EY744470

Overview
NameEY744470
Unique NameEY744470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1035
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_HAEIN (Signal recognition particle protein OS=Haemophilus influenzae GN=ffh PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.258e-12
Identity = 42/130 (32.31%), Postives = 66/130 (50.77%), Query Frame = 2
Query:   50 KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K  +V AD +R  A  QL+  A    + F+ S  + +PV IA   +   K +  D++IVDT+GR   +  + +E++QV  A NP   +F +D+  G            ++    VI+TK DG+  GG AL
Sbjct:  131 KVLVVSADVYRPAAIKQLETLAQSVGVDFFPSDVKQNPVDIAKSALADAKLKFYDVLIVDTAGRLHVDTEMMDEIKQVHAALNPIETLFTVDAMTGQDAANTAKAFNEALPLTGVILTKVDGDARGGAAL 260          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_ECOLI (Signal recognition particle protein OS=Escherichia coli (strain K12) GN=ffh PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.840e-11
Identity = 41/138 (29.71%), Postives = 70/138 (50.72%), Query Frame = 2
Query:   26 YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +  +K   K  +V AD +R  A  QL+  A +  + F+ S     PV I    ++  K +  D+++VDT+GR   + A+ +E++QV  + NP   +FV+D+  G            ++    V++TK DG+  GG AL
Sbjct:  123 FLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAAL 260          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_ECOL6 (Signal recognition particle protein OS=Escherichia coli O6 GN=ffh PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.840e-11
Identity = 41/138 (29.71%), Postives = 70/138 (50.72%), Query Frame = 2
Query:   26 YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +  +K   K  +V AD +R  A  QL+  A +  + F+ S     PV I    ++  K +  D+++VDT+GR   + A+ +E++QV  + NP   +FV+D+  G            ++    V++TK DG+  GG AL
Sbjct:  123 FLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAAL 260          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_ECO57 (Signal recognition particle protein OS=Escherichia coli O157:H7 GN=ffh PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.840e-11
Identity = 41/138 (29.71%), Postives = 70/138 (50.72%), Query Frame = 2
Query:   26 YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +  +K   K  +V AD +R  A  QL+  A +  + F+ S     PV I    ++  K +  D+++VDT+GR   + A+ +E++QV  + NP   +FV+D+  G            ++    V++TK DG+  GG AL
Sbjct:  123 FLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAAL 260          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_BUCAP (Signal recognition particle protein OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ffh PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.840e-11
Identity = 43/142 (30.28%), Postives = 70/142 (49.30%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPAL-VCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K A + ++K  K  L V  D +RA A  QL+  + + KI FY S T   P+ I  E +E  K +  DL+++DT+GR      +  E+  +   + P   + ++DS +G            S+S   +++TKTD +   G AL
Sbjct:  119 KLAKWIKEKYKKKILTVSTDIYRAAAIKQLQILSDQVKIDFYLSDTTQTPINITKEAIEHAKLKLYDLLLIDTAGRLHINTEMMNEINTIQNISKPIETLLIVDSMMGQDAINIAKKFSASLSISGIVITKTDSDARSGVAL 260          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: FTSY_THEAQ (Cell division protein ftsY OS=Thermus aquaticus GN=ftsY PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 4.099e-11
Identity = 46/144 (31.94%), Postives = 62/144 (43.06%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA------TNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGG 430
            K   Y+Q  G K      DTFRA    QL +   +  IP       +DP  +A + V+  K    DL+ VDT+GR   +  L EE+++V  A        P  V  V+D+  G            +V    VIVTK DG   GG
Sbjct:  121 KLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAMKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAKKFHEAVGLTGVIVTKLDGTAKGG 264          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: FTSY_SYNY3 (Cell division protein ftsY homolog OS=Synechocystis sp. (strain PCC 6803) GN=ftsY PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.353e-11
Identity = 39/148 (26.35%), Postives = 77/148 (52.03%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEM---RQVSEATNPDLVI---FVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K A+  ++ G+   +  ADTFRA A +Q+K    ++ +P   +  ++ DP  +  +G+   +  N +L++VDT+GR + +  L +E+   R++ +   P+  +    V+D+++G            +     V++TK DG+  GG AL
Sbjct:  320 KLAFMAKQSGYDCVIAAADTFRAAAVEQVKVWGERSGVPVIANPGQNTDPAAVVYDGISAAQSRNVNLLLVDTAGRLQNKKNLMDELAKIRRIIDKKAPNATVESLLVLDATLGQNGLRQAEVFAEAAKLSGVVLTKLDGSAKGGVAL 467          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: FTSY_BACSU (Cell division protein ftsY homolog OS=Bacillus subtilis GN=ftsY PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 9.131e-11
Identity = 43/149 (28.86%), Postives = 69/149 (46.31%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEM--------RQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K A+  +++G    L   DTFRAGA +QL+    +  +P       SDP  +  + V   K  N D++I DT+GR + +  L +E+        R+V EA  P  V+  +D++ G            + +   + +TK DG   GG  L
Sbjct:  139 KLAHKMKQEGKSVVLAAGDTFRAGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEA--PHEVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVL 285          
The following BLAST results are available for this feature:
BLAST of EY744470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
SRP54_HAEIN8.258e-1232.31Signal recognition particle protein OS=Haemophilus... [more]
SRP54_ECOLI1.840e-1129.71Signal recognition particle protein OS=Escherichia... [more]
SRP54_ECOL61.840e-1129.71Signal recognition particle protein OS=Escherichia... [more]
SRP54_ECO571.840e-1129.71Signal recognition particle protein OS=Escherichia... [more]
SRP54_BUCAP1.840e-1130.28Signal recognition particle protein OS=Buchnera ap... [more]
FTSY_THEAQ4.099e-1131.94Cell division protein ftsY OS=Thermus aquaticus GN... [more]
FTSY_SYNY35.353e-1126.35Cell division protein ftsY homolog OS=Synechocysti... [more]
FTSY_BACSU9.131e-1128.86Cell division protein ftsY homolog OS=Bacillus sub... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-H12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744470 ID=EY744470; Name=EY744470; organism=Citrus sinensis; type=EST; length=1035bp
CCACGCGTCCGGTACAAAATATGCTTATTATCATCAAAAGAAAGGTTGGA
AACCGGCTTTAGTCTGTGCTGATACATTCAGAGCTGGTGCTTTTGATCAG
TTGAAGCAGAATGCCACCAAAGCTAAGATTCCATTTTATGGAAGCTACAC
AGAGTCTGATCCTGTGAGAATTGCAGTGGAAGGTGTGGAAACATTTAAAA
AGGAAAACTGTGATCTCATAATTGTTGATACCAGTGGTCGCCATAAACAG
GAAGCTGCTCTTTTTGAAGAGATGCGTCAAGTTTCTGAAGCAACGAATCC
AGATCTTGTTATATTTGTTATGGATAGCAGTATTGGTCAAGCCGCATTTG
ATCAAGCTCAAGCATTCAAGCAAAGTGTTTCTGCTGGAGCTGTGATTGTT
ACTAAAACGGATGGCAATGGGTGGGGTGGGGAAGCTCTTCGCGCCCACGC
CGCCCCCGCGCACTCCCCAGACCACCCCCAGCCGAGCGCAGACGTCTCAG
GGCCTGGTGCTCGCGCCGGCCAAAGGCCCCCCACCGATCACCTAAGCACG
AGAAGCTCGTCAAAGCGCTCCTCACAAAACAAAGGCCCCCACCCGAACCA
CGCCCCACACCCGCCGGGCCGCAACGGCGTACACTGCTCCCCACCAACCC
ACGGTCGGTCGTAACCCACGAAGACAGAACACCACAAAGACCACGGACAG
GCGACCGCAGCGACCGAAACCCTCGGTCCGCACGCGCCCGGCGCGCGACC
GCGCGCGCGCCGCGCACCCCCCAGCGGGCCTGCAGACCGACAGCGCCCAC
ACAGACGCGGCGGCGCGCACCGCAGCACGACAGCGCAAGGCGCCACACCC
CAGCTGAGCCGCCGCCGCCCGCAGGACGGGCCGCCCAACGCCTCGCGCCC
CTCCCCCCCGTCACGACACCTCCGCGGCGCCACCGATCCACCCTGCACCC
GCGGCCACGAGCCCCCGCCGCCCACCTCGGTGCAGCCGCTCGCCCCCGCC
CANCGACCCCCACCCCGGCTGCCGCCGCTGTGCCC
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