EY744455

Overview
NameEY744455
Unique NameEY744455
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744455 vs. ExPASy Swiss-Prot
Match: YSH1_GIBZE (Endoribonuclease YSH1 OS=Gibberella zeae GN=YSH1 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.077e-17
Identity = 64/221 (28.96%), Postives = 111/221 (50.23%), Query Frame = 2
Query:   26 IILVHGESHEMGRLKTKLMTELAD--CDTKIITPKNCQSDKMYFNSDKMAKTIGRLA------------EKTP*FGETVTGILVKKGFTYQIMAPDDLRIFSQLSTANIT--QRITVPYSGAFGVIKYRLEQIY-----------------------------ESVESSTDEE--SGVPTLRVHNRVTLKHDSENHISMRWTSDPISDMVSYSVVPLVLNI 547
            +ILVHGE H M RLK+KL++  A+     K+ +P+NC+  ++ F +DK+AK +G+LA              TP     VTG+LV+  F   +MAP+DLR ++ L+T  IT  QR+T+  +G   ++K+ LE  +                             ES +   DEE  S V    V   V++++ +   + + W  + ++D ++ SV+ ++ ++
Sbjct:  492 VILVHGEQHNMMRLKSKLLSLNANKTAKVKVYSPRNCEELRIPFKADKIAKVVGKLACIQPPQSIHPDQTATP---PLVTGVLVQNDFKLSLMAPEDLREYAGLNTTTITCKQRLTLSAAGV-DLVKWALEGTFGNIEELPEMRRAKNGQNGHADKMITDGDDESKQEDADEEVASLVAAYLVMGCVSVRYRTNGEVELEWEGNMLNDGIADSVMAVLFSV 708          
BLAST of EY744455 vs. ExPASy Swiss-Prot
Match: YSH1_NEUCR (Endoribonuclease ysh-1 OS=Neurospora crassa GN=ysh-1 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.689e-16
Identity = 63/220 (28.64%), Postives = 108/220 (49.09%), Query Frame = 2
Query:   26 IILVHGESHEMGRLKTKLMTELADCD--TKIITPKNCQSDKMYFNSDKMAKTIGRLAEKTP*FGET----------------VTGILVKKGFTYQIMAPDDLRIFSQLSTANIT--QRITVPYSGAFGVIKYRLEQIYESVE---------------------SSTDEE-----SGVPTLRVHNRVTLKHDSENHISMRWTSDPISDMVSYSVVPLVLNI 547
            +ILVHGE H M RLK+KL++  A  +   K+ +P+NC+  ++ F +DK+AK +G+LA   P   E                 +TG+LV+  F   +MAP+DLR ++ L+T  I   QR+ +  +G   +IK+ LE  + +VE                        DEE       V    V   VT+++ +   + + W  + ++D ++ +V+ ++L I
Sbjct:  460 VILVHGEVHNMMRLKSKLLSLNATKEHKVKVFSPRNCEELRIPFKTDKVAKVVGKLASIPPSLKEAKTGHDGPLPSSTEPQLITGVLVQNDFKMSLMAPEDLREYAGLTTTTIACKQRLKLSAAG-IDLIKWGLEGTFGAVEELPEVKPKLEIVKSENGDTKMEEADEELPHGDDVVAAYLVMGCVTVRYRASGEVELEWEGNMLNDGIADAVMAVLLGI 678          
The following BLAST results are available for this feature:
BLAST of EY744455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
YSH1_GIBZE7.077e-1728.96Endoribonuclease YSH1 OS=Gibberella zeae GN=YSH1 P... [more]
YSH1_NEUCR2.689e-1628.64Endoribonuclease ysh-1 OS=Neurospora crassa GN=ysh... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-G09-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744455 ID=EY744455; Name=EY744455; organism=Citrus sinensis; type=EST; length=909bp
CCACGCGTCCGCTCATGCCTCCTAAATAATTCTTGTTCATGGAGAATCTC
ATGAGATGGGGAGGCTCAAAACAAAACTAATGACCGAATTAGCTGACTGC
GATACAAAAATTATCACCCCAAAGAACTGTCAGTCAGATAAAATGTATTT
TAACTCTGACAAAATGGCAAAAACTATTGGAAGGCTGGCTGAAAAAACGC
CATAATTTGGCGAAACTGTCACTGGCATACTTGTAAAGAAAGGTTTCACT
TACCAGATAATGGCTCCTGATGATCTTCGCATCTTCTCACAGCTATCGAC
AGCAAATATTACTCAGAGGATTACTGTCCCTTACTCAGGGGCCTTTGGTG
TGATAAAGTACCGGCTTGAGCAGATATACGAGAGTGTGGAGTCTTCTACA
GATGAGGAATCTGGGGTTCCTACTCTACGAGTGCACAATCGAGTGACTTT
GAAGCATGACTCAGAGAATCATATATCGATGCGTTGGACTTCAGATCCTA
TAAGTGACATGGTGTCATATTCTGTTGTACCATTGGTTCTAAACATCATT
CGGGACGTACCTAAGGTAGTTGTGGAATCCTAGGCCCATAAAACCTGAGT
GAATAAGGAGGGAAGAAAGGCGAAAAGGGTTTGCTGGCCCTGGCTGGCCC
CACTCTTTTGAACATGCAAAATTAAGAAGGCACCCGAAAAGGGGGGGTTA
CCCGTTCCTAGGGACATGGGCCCCCCTTGATAAGCATCACCGCAAAAGGT
CACAAAGCCTAATCGGCGCGCCCCTAGGAACCCAATTACAAACACCGTTT
TAAGCATAATTACGAAGGCGCGGCAAGAACCAACTACCACCCCCCCGGAA
ACGATCAAATGACGATCTCCCCCTCCACACACCTCTTTATTACGCCTTCT
ATCCTCATG
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