EY744421

Overview
NameEY744421
Unique NameEY744421
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length996
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX3Y_PANTR (ATP-dependent RNA helicase DDX3Y OS=Pan troglodytes GN=DDX3Y PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.026e-27
Identity = 65/131 (49.62%), Postives = 83/131 (63.36%), Query Frame = 1
Query:  211 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPR--------GSRTVYPSWLLFLPPQE 579
            EQ +    NTGINF+ Y+DIPVE +G N PP +  F +ID+GE +  NI+  +Y +PTPVQ+HAIPI  G RDLMACAQTGSGKTAAF  PI+S I  +   +  +        G R  YP  L+  P +E
Sbjct:  145 EQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFGDIDMGEIIMGNIQLTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRE 275          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX3Y_HUMAN (ATP-dependent RNA helicase DDX3Y OS=Homo sapiens GN=DDX3Y PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 1.026e-27
Identity = 65/131 (49.62%), Postives = 83/131 (63.36%), Query Frame = 1
Query:  211 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPR--------GSRTVYPSWLLFLPPQE 579
            EQ +    NTGINF+ Y+DIPVE +G N PP +  F++ID+GE +  NI   +Y +PTPVQ+HAIPI  G RDLMACAQTGSGKTAAF  PI+S I  +   +  +        G R  YP  L+  P +E
Sbjct:  145 EQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRE 275          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX4_RAT (Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus GN=Ddx4 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.065e-27
Identity = 59/123 (47.97%), Postives = 78/123 (63.41%), Query Frame = 1
Query:  211 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQE 579
            E  +     TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI +  Y K TPVQ+++IPI + GRDLMACAQTGSGKTAAF  PI++ +MR+  +   R      P  ++  P +E
Sbjct:  240 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIVAPTRE 361          

HSP 2 Score: 30.4166 bits (67), Expect = 2.065e-27
Identity = 24/69 (34.78%), Postives = 36/69 (52.17%), Query Frame = 3
Query:  558 LILAPTRELSSQIHV*SPRNFPNPTGVRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLIRVEK 764
            +I+APTREL +QI++   R F   T VR  V +       H +R+++ +G       P R M +I  EK
Sbjct:  354 IIVAPTRELINQIYL-EARKFSFGTCVRAVVIYGGTQFG-HSIRQIV-QGCNILCATPGRLMDIIGKEK 419          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX4_MOUSE (Probable ATP-dependent RNA helicase DDX4 OS=Mus musculus GN=Ddx4 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.689e-27
Identity = 59/123 (47.97%), Postives = 78/123 (63.41%), Query Frame = 1
Query:  211 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQE 579
            E  +     TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI +  Y K TPVQ+++IPI + GRDLMACAQTGSGKTAAF  PI++ +MR+  +   R      P  ++  P +E
Sbjct:  228 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIVAPTRE 349          

HSP 2 Score: 30.0314 bits (66), Expect = 2.689e-27
Identity = 24/69 (34.78%), Postives = 36/69 (52.17%), Query Frame = 3
Query:  558 LILAPTRELSSQIHV*SPRNFPNPTGVRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLIRVEK 764
            +I+APTREL +QI++   R F   T VR  V +       H +R+++ +G       P R M +I  EK
Sbjct:  342 IIVAPTRELINQIYL-EARKFSFGTCVRAVVIYGGTQFG-HSVRQIV-QGCNILCATPGRLMDIIGKEK 407          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX3_XENLA (Putative ATP-dependent RNA helicase an3 OS=Xenopus laevis GN=an3 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.090e-27
Identity = 64/139 (46.04%), Postives = 84/139 (60.43%), Query Frame = 1
Query:  187 PFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVYPSWLLFLPPQE 579
            P   +   EQ +    NTGINF+ Y+DIPVE +G N PP + +F ++ +GE +  NI+  +Y +PTPVQ+HAIPI I  RDLMACAQTGSGKTAAF  PI+S I        M+        G R  +P  L+  P +E
Sbjct:  180 PLAPNDRVEQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFHDVTMGEIIMGNIQLTRYTRPTPVQKHAIPIIIEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDAMKHLQENGRYGRRKQFPLSLVLAPTRE 318          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX4_BOVIN (Probable ATP-dependent RNA helicase DDX4 OS=Bos taurus GN=DDX4 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.927e-27
Identity = 60/123 (48.78%), Postives = 78/123 (63.41%), Query Frame = 1
Query:  211 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQE 579
            E  +     TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI +  Y K TPVQ+++IPI  GGRDLMACAQTGSGKTAAF  PI++ +MR+  +   R      P  ++  P +E
Sbjct:  257 EDSIFAHYQTGINFDKYDTILVEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIVAPTRE 378          

HSP 2 Score: 29.261 bits (64), Expect = 5.927e-27
Identity = 24/69 (34.78%), Postives = 36/69 (52.17%), Query Frame = 3
Query:  558 LILAPTRELSSQIHV*SPRNFPNPTGVRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLIRVEK 764
            +I+APTREL +QI++   R F   T VR  V +       H +R+++ +G       P R M +I  EK
Sbjct:  371 IIVAPTRELINQIYL-EARKFSFGTCVRAVVIYGGTQLG-HSIRQIV-QGCNILCATPGRLMDVIGKEK 436          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DED1_LODEL (ATP-dependent RNA helicase DED1 OS=Lodderomyces elongisporus GN=DED1 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.935e-27
Identity = 63/132 (47.73%), Postives = 83/132 (62.88%), Query Frame = 1
Query:  220 VAEE---ENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPR---------GSRTVYPSWLLFLPPQE 579
            VAE+   +++GINFD Y+DIPVE SGE VP  +N+F    L E L  NI+  ++ KPTPVQ++++PI   GRDLMACAQTGSGKT  F FP++S    E Y+  P           S  VYP+ L+  P +E
Sbjct:  142 VAEDTLFQSSGINFDNYDDIPVEASGEGVPEPINSFTAPPLDELLVENIKLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLS----ESYMNGPAPIPESTGAFSSHKVYPTILVMAPTRE 269          

HSP 2 Score: 25.7942 bits (55), Expect = 5.935e-27
Identity = 16/34 (47.06%), Postives = 21/34 (61.76%), Query Frame = 3
Query:  558 LILAPTRELSSQIHV*SP----RNFPNPTGVRGG 647
            L++APTREL SQI+  S     R++  P  V GG
Sbjct:  262 LVMAPTRELVSQIYDESKKFAYRSWVRPCVVYGG 295          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX3L_MOUSE (Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus GN=D1Pas1 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 6.648e-27
Identity = 63/131 (48.09%), Postives = 82/131 (62.60%), Query Frame = 1
Query:  211 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVYPSWLLFLPPQE 579
            EQ +    NTGINF+ Y+DIPVE +G N PP + +F+++++GE +  NI   +Y +PTPVQ+HAIPI    RDLMACAQTGSGKTAAF  PI+S I        +R        G R  YP  L+  P +E
Sbjct:  146 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRE 276          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX3X_MOUSE (ATP-dependent RNA helicase DDX3X OS=Mus musculus GN=Ddx3x PE=1 SV=3)

HSP 1 Score: 121.324 bits (303), Expect = 8.683e-27
Identity = 63/131 (48.09%), Postives = 82/131 (62.60%), Query Frame = 1
Query:  211 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVYPSWLLFLPPQE 579
            EQ +    NTGINF+ Y+DIPVE +G N PP + +F+++++GE +  NI   +Y +PTPVQ+HAIPI    RDLMACAQTGSGKTAAF  PI+S I        +R        G R  YP  L+  P +E
Sbjct:  147 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRE 277          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX3X_HUMAN (ATP-dependent RNA helicase DDX3X OS=Homo sapiens GN=DDX3X PE=1 SV=3)

HSP 1 Score: 121.324 bits (303), Expect = 8.683e-27
Identity = 63/131 (48.09%), Postives = 82/131 (62.60%), Query Frame = 1
Query:  211 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVYPSWLLFLPPQE 579
            EQ +    NTGINF+ Y+DIPVE +G N PP + +F+++++GE +  NI   +Y +PTPVQ+HAIPI    RDLMACAQTGSGKTAAF  PI+S I        +R        G R  YP  L+  P +E
Sbjct:  147 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRE 277          
The following BLAST results are available for this feature:
BLAST of EY744421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
DDX3Y_PANTR1.026e-2749.62ATP-dependent RNA helicase DDX3Y OS=Pan troglodyte... [more]
DDX3Y_HUMAN1.026e-2749.62ATP-dependent RNA helicase DDX3Y OS=Homo sapiens G... [more]
DDX4_RAT2.065e-2747.97Probable ATP-dependent RNA helicase DDX4 OS=Rattus... [more]
DDX4_MOUSE2.689e-2747.97Probable ATP-dependent RNA helicase DDX4 OS=Mus mu... [more]
DDX3_XENLA5.090e-2746.04Putative ATP-dependent RNA helicase an3 OS=Xenopus... [more]
DDX4_BOVIN5.927e-2748.78Probable ATP-dependent RNA helicase DDX4 OS=Bos ta... [more]
DED1_LODEL5.935e-2747.73ATP-dependent RNA helicase DED1 OS=Lodderomyces el... [more]
DDX3L_MOUSE6.648e-2748.09Putative ATP-dependent RNA helicase Pl10 OS=Mus mu... [more]
DDX3X_MOUSE8.683e-2748.09ATP-dependent RNA helicase DDX3X OS=Mus musculus G... [more]
DDX3X_HUMAN8.683e-2748.09ATP-dependent RNA helicase DDX3X OS=Homo sapiens G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-D10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744421 ID=EY744421; Name=EY744421; organism=Citrus sinensis; type=EST; length=996bp
CCACCAACCTCTTCTGAACCTCCTGCTTCGTCACGAGAATCTACTGAACC
TGCCAGTGGCCCCGGCTGGGGCAGTGGTTCGAGGCCCGATTTTGGGCGTG
GTCAGGGTTACGGCTCTGGTGGTAGAAGTGGCGGTGGTTGGAATAATAGA
AGTGGGGGTTGGGACCGAAGGGAACGTGAAGTGAACCCGTTTGGTGATGA
TGTTGGTGCAGAGCAGCCGGTTGCTGAAGAAGAAAACACGGGTATTAATT
TTGATGCTTATGAGGATATTCCAGTGGAGACAAGTGGAGAAAATGTGCCA
CCGGCAGTTAATACATTTGCAGAAATTGATTTGGGGGAAGCTTTGAATCT
TAATATTAGGAGGTGCAAGTATGTCAAACCGACGCCTGTTCAGCGTCATG
CGATTCCTATATCGATTGGTGGGCGAGATTTAATGGCCTGTGCTCAGACA
GGGTCGGGGAAGACAGCTGCCTTTTGTTTTCCAATTATTAGTGGGATTAT
GCGTGAGCAGTACGTACAGAGACCACGTGGATCGCGGACTGTTTATCCCT
CCTGGCTCTTATTCTTGCCCCCACAAGAGAACTCTCGTCTCAGATCCATG
TTTGAAGCCCCAGAAATTTTCCTAATCCAACTGGGGTCAGGGGGGGGGTT
GCTTTCCGAAGGAACCACCATTCAACCCACCATTTGCGAAAACTTTTAAA
AAAAGGGGTTGAATATTCCTTTGGCCAACCCCCGCGAAAAATGGGTTTGA
TTCGCGTTGAAAAAACCTAAAATTTCTCTTTGCAAAAAGATTAGAATCCT
TTACCGCTTCCAATGAAGGGCAGACGCGGAGGCTGGATATTGGGGGTTTT
TGGCCCCCCGCAACGCCAAACAATATTTGCTGCCCCACCAACGGGTCTTA
TGCCCTCCCCCCCACCTGTGGGTTACAAACAAAATAACAACGGGCTCTTT
TCTTCCGGGCTGCCCCACCTTCCTCCCTCACAAAAAAACAATACTA
back to top