K  +V  DT R  AFDQL+Q A K   PFYG     D V IA  GV   K    D++I+DT+GRH+ E AL +E++ + +A NPD V+ V+D+++G             +    VI+TK D    GG AL
Sbjct:  115 TSAKLARYLMKRGYKVGMVETDTIRPAAFDQLRQLAEKIGAPFYGERDGKDAVEIARRGVANLK--GVDVLIIDTAGRHRNEEALLQEVKAIYDAVNPDEVVLVVDATVGKLAAAQAEAFMKYLPIHTVIITKMDSTARGGGAL 256          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_METAC (Signal recognition 54 kDa protein OS=Methanosarcina acetivorans GN=srp54 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 8.803e-22
Identity = 61/144 (42.36%), Postives = 75/144 (52.08%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            S  K A Y Q+KG K  +V ADTFR GA+ QLK  A K  + FYG     D V I   G++  +K   D+ IVDT+GRH  EA L EEM ++     PD    V+D+ IG            SV    VI+TK DG   GG AL
Sbjct:  113 SAAKLARYFQRKGLKAGVVAADTFRPGAYHQLKTLAEKLNVGFYGEEGNPDAVEITKNGLKALEKY--DIRIVDTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSVGITGVIITKLDGTAKGGGAL 254          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_METTP (Signal recognition 54 kDa protein OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=srp54 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.150e-21
Identity = 58/144 (40.28%), Postives = 80/144 (55.56%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +  K A Y Q++G + A++CADTFRAGA+DQLK    +  I FYG     +   +A  G+E  KK   D+ IVDT+GRH  E+ L +EM+ +    N D  + VMD++IG            +V    VI+TK DG   GG AL
Sbjct:  113 TAAKLATYFQRRGLRTAVICADTFRAGAYDQLKALCDRQGIFFYGEKGNENAPEVAKNGLEATKK--YDVRIVDTAGRHALESDLIQEMKDIHAVVNADHKLLVMDAAIGQQASEQARAFNEAVGITGVIITKLDGTAKGGGAL 254          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_THEAC (Signal recognition 54 kDa protein OS=Thermoplasma acidophilum GN=srp54 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.502e-21
Identity = 54/141 (38.30%), Postives = 80/141 (56.74%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K A +  KKG    L+ AD  R  A+DQLKQ A++    FYG  +E DPVR+   G+E  K  +  + I+DTSGR   +A LF+E+R++ EA  PD V+ ++D+++G            ++    +I+TK DG   GG AL
Sbjct:  116 KLARFFAKKGLNSGLIAADVHRYAAYDQLKQIASEVNAKFYGDQSEKDPVRLIKHGLEQLK--DVAVKIIDTSGRDSMDAELFDEIRRIKEAVAPDEVLMIIDATMGQQAGPEAKAFNDAIGVTGIIITKMDGTAKGGGAL 254          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_METS3 (Signal recognition 54 kDa protein OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=srp54 PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.561e-21
Identity = 54/141 (38.30%), Postives = 80/141 (56.74%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K   Y QKKG+ PA+VC DT+R  A++QL+Q   + ++P YG     D + +A +G++ FK  N  +II DT+GRHKQE  L  EM  + +   P   I V+D +IG            +   G++I+TK DG+  GG A+
Sbjct:  118 KLCRYLQKKGFNPAVVCTDTWRPAAYEQLRQLTEEMQVPLYGDPDNKDALDLAQKGLKEFK--NRKVIIFDTAGRHKQEEDLIAEMDTLDDIIQPTESILVIDGTIGQQAGEQAKAFSQATDVGSIIITKLDGSAKGGGAM 256          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_UNCMA (Signal recognition 54 kDa protein OS=Uncultured methanogenic archaeon RC-I GN=srp54 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.706e-21
Identity = 56/144 (38.89%), Postives = 78/144 (54.17%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +  K A Y  +KG KPA++CADT+R GA+DQLKQ   K  + FYG     D V I   G++   K   D+ IVDT+GRH  E  L +EM+ +   T  D  + V+D++IG            ++    V++TK DG   GG AL
Sbjct:  113 TSAKIARYFARKGLKPAVICADTYRPGAYDQLKQLCDKLGVGFYGEAGNKDAVAIVRNGLKEMAK--YDVKIVDTAGRHALETDLIQEMKDIYGLTKFDHKLLVLDAAIGQQASEQARAFNDAIGITGVVITKLDGTAKGGGAL 254          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_HALMA (Signal recognition 54 kDa protein OS=Haloarcula marismortui GN=srp54 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.706e-21
Identity = 52/144 (36.11%), Postives = 82/144 (56.94%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +  K A++   KG +PA++  DT R GA+DQ K+ A +A++ FYG   E DPV+IA +G+E    EN D+ IVDT+GR      L E++ ++ +   PD  + V+D+++G            ++    V++TK DG   GG AL
Sbjct:  113 TAAKMAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEA--TENADVRIVDTAGRDGLNEELIEQIERIEQEVQPDRDLLVLDAAMGQSAKSQAADFEAAIGIDGVVITKLDGTAKGGGAL 254          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_ARCFU (Signal recognition 54 kDa protein OS=Archaeoglobus fulgidus GN=srp54 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.660e-20
Identity = 54/141 (38.30%), Postives = 79/141 (56.03%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K A Y + +G K A+V ADT+R  A++QL+Q A +  I FYG   E D V+I    +E  K    D+II+DT+GRH  E  L +EM +++E   PD  + V+D++IG            ++    +I+TK DG   GG AL
Sbjct:  112 KMAKYFKDRGMKVAVVAADTWRPAAYEQLRQLAEEYGITFYGEKGEKDAVKIVKNALEKLKDH--DMIIIDTAGRHALEDELIDEMIKIAEVARPDYKLLVLDAAIGQLASKQAQAFHEAIGINGIIITKFDGTAKGGGAL 250          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_METST (Signal recognition 54 kDa protein OS=Methanosphaera stadtmanae (strain DSM 3091) GN=srp54 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.830e-20
Identity = 52/141 (36.88%), Postives = 81/141 (57.45%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K   + +KKG   A+VC DT+R  A++QL+Q      +P +G     D + +A +G+E    +  D+I+VDT+GRHK+E  L +EM ++S+   PD VI V+D +IG            +   G++IV+K DG+  GG AL
Sbjct:  118 KLVKHLKKKGHTSAIVCTDTWRPAAYEQLRQLTEPLDVPVFGDPENKDAIDLAKKGLEKCGSKY-DVILVDTAGRHKEEKDLLDEMAELSQIVQPDEVILVIDGTIGQQARSQAETFKKTTDIGSIIVSKLDGSAKGGGAL 257          
The following BLAST results are available for this feature:
BLAST of EY744470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
SRP54_METBF6.740e-2242.36Signal recognition 54 kDa protein OS=Methanosarcin... [more]
SRP54_PYRAR8.803e-2239.58Signal recognition 54 kDa protein OS=Pyrobaculum a... [more]
SRP54_METAC8.803e-2242.36Signal recognition 54 kDa protein OS=Methanosarcin... [more]
SRP54_METTP1.150e-2140.28Signal recognition 54 kDa protein OS=Methanosaeta ... [more]
SRP54_THEAC1.502e-2138.30Signal recognition 54 kDa protein OS=Thermoplasma ... [more]
SRP54_METS32.561e-2138.30Signal recognition 54 kDa protein OS=Methanobrevib... [more]
SRP54_UNCMA5.706e-2138.89Signal recognition 54 kDa protein OS=Uncultured me... [more]
SRP54_HALMA5.706e-2136.11Signal recognition 54 kDa protein OS=Haloarcula ma... [more]
SRP54_ARCFU1.660e-2038.30Signal recognition 54 kDa protein OS=Archaeoglobus... [more]
SRP54_METST4.830e-2036.88Signal recognition 54 kDa protein OS=Methanosphaer... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-H12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744470 ID=EY744470; Name=EY744470; organism=Citrus sinensis; type=EST; length=1035bp
CCACGCGTCCGGTACAAAATATGCTTATTATCATCAAAAGAAAGGTTGGA
AACCGGCTTTAGTCTGTGCTGATACATTCAGAGCTGGTGCTTTTGATCAG
TTGAAGCAGAATGCCACCAAAGCTAAGATTCCATTTTATGGAAGCTACAC
AGAGTCTGATCCTGTGAGAATTGCAGTGGAAGGTGTGGAAACATTTAAAA
AGGAAAACTGTGATCTCATAATTGTTGATACCAGTGGTCGCCATAAACAG
GAAGCTGCTCTTTTTGAAGAGATGCGTCAAGTTTCTGAAGCAACGAATCC
AGATCTTGTTATATTTGTTATGGATAGCAGTATTGGTCAAGCCGCATTTG
ATCAAGCTCAAGCATTCAAGCAAAGTGTTTCTGCTGGAGCTGTGATTGTT
ACTAAAACGGATGGCAATGGGTGGGGTGGGGAAGCTCTTCGCGCCCACGC
CGCCCCCGCGCACTCCCCAGACCACCCCCAGCCGAGCGCAGACGTCTCAG
GGCCTGGTGCTCGCGCCGGCCAAAGGCCCCCCACCGATCACCTAAGCACG
AGAAGCTCGTCAAAGCGCTCCTCACAAAACAAAGGCCCCCACCCGAACCA
CGCCCCACACCCGCCGGGCCGCAACGGCGTACACTGCTCCCCACCAACCC
ACGGTCGGTCGTAACCCACGAAGACAGAACACCACAAAGACCACGGACAG
GCGACCGCAGCGACCGAAACCCTCGGTCCGCACGCGCCCGGCGCGCGACC
GCGCGCGCGCCGCGCACCCCCCAGCGGGCCTGCAGACCGACAGCGCCCAC
ACAGACGCGGCGGCGCGCACCGCAGCACGACAGCGCAAGGCGCCACACCC
CAGCTGAGCCGCCGCCGCCCGCAGGACGGGCCGCCCAACGCCTCGCGCCC
CTCCCCCCCGTCACGACACCTCCGCGGCGCCACCGATCCACCCTGCACCC
GCGGCCACGAGCCCCCGCCGCCCACCTCGGTGCAGCCGCTCGCCCCCGCC
CANCGACCCCCACCCCGGCTGCCGCCGCTGTGCCC
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