EY744463

Overview
NameEY744463
Unique NameEY744463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length966
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744463 vs. ExPASy Swiss-Prot
Match: CSLC5_ARATH (Probable xyloglucan glycosyltransferase 5 OS=Arabidopsis thaliana GN=CSLC5 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.590e-14
Identity = 32/82 (39.02%), Postives = 55/82 (67.07%), Query Frame = 3 
Query:   15 TFSFYCVVLPLTILVPEVQVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEAGRANEWVVTE 260
            +F+ +C++LPLT+ VPE ++P+W   YIP  ++ LN + +P+S   +  ++LFEN MS+ +  A   GL + G + EW+VT+
Sbjct:  503 SFTLFCIILPLTMFVPEAELPVWVICYIPVFMSFLNLLPSPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTK 584
[Close]
BLAST of EY744463 vs. ExPASy Swiss-Prot
Match: CSLC6_ARATH (Probable xyloglucan glycosyltransferase 6 OS=Arabidopsis thaliana GN=CSLC6 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.364e-13
Identity = 35/82 (42.68%), Postives = 52/82 (63.41%), Query Frame = 3 
Query:   15 TFSFYCVVLPLTILVPEVQVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEAGRANEWVVTE 260
            +F+ +CV+LPLT+  PE  +P W   YIP I++ILN +  PRS   +  ++LFEN MS+ +  A   GL +   + EWVVT+
Sbjct:  497 SFTLFCVILPLTMFFPEANLPSWVVCYIPGIMSILNIIPAPRSFPFIVPYLLFENTMSVTKFGAMISGLFKFDSSYEWVVTK 578
The following BLAST results are available for this feature:
BLAST of EY744463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
CSLC5_ARATH3.590e-1439.02Probable xyloglucan glycosyltransferase 5 OS=Arabi... [more]
CSLC6_ARATH1.364e-1342.68Probable xyloglucan glycosyltransferase 6 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-H05-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744463 ID=EY744463; Name=EY744463; organism=Citrus sinensis; type=EST; length=966bp
CCACGCGTCCGGTCACATTTTCCTTCTATTGCGTCGTGCTTCCGCTAACC
ATTCTGGTTCCTGAAGTTCAAGTTCCAATCTGGGGAGCTGTTTATATTCC
TTCCATAATCACCATTCTAAACTCAGTTGGAACTCCAAGGTCTATTCACC
TATTGTTTTACTGGATTCTTTTTGAGAATGTGATGTCTTTGCATCGAACC
AAGGCCACATTTATTGGTCTGCTCGAAGCTGGAAGGGCCAATGAATGGGT
TGTCACCGAAAAACTTGGAGATGCTCTCAAGAATAAGGCAGCTGATGCGA
AGAACAAAACAAATACCAAAGCTCCCAAAAAACCTAAAATCAAATTTGCT
GACAGAATGCATACTTTGGAGCTGGGATTTGGAGTGTTCCTCTTCTTCTG
CGGACGCTATGATTTTGCCCATGGGAAAAACAATTACTTCATATACCTCT
TCCTCCAAACAATTACCTCTTTGATCCTCACGATTCGGGCTACTCTGCCA
CCCTTGTCTAGTGCCACCAATCCCCCGGTCACATACCAATCAACACCGAG
AACAAAGCCTCTCTAATCTGCCCCCGGCCCTCCTCACTCCAATACAAGCA
CTACACAAACCACCACCGCCCCCGCCCCAGACGAAGAGAGCACATCCGCA
ACACACCGCCTCAGAAAGCCGAAGCAAAACAAAGGGACCACCCACACAAA
TTTCCGACGCAATAACAGCAAAAATCACAACGACACACACAAAACCAGAA
CAAGGAAGAACAGCCCGCAAACTCGCAATCTCACAAGATCCCAGAACGAA
AAACAGCCACGCCGTAAAACACTAACCTCGCACAGAAACCCTGCAGCACA
ACCCACCACCATCCGCCCCGCGGACTCGCTCGGGCTATACCACCCTCTTC
AATGCTCACACGCCTACACTATCACCCAAGCATGTGCCAAAACCCATCAN
CCGGATGGATGACGAA
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