EY744421

Overview
NameEY744421
Unique NameEY744421
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length996
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX4_HUMAN (Probable ATP-dependent RNA helicase DDX4 OS=Homo sapiens GN=DDX4 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 1.307e-26
Identity = 58/123 (47.15%), Postives = 77/123 (62.60%), Query Frame = 1
Query:  211 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQE 579
            E  +     TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI +  Y K TPVQ+++IPI + GRDLMACAQTGSGKTAAF  PI++ +M +  +   R      P  ++  P +E
Sbjct:  255 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASRFKELQEPECIIVAPTRE 376          

HSP 2 Score: 29.6462 bits (65), Expect = 1.307e-26
Identity = 24/69 (34.78%), Postives = 36/69 (52.17%), Query Frame = 3
Query:  558 LILAPTRELSSQIHV*SPRNFPNPTGVRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLIRVEK 764
            +I+APTREL +QI++   R F   T VR  V +       H +R+++ +G       P R M +I  EK
Sbjct:  369 IIVAPTRELVNQIYL-EARKFSFGTCVRAVVIYGGTQLG-HSIRQIV-QGCNILCATPGRLMDIIGKEK 434          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX4_PIG (Probable ATP-dependent RNA helicase DDX4 OS=Sus scrofa GN=DDX4 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.307e-26
Identity = 58/123 (47.15%), Postives = 77/123 (62.60%), Query Frame = 1
Query:  211 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQE 579
            E  +     TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI +  Y K TPVQ+++IPI + GRDLMACAQTGSGKTAAF  PI++ +M +  +   R      P  ++  P +E
Sbjct:  253 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASRFKELQEPECIIVAPTRE 374          

HSP 2 Score: 29.6462 bits (65), Expect = 1.307e-26
Identity = 24/69 (34.78%), Postives = 36/69 (52.17%), Query Frame = 3
Query:  558 LILAPTRELSSQIHV*SPRNFPNPTGVRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLIRVEK 764
            +I+APTREL +QI++   R F   T VR  V +       H +R+++ +G       P R M +I  EK
Sbjct:  367 IIVAPTRELVNQIYL-EARKFSFGTCVRAVVIYGGTQLG-HSIRQIV-QGCNILCATPGRLMDIIGKEK 432          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX3Y_MOUSE (ATP-dependent RNA helicase DDX3Y OS=Mus musculus GN=Ddx3y PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.934e-26
Identity = 63/131 (48.09%), Postives = 81/131 (61.83%), Query Frame = 1
Query:  211 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVYPSWLLFLPPQE 579
            EQ +    NTGINF+ Y+DIPVE +G N PP +  F++I++GE +  NI   +Y +PTPVQ+HAIPI    RDLMACAQTGSGKTAAF  PI+S I        ++        G R  YP  L+  P +E
Sbjct:  146 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIENFSDIEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRE 276          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DED1_NEUCR (ATP-dependent RNA helicase ded-1 OS=Neurospora crassa GN=ded-1 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.885e-26
Identity = 60/124 (48.39%), Postives = 78/124 (62.90%), Query Frame = 1
Query:  229 EENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGS-------RTVYPSWLLFLPPQE 579
            +++TGINF+ Y+DIPVE SG+NVP  V TF+   L   L  NI+  +Y  PTPVQ+++IPI +GGRDLMACAQTGSGKT  F FPI+S          P  +       R  YP+ L+  P +E
Sbjct:  167 KQHTGINFEKYDDIPVEASGDNVPEPVLTFSNPPLDNHLISNIQLARYNVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPILSQSFHTGPSPIPASAAGAYGRQRKAYPTALILAPTRE 290          

HSP 2 Score: 27.335 bits (59), Expect = 2.885e-26
Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3
Query:  555 ALILAPTRELSSQIH 599
            ALILAPTREL SQI+
Sbjct:  282 ALILAPTRELVSQIY 296          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: RH52A_ORYSJ (DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp. japonica GN=Os06g0602400 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.763e-26
Identity = 49/79 (62.03%), Postives = 62/79 (78.48%), Query Frame = 1
Query:  265 DIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIM 501
            DIPVE SGE+VPP  + F    L EA+  N+ RC Y  PTPVQR+++PI++ GRDLMACAQTGSGKTAAFC P++SG++
Sbjct:   69 DIPVEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMACAQTGSGKTAAFCLPVVSGLV 147          

HSP 2 Score: 31.5722 bits (70), Expect = 3.763e-26
Identity = 22/70 (31.43%), Postives = 38/70 (54.29%), Query Frame = 3
Query:  555 ALILAPTRELSSQIHV*SPRNFPNPTGVRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLIRVEK 764
            AL+LAPTREL++QI+    + F   TG+R  VA+       ++  + L++G +     P R + ++   K
Sbjct:  171 ALVLAPTRELAAQINE-EAKKFSFQTGLRVVVAY--GGTPMYNQLRDLERGADILVATPGRLVDMVERSK 237          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX3_DICDI (Probable ATP-dependent RNA helicase ddx3 OS=Dictyostelium discoideum GN=ddx3 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.885e-26
Identity = 62/124 (50.00%), Postives = 85/124 (68.55%), Query Frame = 1
Query:  229 EENTGINFDAYED--IPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQ-----RPRGSRTVYPSWLLFLPPQE 579
            ++N GI+F+AY+D  I +ETS E++   +N+FA++DLG+ L  NI+  KY KPTPVQ+ A+PI +  RDLMACAQTGSGKTAAF FPIISGI+ +   +     +P   R   P  L+  P +E
Sbjct:  219 DDNIGIDFNAYDDDDISIETS-EHICAPLNSFADVDLGDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAAFLFPIISGILLDGAPEAPPAYKPGVPRAACPRALVLAPTRE 341          

HSP 2 Score: 25.7942 bits (55), Expect = 4.885e-26
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  555 ALILAPTRELSSQI 596
            AL+LAPTREL+ QI
Sbjct:  333 ALVLAPTRELAQQI 346          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX4_MACFA (Probable ATP-dependent RNA helicase DDX4 OS=Macaca fascicularis GN=DDX4 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 8.272e-26
Identity = 53/99 (53.54%), Postives = 69/99 (69.70%), Query Frame = 1
Query:  211 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE 507
            E  +     TGI+FD Y+ I VE SG + PPA+ TF E +L + LN NI +  Y K TPVQ+++IPI + GRDLMACAQTGSGKTAAF  PI++ +M +
Sbjct:  256 EDSIFAHYQTGISFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHD 354          

HSP 2 Score: 29.6462 bits (65), Expect = 8.272e-26
Identity = 24/69 (34.78%), Postives = 36/69 (52.17%), Query Frame = 3
Query:  558 LILAPTRELSSQIHV*SPRNFPNPTGVRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLIRVEK 764
            +I+APTREL +QI++   R F   T VR  V +       H +R+++ +G       P R M +I  EK
Sbjct:  370 IIVAPTRELVNQIYL-EARKFSFGTCVRAVVIYGGTQLG-HSIRQIV-QGCNILCATPGRLMDIIGKEK 435          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DED1_MAGGR (ATP-dependent RNA helicase DED1 OS=Magnaporthe grisea GN=DED1 PE=3 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 8.282e-26
Identity = 60/126 (47.62%), Postives = 79/126 (62.70%), Query Frame = 1
Query:  229 EENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMR------EQYVQRPRG---SRTVYPSWLLFLPPQE 579
            +++TGINF+ Y+DIPVE SG +VP  V TF+   L + L  NI   +Y  PTPVQ++++PI +GGRDLMACAQTGSGKT  F FPI+S   +          Q P G    R  YP+ L+  P +E
Sbjct:  160 KQHTGINFEKYDDIPVEASGHDVPEPVYTFSNPPLDDHLISNIELARYKVPTPVQKYSVPIVMGGRDLMACAQTGSGKTGGFLFPILSQAFKTGPSPIPATNQGPGGYGRQRKAYPTSLILAPTRE 285          

HSP 2 Score: 26.9498 bits (58), Expect = 8.282e-26
Identity = 18/35 (51.43%), Postives = 22/35 (62.86%), Query Frame = 3
Query:  555 ALILAPTRELSSQIHV*SP----RNFPNPTGVRGG 647
            +LILAPTREL SQI+  S     R++  P  V GG
Sbjct:  277 SLILAPTRELVSQIYDESRKFAYRSWVRPCVVYGG 311          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DED1_EMENI (ATP-dependent RNA helicase ded1 OS=Emericella nidulans GN=ded1 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 8.283e-26
Identity = 60/124 (48.39%), Postives = 76/124 (61.29%), Query Frame = 1
Query:  229 EENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGS-------RTVYPSWLLFLPPQE 579
            ++NTGINF  Y+DIPVE SG +VP  VNTF    L + L  NI   +Y  PTPVQ+++IPI + GRDLMACAQTGSGKT  F FPI+S   +      P  +       R  YP+ L+  P +E
Sbjct:  159 KQNTGINFANYDDIPVEASGHDVPEPVNTFTNPPLDDHLISNIALARYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPILSQAYQNGPAAPPPSAAGQFGRQRKAYPTSLILAPTRE 282          

HSP 2 Score: 25.409 bits (54), Expect = 8.283e-26
Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  555 ALILAPTRELSSQI 596
            +LILAPTREL SQI
Sbjct:  274 SLILAPTRELVSQI 287          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DED1_CRYNE (ATP-dependent RNA helicase ded1 OS=Cryptococcus neoformans GN=DED1 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 8.289e-26
Identity = 57/123 (46.34%), Postives = 72/123 (58.54%), Query Frame = 1
Query:  238 TGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRP---------RGSRTVYPSWLLFLPPQE 579
            TGINFD Y DIPVE SG+ VP  V  F    +   L  N++  +Y  PTPVQ+++IPI   GRDLMACAQTGSGKT  F FPI+S +        P         R ++ VYP+ L+  P +E
Sbjct:  136 TGINFDKYADIPVEVSGKGVPEPVTEFTNPPINPVLLENVKYARYATPTPVQKYSIPIVADGRDLMACAQTGSGKTGGFLFPILSALFTYGPSTPPVEQDTGYGYRRTKKVYPTALVLAPTRE 258          

HSP 2 Score: 30.8018 bits (68), Expect = 8.289e-26
Identity = 18/34 (52.94%), Postives = 21/34 (61.76%), Query Frame = 3
Query:  555 ALILAPTRELSSQIHV*SPRNFPNPTGVRGGVAF 656
            AL+LAPTREL SQIH    R F   + VR  V +
Sbjct:  250 ALVLAPTRELVSQIHE-EARKFAYRSWVRPAVVY 282          
The following BLAST results are available for this feature:
BLAST of EY744421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
DDX4_HUMAN1.307e-2647.15Probable ATP-dependent RNA helicase DDX4 OS=Homo s... [more]
DDX4_PIG1.307e-2647.15Probable ATP-dependent RNA helicase DDX4 OS=Sus sc... [more]
DDX3Y_MOUSE1.934e-2648.09ATP-dependent RNA helicase DDX3Y OS=Mus musculus G... [more]
DED1_NEUCR2.885e-2648.39ATP-dependent RNA helicase ded-1 OS=Neurospora cra... [more]
RH52A_ORYSJ3.763e-2662.03DEAD-box ATP-dependent RNA helicase 52A OS=Oryza s... [more]
DDX3_DICDI4.885e-2650.00Probable ATP-dependent RNA helicase ddx3 OS=Dictyo... [more]
DDX4_MACFA8.272e-2653.54Probable ATP-dependent RNA helicase DDX4 OS=Macaca... [more]
DED1_MAGGR8.282e-2647.62ATP-dependent RNA helicase DED1 OS=Magnaporthe gri... [more]
DED1_EMENI8.283e-2648.39ATP-dependent RNA helicase ded1 OS=Emericella nidu... [more]
DED1_CRYNE8.289e-2646.34ATP-dependent RNA helicase ded1 OS=Cryptococcus ne... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-D10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744421 ID=EY744421; Name=EY744421; organism=Citrus sinensis; type=EST; length=996bp
CCACCAACCTCTTCTGAACCTCCTGCTTCGTCACGAGAATCTACTGAACC
TGCCAGTGGCCCCGGCTGGGGCAGTGGTTCGAGGCCCGATTTTGGGCGTG
GTCAGGGTTACGGCTCTGGTGGTAGAAGTGGCGGTGGTTGGAATAATAGA
AGTGGGGGTTGGGACCGAAGGGAACGTGAAGTGAACCCGTTTGGTGATGA
TGTTGGTGCAGAGCAGCCGGTTGCTGAAGAAGAAAACACGGGTATTAATT
TTGATGCTTATGAGGATATTCCAGTGGAGACAAGTGGAGAAAATGTGCCA
CCGGCAGTTAATACATTTGCAGAAATTGATTTGGGGGAAGCTTTGAATCT
TAATATTAGGAGGTGCAAGTATGTCAAACCGACGCCTGTTCAGCGTCATG
CGATTCCTATATCGATTGGTGGGCGAGATTTAATGGCCTGTGCTCAGACA
GGGTCGGGGAAGACAGCTGCCTTTTGTTTTCCAATTATTAGTGGGATTAT
GCGTGAGCAGTACGTACAGAGACCACGTGGATCGCGGACTGTTTATCCCT
CCTGGCTCTTATTCTTGCCCCCACAAGAGAACTCTCGTCTCAGATCCATG
TTTGAAGCCCCAGAAATTTTCCTAATCCAACTGGGGTCAGGGGGGGGGTT
GCTTTCCGAAGGAACCACCATTCAACCCACCATTTGCGAAAACTTTTAAA
AAAAGGGGTTGAATATTCCTTTGGCCAACCCCCGCGAAAAATGGGTTTGA
TTCGCGTTGAAAAAACCTAAAATTTCTCTTTGCAAAAAGATTAGAATCCT
TTACCGCTTCCAATGAAGGGCAGACGCGGAGGCTGGATATTGGGGGTTTT
TGGCCCCCCGCAACGCCAAACAATATTTGCTGCCCCACCAACGGGTCTTA
TGCCCTCCCCCCCACCTGTGGGTTACAAACAAAATAACAACGGGCTCTTT
TCTTCCGGGCTGCCCCACCTTCCTCCCTCACAAAAAAACAATACTA
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