EY744461

Overview
NameEY744461
Unique NameEY744461
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_CORDI (Elongation factor Tu OS=Corynebacterium diphtheriae GN=tuf PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 43/158 (27.22%), Postives = 74/158 (46.84%), Query Frame = 3
Query:   39 DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            D+I +P+R +DKP  +P++D++ I G GTV  GRVE G LK      ++       TT V  +EM  + L     GDN G  ++ V  +D++RG V        P     F   V +++     G  + P  D +        +++  ++ +  G ++
Sbjct:  199 DSIPDPERETDKPFLMPIEDIFTITGRGTVVTGRVERGSLKVNEDVEIIGIREKATTTTVTGIEMFRKLLDYTEAGDNCGLLLRGVKREDVERGQVVVKPGAYTPH--TEFEGSVYVLSK--DEGGRHTPFFDNYRPQFYFRTTDVTGVVKLPEGTEM 352          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_CLONN (Elongation factor Tu OS=Clostridium novyi (strain NT) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 50/166 (30.12%), Postives = 79/166 (47.59%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIM-----NHPGQIGNGYAPVLDCHTSHI--AVEFSELVTIIDMRSGKDLEIE 512
            I  P+R +D+P  +P++DV+ I G GTV  GRVE GVL  G    +V        T +  VEM  + L EA+ GDN+G  ++ V   +++RG V +      P +   F  QV ++            NGY P     T+ +  ++   E V ++      D+ +E
Sbjct:  198 IPTPERATDQPFLMPVEDVFTITGRGTVATGRVERGVLHVGDEVQIVGMKEEIGKTTITGVEMFRKMLDEAMAGDNIGALLRGVQRDEIERGQVLAKPGSVTPHK--KFVGQVYVLKKEEGGRHTPFFNGYRPQFYFRTTDVTGSIALPEGVEMVMPGDHIDMNVE 361          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_CHLVU (Elongation factor Tu, chloroplastic OS=Chlorella vulgaris GN=tufA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 44/118 (37.29%), Postives = 64/118 (54.24%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMN 386
            I  P+R ++KP  + ++DV+ I G GTV  GRVE G +K G  V     GL    TT V  +EM  + L E++ GDNVG  ++ V   D++RG V +      P     F +QV ++N
Sbjct:  210 IPTPERETEKPFLMAVEDVFSITGRGTVATGRVERGCVKIGDTVEL--VGLRDTKTTTVTGLEMFQKTLDESVAGDNVGILLRGVQKIDIERGMVLAKPGSILPH--TKFEAQVYVLN 323          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_CAMFF (Elongation factor Tu OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=tuf PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 46/163 (28.22%), Postives = 76/163 (46.63%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFG--PSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDLEIEPKFLK 527
            I  P R +DK   +P++DV+ I G GTV  GR+E G++K G  +         TT V  VEM  + + +   GDNVG  ++    +D++RG V    K   P     F  +V I+    + G  + P  + +     V  +++   I +  G ++ +    LK
Sbjct:  205 IPTPVRATDKDFLMPIEDVFSISGRGTVVTGRIEKGIVKVGDTIEIVGIRDTQTTTVTGVEMFRKEMDQGEAGDNVGVLLRGTKKEDVERGMVLCKPKSITPH--TKFEGEVYILTK--EEGGRHTPFFNNYRPQFYVRTTDVTGSITLPEGTEMVMPGDNLK 363          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_BUCBP (Elongation factor Tu OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=tuf PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMN 386
            I EPKR  D+P  LP++DV+ I G GTV  GR+E G++K G  V     G+ + VK+    VEM  + L E   G+NVG  ++     D++RG V +      P     F S+V +++
Sbjct:  200 IPEPKRSIDQPFLLPIEDVFSISGRGTVVTGRIERGIIKVGEEVEI--VGIKSTVKTICTGVEMFRKLLDEGRAGENVGVLLRGTKRDDIERGQVLAKPGTITPH--IKFESEVYVLS 313          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_BOVIN (Elongation factor Tu, mitochondrial OS=Bos taurus GN=TUFM PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 56/182 (30.77%), Postives = 89/182 (48.90%), Query Frame = 3
Query:   54 PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF--GPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFS---ELVTIIDMRSGKDLEIEPKFLKNGDAGMVKMIPALPMVDER 584
            P R  +KP  LP++ VY I G GTV  G +E G+LK G    F      + T V  +EM H++L  A  GDN+G  V+ +  +DL+RG V +      P +     +QV I+    + G  + P +   +  + V FS   ++   I +  GK+L +  + LK      + +I   PM+ E+
Sbjct:  250 PTRDLEKPFLLPVESVYSIPGRGTVVTGTLERGILKKGDECEFLGHSKNIRTVVTGIEMFHKSLDRAEAGDNLGALVRGLKREDLRRGLVMAKPGSIQPHQKVE--AQVYILTK--EEGGRHKPFV---SHFMPVMFSLTWDMACRIILPPGKELAMPGEDLK------LTLILRQPMILEK 418          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_BORBZ (Elongation factor Tu OS=Borrelia burgdorferi (strain ZS7) GN=tuf PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 39/92 (42.39%), Postives = 53/92 (57.61%), Query Frame = 3
Query:   54 PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVAS 323
            P+R  DKP  L ++DV+ I G GTV  GR+E G++K G  V       T  T V  VEM  + L++   GDNVG  ++ V  KD++RG V S
Sbjct:  204 PERDIDKPFLLAVEDVFSISGRGTVATGRIERGIIKVGQEVEIVGIKETRKTTVTGVEMFQKILEQGQAGDNVGLLLRGVDKKDIERGQVLS 295          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_BORBU (Elongation factor Tu OS=Borrelia burgdorferi GN=tuf PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 39/92 (42.39%), Postives = 53/92 (57.61%), Query Frame = 3
Query:   54 PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVAS 323
            P+R  DKP  L ++DV+ I G GTV  GR+E G++K G  V       T  T V  VEM  + L++   GDNVG  ++ V  KD++RG V S
Sbjct:  204 PERDIDKPFLLAVEDVFSISGRGTVATGRIERGIIKVGQEVEIVGIKETRKTTVTGVEMFQKILEQGQAGDNVGLLLRGVDKKDIERGQVLS 295          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_BART1 (Elongation factor Tu OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 45/156 (28.85%), Postives = 76/156 (48.72%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            I  P+RP D+P  +P++DV+ I G GTV  GRVE GV+K G    ++   P+  TT V  VEM  + L +   GDN+G  ++ V  + ++RG V +      P     F ++  I+      G  + P    +        +++  I+ +  G ++
Sbjct:  197 IPTPERPVDQPFLMPIEDVFSISGRGTVVTGRVERGVIKVGEEIEIIGIRPTSKTT-VTGVEMFRKLLDQGQAGDNIGALLRGVDREGIERGQVLAKPGSVTPH--TRFKAEAYILTK--DEGGRHTPFFTNYRPQFYFRTTDVTGIVTLPEGTEM 347          
BLAST of EY744461 vs. ExPASy Swiss-Prot
Match: EFTU_AZOSE (Elongation factor Tu OS=Azoarcus sp. (strain EbN1) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 46/157 (29.30%), Postives = 78/157 (49.68%), Query Frame = 3
Query:   45 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASDSKDDPPREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVEFSELVTIIDMRSGKDL 503
            I  P+R  D+P  LP++DV+ I G GTV  GRVE G++K G  V     G+   VK+    VEM  + L +   GDNVG  ++    +D++RG V        P    +FT +V +++   + G  + P  + +        +++   I++  G ++
Sbjct:  202 IPTPERAIDRPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEI--VGIKATVKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLCKPGSIKPH--THFTGEVYVLSK--EEGGRHTPFFNNYRPQFYFRTTDVTGSIELPEGTEM 352          
The following BLAST results are available for this feature:
BLAST of EY744461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_CORDI4.204e-1127.22Elongation factor Tu OS=Corynebacterium diphtheria... [more]
EFTU_CLONN4.204e-1130.12Elongation factor Tu OS=Clostridium novyi (strain ... [more]
EFTU_CHLVU4.204e-1137.29Elongation factor Tu, chloroplastic OS=Chlorella v... [more]
EFTU_CAMFF4.204e-1128.22Elongation factor Tu OS=Campylobacter fetus subsp.... [more]
EFTU_BUCBP4.204e-1136.44Elongation factor Tu OS=Buchnera aphidicola subsp.... [more]
EFTU_BOVIN4.204e-1130.77Elongation factor Tu, mitochondrial OS=Bos taurus ... [more]
EFTU_BORBZ4.204e-1142.39Elongation factor Tu OS=Borrelia burgdorferi (stra... [more]
EFTU_BORBU4.204e-1142.39Elongation factor Tu OS=Borrelia burgdorferi GN=tu... [more]
EFTU_BART14.204e-1128.85Elongation factor Tu OS=Bartonella tribocorum (str... [more]
EFTU_AZOSE4.204e-1129.30Elongation factor Tu OS=Azoarcus sp. (strain EbN1)... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-H03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744461 ID=EY744461; Name=EY744461; organism=Citrus sinensis; type=EST; length=878bp
CCACGCGTCCGCCCACGCGTCCGCCCACCCGTCCGCTTGACAATATCAAT
GAGCCGAAGAGGCCCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGT
GTACAAGATTGGTGGCATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCG
GTGTCCTCAAGCCTGGTATGGTGGTGACATTTGGCCCCTCTGGATTGACA
ACTGAGGTTAAGTCTGTTGAGATGCACCACGAAGCTCTGCAGGAGGCCCT
TCCGGGTGACAATGTTGGCTTCAACGTGAAGAACGTTGCTGTCAAGGATC
TCAAGCGTGGTTTTGTTGCTTCCGACTCCAAGGATGATCCACCCAGGGAA
GCTGCCAACTTCACCTCACAGGTCATCATCATGAACCACCCTGGCCAGAT
TGGAAATGGATATGCCCCAGTGCTTGACTGCCACACCTCCCACATTGCCG
TCGAGTTTTCTGAGCTCGTGACGATCATTGATATGCGATCAGGTAAGGAT
CTTGAAATCGAGCCAAAGTTCTTGAAGAATGGAGATGCTGGAATGGTTAA
GATGATTCCCGCCCTGCCAATGGTTGATGAACGCTTCTCTGACTACCCAC
CTCTTGGGTCCTTTTGCCGTTAGGGAAAATGCCCCTAACTGGTGCTGTTG
GGGGTGATTAAGAAGGTTGAAAAAAAGGATCCACACGGGGCCCGGGCCCC
CAATTCTGCCACCAAAAAAAAATGAGGATTTTTTTGGGGATCTTTTCTGC
TAAGTTACCTTTTTTTTTTCTCTGTTTTAGCTAATTTTTGAGCGAGTTTA
AATTTTGTTTTAAGGGAACTTTTTTTTTAATTTCCCTAAAATTTAGTTTT
TACGTTTAAAAGTATTTTCTTTGCGGAC
back to top