EY744461

Overview
NameEY744461
Unique NameEY744461
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_BORAP (Elongation factor Tu OS=Borrelia afzelii (strain PKo) GN=tuf PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 40/92 (43.48%), Postives = 53/92 (57.61%), Query Frame = 3
Query:   54 PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVAS 323
            P+R  DKP  L ++DV+ I G GTV  GR+E GV+K G  V       T  T V  VEM  + L++   GDNVG  ++ V  KD++RG V S
Sbjct:  204 PERDIDKPFLLAVEDVFSISGRGTVATGRIERGVIKVGQEVEIVGIKETRKTTVTGVEMFQKILEQGQAGDNVGLLLRGVDKKDIERGQVLS 295          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_BARHE (Elongation factor Tu OS=Bartonella henselae GN=tuf1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 46/160 (28.75%), Postives = 79/160 (49.38%), Query Frame = 3
Query:   36 LDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            +DN I  P+RP D+P  +P++DV+ I G GTV  GRVE GV+K G    ++   P+  TT V  VEM  + L +   GDN+G  ++ +  + ++RG V +      P     F ++  I+      G  + P    +        +++  I+ +  G ++
Sbjct:  193 VDNYIPTPERPVDQPFLMPIEDVFSISGRGTVVTGRVERGVIKVGEEVEIIGIRPTSKTT-VTGVEMFRKLLDQGQAGDNIGALLRGIDREGIERGQVLAKPASVTPH--TRFKAEAYILTK--DEGGRHTPFFTNYRPQFYFRTTDVTGIVTLPEGTEM 347          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_BACLD (Elongation factor Tu OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=tuf PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 44/156 (28.21%), Postives = 78/156 (50.00%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            I  P+R +DKP  +P++DV+ I G GTV  GRVE G +K G    ++        T V  VEM  + L  A  GDN+G  ++ V+ ++++RG V +      P +   F ++V +++   + G  + P    +        +++  II +  G ++
Sbjct:  201 IPTPERETDKPFMMPVEDVFSITGRGTVATGRVERGQVKVGDEVEIIGLQEENKKTTVTGVEMFRKLLDYAEAGDNIGALLRGVSREEIQRGQVLAQPGTITPHK--KFKAEVYVLSK--EEGGRHTPFFSNYRPQFYFRTTDVTGIIQLPEGVEM 352          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_AZOSB (Elongation factor Tu OS=Azoarcus sp. (strain BH72) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 46/156 (29.49%), Postives = 77/156 (49.36%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            I  P+R  DKP  LP++DV+ I G GTV  GRVE G++K G    +V   P+  TT    VEM  + L +   GDNVG  ++    +D++RG V        P    +FT ++ +++   + G  + P  + +        +++   I +  G ++
Sbjct:  202 IPTPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEIEIVGIKPTVKTT-CTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLCKPGSITPH--THFTGEIYVLSK--EEGGRHTPFFNNYRPQFYFRTTDVTGSISLPEGTEM 352          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_ANAMM (Elongation factor Tu OS=Anaplasma marginale (strain St. Maries) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 50/158 (31.65%), Postives = 78/158 (49.37%), Query Frame = 3
Query:   36 LDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-MVVTFGPSGL-TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            L+ I  P R  DKP  + ++DV+ I G GTV  GR+E GV+K G  V   G   L +T    VEM H+AL+    GDN G  ++ +  +D++RG V   S     R    F ++V I+    + G  + P    +     V  +++   I + SG ++
Sbjct:  196 LEKIELPVREKDKPFLMSVEDVFSIPGRGTVVTGRIERGVIKVGDKVDIVGLRDLQSTVCTGVEMFHKALETGEAGDNAGILLRGIKKEDVERGQVL--SAPGQIRSYKAFKAEVYILKK--EEGGRHTPFFSNYQPQFYVRTTDVTGSIKLPSGVEM 349          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU2_DESPS (Elongation factor Tu 2 OS=Desulfotalea psychrophila GN=tuf2 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 43/139 (30.94%), Postives = 68/139 (48.92%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQ---IGNGYAPVLDCHTSHI 446
            I EP+R  D+P  +P++DV+ I G GTV  GRVE G++K G  + +      + T    VEM  + L E   GDN+G  ++ V  +D++RG V +      P         ++  +  G+     NGY P     T+ +
Sbjct:  202 IPEPERDVDQPFLMPVEDVFSISGRGTVATGRVERGIIKVGEEVAIVGVKDTVKTTCTGVEMFRKLLDEGRAGDNIGALLRGVKREDIERGQVLAKPGTITPHTKFKAECYILGKDEGGRHTPFFNGYRPQFYFRTTDV 340          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU1_DESPS (Elongation factor Tu 1 OS=Desulfotalea psychrophila GN=tuf1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 46/141 (32.62%), Postives = 70/141 (49.65%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQ---IGNGYAPVLDCHTSHI 446
            I EP+R  D+P  +P++DV+ I G GTV  GRVE G++K G  V     G+   VK+    VEM  + L E   GDN+G  ++ V  +D++RG V +      P         ++  +  G+     NGY P     T+ +
Sbjct:  202 IPEPERDVDQPFLMPVEDVFSISGRGTVATGRVERGIIKVGEEVAI--VGVRDTVKTTCTGVEMFRKLLDEGRAGDNIGALLRGVKREDIERGQVLAKPGTITPHTKFKAECYILGKDEGGRHTPFFNGYRPQFYFRTTDV 340          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_UREU1 (Elongation factor Tu OS=Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) GN=tuf PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 48/154 (31.17%), Postives = 76/154 (49.35%), Query Frame = 3
Query:   54 PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            P+R +DKP  L ++DV+ I G GTV  GRVE G LK    V     GL     T V  +EM  ++L +A  GDN G  ++ +  +D++RG V        P     FT++V I+    + G  + P++  +        +++   I + +G DL
Sbjct:  203 PERSTDKPFLLAIEDVFTISGRGTVVTGRVERGTLKVNDEVEI--VGLKDTQKTVVTGIEMFRKSLDQAEAGDNAGILLRGIKKEDVERGQVLVKPGSIKPHR--TFTAKVYILKK--EEGGRHTPIVSGYRPQFYFRTTDVTGAISLPAGVDL 350          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_TAXOC (Elongation factor Tu OS=Taxeobacter ocellatus GN=tuf PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 41/153 (26.80%), Postives = 76/153 (49.67%), Query Frame = 3
Query:   54 PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL---KPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            P R +D+P  +P++DV+ I G GTV  GR+E GV+   +P  ++  G   L + V  VEM  + L     GDNVG  ++ +  + ++RG V        P +   F ++V +++   + G  + P  + +        +++  II +  G ++
Sbjct:  203 PPRLTDQPFLMPVEDVFSITGRGTVATGRIERGVINSGEPVEILGMGAENLKSTVTGVEMFRKILDRGEAGDNVGLLLRGIEKEAIRRGMVICKPGSVTPHK--KFKAEVYVLSK--EEGGRHTPFFNNYRPQFYFRTTDVTGIISLAEGVEM 351          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_STRSY (Elongation factor Tu OS=Streptococcus suis (strain 05ZYH33) GN=tuf PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 47/156 (30.13%), Postives = 74/156 (47.44%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            I EP+R +DKPL LP++DV+ I G GTV  GR++ G ++      +V          V  VEM  + L E L GDNVG  ++ V   +++RG V S      P     F  +V I+    + G  + P  D +        +++   I +  G ++
Sbjct:  203 IPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVRVNDEIEIVGLQEEKSKAVVTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVISKPGSINPH--TKFKGEVYILTK--EEGGRHTPFFDNYRPQFYFRTTDVTGSIKLPEGTEM 354          
The following BLAST results are available for this feature:
BLAST of EY744461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_BORAP3.219e-1143.48Elongation factor Tu OS=Borrelia afzelii (strain P... [more]
EFTU_BARHE3.219e-1128.75Elongation factor Tu OS=Bartonella henselae GN=tuf... [more]
EFTU_BACLD3.219e-1128.21Elongation factor Tu OS=Bacillus licheniformis (st... [more]
EFTU_AZOSB3.219e-1129.49Elongation factor Tu OS=Azoarcus sp. (strain BH72)... [more]
EFTU_ANAMM3.219e-1131.65Elongation factor Tu OS=Anaplasma marginale (strai... [more]
EFTU2_DESPS3.219e-1130.94Elongation factor Tu 2 OS=Desulfotalea psychrophil... [more]
EFTU1_DESPS3.219e-1132.62Elongation factor Tu 1 OS=Desulfotalea psychrophil... [more]
EFTU_UREU14.204e-1131.17Elongation factor Tu OS=Ureaplasma urealyticum ser... [more]
EFTU_TAXOC4.204e-1126.80Elongation factor Tu OS=Taxeobacter ocellatus GN=t... [more]
EFTU_STRSY4.204e-1130.13Elongation factor Tu OS=Streptococcus suis (strain... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-H03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744461 ID=EY744461; Name=EY744461; organism=Citrus sinensis; type=EST; length=878bp
CCACGCGTCCGCCCACGCGTCCGCCCACCCGTCCGCTTGACAATATCAAT
GAGCCGAAGAGGCCCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGT
GTACAAGATTGGTGGCATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCG
GTGTCCTCAAGCCTGGTATGGTGGTGACATTTGGCCCCTCTGGATTGACA
ACTGAGGTTAAGTCTGTTGAGATGCACCACGAAGCTCTGCAGGAGGCCCT
TCCGGGTGACAATGTTGGCTTCAACGTGAAGAACGTTGCTGTCAAGGATC
TCAAGCGTGGTTTTGTTGCTTCCGACTCCAAGGATGATCCACCCAGGGAA
GCTGCCAACTTCACCTCACAGGTCATCATCATGAACCACCCTGGCCAGAT
TGGAAATGGATATGCCCCAGTGCTTGACTGCCACACCTCCCACATTGCCG
TCGAGTTTTCTGAGCTCGTGACGATCATTGATATGCGATCAGGTAAGGAT
CTTGAAATCGAGCCAAAGTTCTTGAAGAATGGAGATGCTGGAATGGTTAA
GATGATTCCCGCCCTGCCAATGGTTGATGAACGCTTCTCTGACTACCCAC
CTCTTGGGTCCTTTTGCCGTTAGGGAAAATGCCCCTAACTGGTGCTGTTG
GGGGTGATTAAGAAGGTTGAAAAAAAGGATCCACACGGGGCCCGGGCCCC
CAATTCTGCCACCAAAAAAAAATGAGGATTTTTTTGGGGATCTTTTCTGC
TAAGTTACCTTTTTTTTTTCTCTGTTTTAGCTAATTTTTGAGCGAGTTTA
AATTTTGTTTTAAGGGAACTTTTTTTTTAATTTCCCTAAAATTTAGTTTT
TACGTTTAAAAGTATTTTCTTTGCGGAC
back to top