EY744461

Overview
NameEY744461
Unique NameEY744461
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_SALPB (Elongation factor Tu OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 48/157 (30.57%), Postives = 78/157 (49.68%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V     G+    KS    VEM  + L E   G+NVG  ++ +  ++++RG V   +K    +    F S+V I++     G  + P    +        +++   I++  G ++
Sbjct:  200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_SALPA (Elongation factor Tu OS=Salmonella paratyphi A GN=tuf1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 48/157 (30.57%), Postives = 78/157 (49.68%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V     G+    KS    VEM  + L E   G+NVG  ++ +  ++++RG V   +K    +    F S+V I++     G  + P    +        +++   I++  G ++
Sbjct:  200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_SALCH (Elongation factor Tu OS=Salmonella choleraesuis GN=tuf1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 48/157 (30.57%), Postives = 78/157 (49.68%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V     G+    KS    VEM  + L E   G+NVG  ++ +  ++++RG V   +K    +    F S+V I++     G  + P    +        +++   I++  G ++
Sbjct:  200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_SALAR (Elongation factor Tu OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 48/157 (30.57%), Postives = 78/157 (49.68%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V     G+    KS    VEM  + L E   G+NVG  ++ +  ++++RG V   +K    +    F S+V I++     G  + P    +        +++   I++  G ++
Sbjct:  200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_NOCSJ (Elongation factor Tu OS=Nocardioides sp. (strain BAA-499 / JS614) GN=tuf PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 41/156 (26.28%), Postives = 78/156 (50.00%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            I  P+R ++KP  +P++DV+ I G GTV  GR+E G++K G    ++    +   + V  VEM  + L E   G+NVG  ++    +D++RG V +      P    NF + V I++   + G  + P  + +        +++  ++ +  G ++
Sbjct:  202 IPTPERDTEKPFLMPVEDVFTITGRGTVITGRIERGIVKVGEEVEILGIREASQKSTVTGVEMFRKLLDEGQAGENVGLLLRGTKREDVERGMVVAKPGTTTPH--TNFEASVYILSK--EEGGRHTPFFNNYRPQFYFRTTDVTGVVTLPEGTEM 353          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_NOCFA (Elongation factor Tu OS=Nocardia farcinica GN=tuf PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 41/158 (25.95%), Postives = 74/158 (46.84%), Query Frame = 3
Query:   39 DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            ++I +P R +DKP  +P++DV+ I G GTV  GRVE G++       +    P    T V  +EM  + L +   GDNVG  ++ +  +D++RG V        P     F  Q  I++     G  + P  + +        +++  ++ +  G ++
Sbjct:  199 ESIPDPVRETDKPFLMPIEDVFTITGRGTVVTGRVERGIINVNEEVEITGIRPETTKTTVTGIEMFRKLLDQGQAGDNVGLLIRGIKREDVERGQVVIKPGTTTPH--TEFEGQAYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGVVTLPEGTEM 352          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_FRAP2 (Elongation factor Tu OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=tuf PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 54/155 (34.84%), Postives = 73/155 (47.10%), Query Frame = 3
Query:   39 DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQ---IGNGYAPVLDCHTSHI--AVEFSELVTII 479
            D I  P+R + KP  LP++DV+ I G GTV  GR+E GV+  G    VV   P+  TT V  VEM  + L +   GDNVG  V+ +   D++RG V        P         V+     G+      GY P     T+ I  AVE  E V ++
Sbjct:  198 DYIPAPERDTAKPFILPIEDVFSISGRGTVVTGRIERGVINVGDEVEVVGIRPTQKTT-VTGVEMFRKLLDKGEAGDNVGILVRGLKRDDVERGQVLCKPGSIKPHTKFEAEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDITGAVELPEGVEMV 351          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_ECOLI (Elongation factor Tu OS=Escherichia coli (strain K12) GN=tufA PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 48/157 (30.57%), Postives = 78/157 (49.68%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V     G+    KS    VEM  + L E   G+NVG  ++ +  ++++RG V   +K    +    F S+V I++     G  + P    +        +++   I++  G ++
Sbjct:  200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_ECOL6 (Elongation factor Tu OS=Escherichia coli O6 GN=tufA PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 48/157 (30.57%), Postives = 78/157 (49.68%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V     G+    KS    VEM  + L E   G+NVG  ++ +  ++++RG V   +K    +    F S+V I++     G  + P    +        +++   I++  G ++
Sbjct:  200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_ECO57 (Elongation factor Tu OS=Escherichia coli O157:H7 GN=tufA PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 48/157 (30.57%), Postives = 78/157 (49.68%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V     G+    KS    VEM  + L E   G+NVG  ++ +  ++++RG V   +K    +    F S+V I++     G  + P    +        +++   I++  G ++
Sbjct:  200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350          
The following BLAST results are available for this feature:
BLAST of EY744461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_SALPB4.204e-1130.57Elongation factor Tu OS=Salmonella paratyphi B (st... [more]
EFTU_SALPA4.204e-1130.57Elongation factor Tu OS=Salmonella paratyphi A GN=... [more]
EFTU_SALCH4.204e-1130.57Elongation factor Tu OS=Salmonella choleraesuis GN... [more]
EFTU_SALAR4.204e-1130.57Elongation factor Tu OS=Salmonella arizonae (strai... [more]
EFTU_NOCSJ4.204e-1126.28Elongation factor Tu OS=Nocardioides sp. (strain B... [more]
EFTU_NOCFA4.204e-1125.95Elongation factor Tu OS=Nocardia farcinica GN=tuf ... [more]
EFTU_FRAP24.204e-1134.84Elongation factor Tu OS=Francisella philomiragia s... [more]
EFTU_ECOLI4.204e-1130.57Elongation factor Tu OS=Escherichia coli (strain K... [more]
EFTU_ECOL64.204e-1130.57Elongation factor Tu OS=Escherichia coli O6 GN=tuf... [more]
EFTU_ECO574.204e-1130.57Elongation factor Tu OS=Escherichia coli O157:H7 G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-H03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744461 ID=EY744461; Name=EY744461; organism=Citrus sinensis; type=EST; length=878bp
CCACGCGTCCGCCCACGCGTCCGCCCACCCGTCCGCTTGACAATATCAAT
GAGCCGAAGAGGCCCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGT
GTACAAGATTGGTGGCATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCG
GTGTCCTCAAGCCTGGTATGGTGGTGACATTTGGCCCCTCTGGATTGACA
ACTGAGGTTAAGTCTGTTGAGATGCACCACGAAGCTCTGCAGGAGGCCCT
TCCGGGTGACAATGTTGGCTTCAACGTGAAGAACGTTGCTGTCAAGGATC
TCAAGCGTGGTTTTGTTGCTTCCGACTCCAAGGATGATCCACCCAGGGAA
GCTGCCAACTTCACCTCACAGGTCATCATCATGAACCACCCTGGCCAGAT
TGGAAATGGATATGCCCCAGTGCTTGACTGCCACACCTCCCACATTGCCG
TCGAGTTTTCTGAGCTCGTGACGATCATTGATATGCGATCAGGTAAGGAT
CTTGAAATCGAGCCAAAGTTCTTGAAGAATGGAGATGCTGGAATGGTTAA
GATGATTCCCGCCCTGCCAATGGTTGATGAACGCTTCTCTGACTACCCAC
CTCTTGGGTCCTTTTGCCGTTAGGGAAAATGCCCCTAACTGGTGCTGTTG
GGGGTGATTAAGAAGGTTGAAAAAAAGGATCCACACGGGGCCCGGGCCCC
CAATTCTGCCACCAAAAAAAAATGAGGATTTTTTTGGGGATCTTTTCTGC
TAAGTTACCTTTTTTTTTTCTCTGTTTTAGCTAATTTTTGAGCGAGTTTA
AATTTTGTTTTAAGGGAACTTTTTTTTTAATTTCCCTAAAATTTAGTTTT
TACGTTTAAAAGTATTTTCTTTGCGGAC
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