EY744461

Overview
NameEY744461
Unique NameEY744461
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU1_PASMU (Elongation factor Tu-A OS=Pasteurella multocida GN=tufA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.465e-11
Identity = 45/155 (29.03%), Postives = 78/155 (50.32%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            I EP+R  D+P  LP++DV+ I G GTV  GRVE G+++ G  V       TT+  V  VEM  + L E   G+NVG  ++    ++++RG V +      P    +F S+V +++   + G  + P    +        +++   I++  G ++
Sbjct:  200 IPEPQRAIDQPFLLPIEDVFSISGRGTVVTGRVERGIIRTGEEVEIVGIKATTKTTVTGVEMFRKLLDEGRAGENVGALLRGTKREEIERGQVLAKPGSITPH--TDFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU1_BARQU (Elongation factor Tu 1 OS=Bartonella quintana GN=tuf1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.465e-11
Identity = 43/125 (34.40%), Postives = 67/125 (53.60%), Query Frame = 3
Query:   36 LDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQ 398
            +DN I  P+RP D+P  LP++DV+ I G GTV  GRVE GV+K G    ++   P+  TT V  VEM  + L +   GDN+G  ++ V  + ++RG V +      P       + ++  +  G+
Sbjct:  193 VDNYIPTPERPVDQPFLLPIEDVFSISGRGTVVTGRVERGVIKVGEEIEIIGIRPTSKTT-VTGVEMFRKLLDQGQAGDNIGALLRGVDREGIERGQVLAKPGSVTPHTRFKAEAYILTKDEGGR 316          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_SYNSC (Elongation factor Tu OS=Synechococcus sp. (strain CC9605) GN=tuf PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 41/116 (35.34%), Postives = 61/116 (52.59%), Query Frame = 3
Query:   42 NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIM 383
            +I EP+R  DKP  + ++DV+ I G GTV  GR+E G++K G  +       T  T V  VEM  + L E + GDNVG  ++ +  +D++RG V        P     F  QV ++
Sbjct:  199 SIPEPEREVDKPFLMAVEDVFSITGRGTVATGRIERGIVKVGEEIEIVGIKDTRKTTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVLVKPGSITPH--TKFEGQVYVL 312          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS9 (Elongation factor Tu OS=Synechococcus sp. (strain CC9902) GN=tuf PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 41/116 (35.34%), Postives = 61/116 (52.59%), Query Frame = 3
Query:   42 NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIM 383
            +I EP+R  DKP  + ++DV+ I G GTV  GR+E G++K G  + V        T V  VEM  + L E + GDNVG  ++ +  +D++RG V        P     F  QV ++
Sbjct:  199 SIPEPEREVDKPFLMAIEDVFSITGRGTVATGRIERGIVKVGEEVEVVGIRDPRKTTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVLVKPGSITPH--TKFEGQVYVL 312          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS3 (Elongation factor Tu OS=Synechococcus sp. (strain CC9311) GN=tuf PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 41/116 (35.34%), Postives = 61/116 (52.59%), Query Frame = 3
Query:   42 NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIM 383
            +I EP+R  DKP  + ++DV+ I G GTV  GR+E G++K G  + V        T V  VEM  + L E + GDNVG  ++ +  +D++RG V        P     F  QV ++
Sbjct:  199 SIPEPEREVDKPFLMAIEDVFSITGRGTVATGRIERGIVKVGEEVEVVGIREPRKTTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVLVKPGSITPH--TKFEGQVYVL 312          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_STAS1 (Elongation factor Tu OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=tuf PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 45/158 (28.48%), Postives = 76/158 (48.10%), Query Frame = 3
Query:   39 DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            D I  P+R SDKP  +P++DV+ I G GTV  GRVE G +K G    ++        T V  VEM  + L  A  GDN+G  ++ V+  D++RG V +      P     F + V +++     G  + P    +        +++  ++++  G ++
Sbjct:  198 DFIPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQIKVGEEIEIIGMQEESSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVSRDDVQRGQVLAAPGTITPH--TKFKADVYVLSK--DEGGRHTPFFTNYRPQFYFRTTDVTGVVNLPEGTEM 351          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_STAAW (Elongation factor Tu OS=Staphylococcus aureus (strain MW2) GN=tuf PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 48/157 (30.57%), Postives = 77/157 (49.04%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            I  P+R SDKP  +P++DV+ I G GTV  GRVE G +K G  V     GL     T V  VEM  + L  A  GDN+G  ++ VA +D++RG V +      P     F ++V +++     G  + P    +        +++  ++ +  G ++
Sbjct:  200 IPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQIKVGEEVEI--IGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPH--TEFKAEVYVLSK--DEGGRHTPFFSNYRPQFYFRTTDVTGVVHLPEGTEM 350          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_STAAT (Elongation factor Tu OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=tuf PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 48/157 (30.57%), Postives = 77/157 (49.04%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            I  P+R SDKP  +P++DV+ I G GTV  GRVE G +K G  V     GL     T V  VEM  + L  A  GDN+G  ++ VA +D++RG V +      P     F ++V +++     G  + P    +        +++  ++ +  G ++
Sbjct:  200 IPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQIKVGEEVEI--IGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPH--TEFKAEVYVLSK--DEGGRHTPFFSNYRPQFYFRTTDVTGVVHLPEGTEM 350          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_STAAS (Elongation factor Tu OS=Staphylococcus aureus (strain MSSA476) GN=tuf PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 48/157 (30.57%), Postives = 77/157 (49.04%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            I  P+R SDKP  +P++DV+ I G GTV  GRVE G +K G  V     GL     T V  VEM  + L  A  GDN+G  ++ VA +D++RG V +      P     F ++V +++     G  + P    +        +++  ++ +  G ++
Sbjct:  200 IPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQIKVGEEVEI--IGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPH--TEFKAEVYVLSK--DEGGRHTPFFSNYRPQFYFRTTDVTGVVHLPEGTEM 350          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_STAAR (Elongation factor Tu OS=Staphylococcus aureus (strain MRSA252) GN=tuf PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 48/157 (30.57%), Postives = 77/157 (49.04%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            I  P+R SDKP  +P++DV+ I G GTV  GRVE G +K G  V     GL     T V  VEM  + L  A  GDN+G  ++ VA +D++RG V +      P     F ++V +++     G  + P    +        +++  ++ +  G ++
Sbjct:  200 IPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQIKVGEEVEI--IGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPH--TEFKAEVYVLSK--DEGGRHTPFFSNYRPQFYFRTTDVTGVVHLPEGTEM 350          
The following BLAST results are available for this feature:
BLAST of EY744461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU1_PASMU2.465e-1129.03Elongation factor Tu-A OS=Pasteurella multocida GN... [more]
EFTU1_BARQU2.465e-1134.40Elongation factor Tu 1 OS=Bartonella quintana GN=t... [more]
EFTU_SYNSC3.219e-1135.34Elongation factor Tu OS=Synechococcus sp. (strain ... [more]
EFTU_SYNS93.219e-1135.34Elongation factor Tu OS=Synechococcus sp. (strain ... [more]
EFTU_SYNS33.219e-1135.34Elongation factor Tu OS=Synechococcus sp. (strain ... [more]
EFTU_STAS13.219e-1128.48Elongation factor Tu OS=Staphylococcus saprophytic... [more]
EFTU_STAAW3.219e-1130.57Elongation factor Tu OS=Staphylococcus aureus (str... [more]
EFTU_STAAT3.219e-1130.57Elongation factor Tu OS=Staphylococcus aureus (str... [more]
EFTU_STAAS3.219e-1130.57Elongation factor Tu OS=Staphylococcus aureus (str... [more]
EFTU_STAAR3.219e-1130.57Elongation factor Tu OS=Staphylococcus aureus (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-H03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744461 ID=EY744461; Name=EY744461; organism=Citrus sinensis; type=EST; length=878bp
CCACGCGTCCGCCCACGCGTCCGCCCACCCGTCCGCTTGACAATATCAAT
GAGCCGAAGAGGCCCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGT
GTACAAGATTGGTGGCATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCG
GTGTCCTCAAGCCTGGTATGGTGGTGACATTTGGCCCCTCTGGATTGACA
ACTGAGGTTAAGTCTGTTGAGATGCACCACGAAGCTCTGCAGGAGGCCCT
TCCGGGTGACAATGTTGGCTTCAACGTGAAGAACGTTGCTGTCAAGGATC
TCAAGCGTGGTTTTGTTGCTTCCGACTCCAAGGATGATCCACCCAGGGAA
GCTGCCAACTTCACCTCACAGGTCATCATCATGAACCACCCTGGCCAGAT
TGGAAATGGATATGCCCCAGTGCTTGACTGCCACACCTCCCACATTGCCG
TCGAGTTTTCTGAGCTCGTGACGATCATTGATATGCGATCAGGTAAGGAT
CTTGAAATCGAGCCAAAGTTCTTGAAGAATGGAGATGCTGGAATGGTTAA
GATGATTCCCGCCCTGCCAATGGTTGATGAACGCTTCTCTGACTACCCAC
CTCTTGGGTCCTTTTGCCGTTAGGGAAAATGCCCCTAACTGGTGCTGTTG
GGGGTGATTAAGAAGGTTGAAAAAAAGGATCCACACGGGGCCCGGGCCCC
CAATTCTGCCACCAAAAAAAAATGAGGATTTTTTTGGGGATCTTTTCTGC
TAAGTTACCTTTTTTTTTTCTCTGTTTTAGCTAATTTTTGAGCGAGTTTA
AATTTTGTTTTAAGGGAACTTTTTTTTTAATTTCCCTAAAATTTAGTTTT
TACGTTTAAAAGTATTTTCTTTGCGGAC
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